all_m319_AAV28_RS09240_m4 |
AAV28_RS09240_m4 |
cluster_106 |
all |
30 |
20.79 |
141 |
TTGGATGC--------------GGTTCCC+ |
+GGGAACC--------------GCATCCAA |
|
|
all_m1526_AAV28_RS40400_m1 |
AAV28_RS40400_m1 |
cluster_24 |
all |
33 |
42.98 |
286 |
+GATATAAAATATAATATATTATATTTTATAT+ |
+ATATAAAATATAATATATTATATTTTATATC+ |
|
|
all_m92_AAV28_RS02555_m2 |
AAV28_RS02555_m2 |
cluster_146 |
all |
16 |
10.00 |
457 |
+CGGH------TCCT+ |
+AGGA------dCCG+ |
|
|
all_m490_AAV28_RS13260_m5 |
AAV28_RS13260_m5 |
cluster_204 |
all |
10 |
10.47 |
250 |
+CGGRGGAG+ |
+CTCCYCCG+ |
|
|
all_m792_AAV28_RS18460_m2 |
AAV28_RS18460_m2 |
cluster_24 |
all |
33 |
34.66 |
273 |
++TCATATAATATATTATATCAGATAA++++++ |
++++++TTATCTGATATAATATATTATATGA++ |
|
|
all_m1543_AAV28_RS41180_m3 |
AAV28_RS41180_m3 |
cluster_171 |
all |
13 |
13.86 |
173 |
GTCTGTTCCC+++ |
+++GGGAACAGAC |
|
|
all_m926_AAV28_RS22335_m1 |
AAV28_RS22335_m1 |
cluster_58 |
all |
17 |
14.21 |
276 |
GGTCCT------WTCGC |
GCGAw------AGGACC |
|
|
all_m36_AAV28_RS01975_m1 |
AAV28_RS01975_m1 |
cluster_60 |
all |
16 |
19.41 |
350 |
GCGACGAAACAATC++ |
++GATTGTTTCGTCGC |
|
|
all_m1152_AAV28_RS28625_m2 |
AAV28_RS28625_m2 |
cluster_1 |
all |
26 |
22.19 |
454 |
+++++ATATATAAWWTATATTA++++ |
++++TAATATAwwTTATATAT+++++ |
|
|
all_m186_AAV28_RS06245_m1 |
AAV28_RS06245_m1 |
cluster_149 |
all |
27 |
15.01 |
146 |
CCTCGG---------------DTCCGA |
TCGGAh---------------CCGAGG |
|
|
all_m643_AAV28_RS16200_m3 |
AAV28_RS16200_m3 |
cluster_102 |
all |
23 |
30.23 |
424 |
GAAGTGGAATTYMATTCCACTTC |
GAAGTGGAATKrAATTCCACTTC |
|
|
all_m72_AAV28_RS02270_m2 |
AAV28_RS02270_m2 |
cluster_258 |
all |
21 |
27.73 |
350 |
+CCCCCTCTCCCTCCCCCCGC |
GCGGGGGGAGGGAGAGGGGG+ |
|
|
all_m831_AAV28_RS20065_m1 |
AAV28_RS20065_m1 |
cluster_219 |
all |
11 |
14.56 |
121 |
GAAGmCGAGGA |
TCCTCGKCTTC |
|
|
all_m1479_AAV28_RS37720_m4 |
AAV28_RS37720_m4 |
cluster_12 |
all |
14 |
8.34 |
149 |
++++ATA--yTAG+ |
+CTAR--TAT++++ |
|
|
all_m455_AAV28_RS12325_m5 |
AAV28_RS12325_m5 |
cluster_290 |
all |
26 |
11.09 |
113 |
TTCC-----------------TCCA+ |
+TGGA-----------------GGAA |
|
|
all_m475_AAV28_RS12970_m5 |
AAV28_RS12970_m5 |
cluster_211 |
all |
9 |
11.09 |
350 |
CGCGCAAC+ |
+GTTGCGCG |
|
|
all_m914_AAV28_RS21965_m4 |
AAV28_RS21965_m4 |
cluster_115 |
all |
10 |
11.09 |
350 |
+ACTTAAAG+ |
+CTTTAAGT+ |
|
|
all_m535_AAV28_RS14045_m5 |
AAV28_RS14045_m5 |
cluster_18 |
all |
14 |
14.59 |
366 |
ATCTY--GAGGAT+ |
+ATCCTC--rAGAT |
|
|
all_m968_AAV28_RS23100_m3 |
AAV28_RS23100_m3 |
cluster_347 |
all |
17 |
12.48 |
126 |
CCCGT--------TGAT |
ATCA--------ACGGG |
|
|
all_m140_AAV28_RS03080_m5 |
AAV28_RS03080_m5 |
cluster_230 |
all |
24 |
9.70 |
141 |
ATGA---------------CGC++ |
++GCG---------------TCAT |
|
|
all_m1070_AAV28_RS25485_m5 |
AAV28_RS25485_m5 |
cluster_200 |
all |
27 |
9.70 |
122 |
+TTC-----------------CACG++ |
++CGTG-----------------GAA+ |
|
|
all_m386_AAV28_RS11580_m1 |
AAV28_RS11580_m1 |
cluster_164 |
all |
15 |
15.34 |
536 |
CCCCGssCGGGG+++ |
+++CCCCGSSCGGGG |
|
|
all_m1400_AAV28_RS34875_m5 |
AAV28_RS34875_m5 |
cluster_1 |
all |
26 |
11.78 |
254 |
+++++AAAw-----ATATT+++++++ |
+++++++AATAT-----WTTT+++++ |
|
|
all_m1325_AAV28_RS32435_m5 |
AAV28_RS32435_m5 |
cluster_344 |
all |
10 |
9.70 |
163 |
GCAAATG+++ |
+++CATTTGC |
|
|
all_m336_AAV28_RS09930_m1 |
AAV28_RS09930_m1 |
cluster_120 |
all |
15 |
18.32 |
402 |
ATTTCCAHTTTTTG+ |
+CAAAAAdTGGAAAT |
|
|
all_m753_AAV28_RS17915_m3 |
AAV28_RS17915_m3 |
cluster_110 |
all |
17 |
11.09 |
294 |
+GCGC------CACC++ |
++GGTG------GCGC+ |
|
|
all_m518_AAV28_RS13850_m3 |
AAV28_RS13850_m3 |
cluster_189 |
all |
12 |
12.48 |
109 |
+++AGGGAGAGG |
CCTCTCCCT+++ |
|
|
all_m1283_AAV28_RS31565_m3 |
AAV28_RS31565_m3 |
cluster_63 |
all |
15 |
17.34 |
115 |
CGAGGs--AGGAACA |
TGTTCCT--SCCTCG |
|
|
all_m46_AAV28_RS02075_m1 |
AAV28_RS02075_m1 |
cluster_306 |
all |
18 |
13.90 |
210 |
AATCs-------sGGCGC |
GCGCCS-------SGATT |
|
|
all_m1334_AAV28_RS32670_m4 |
AAV28_RS32670_m4 |
cluster_59 |
all |
16 |
12.48 |
309 |
+++TCGTTAACC++++ |
++++GGTTAACGA+++ |
|
|
all_m277_AAV28_RS08065_m2 |
AAV28_RS08065_m2 |
cluster_290 |
all |
26 |
13.17 |
81 |
+++CCCTk-------------TCCAT |
ATGGA-------------MAGGG+++ |
|
|
all_m129_AAV28_RS02970_m4 |
AAV28_RS02970_m4 |
cluster_224 |
all |
13 |
16.64 |
253 |
+CTGTCATGACAG |
CTGTCATGACAG+ |
|
|
all_m1147_AAV28_RS28390_m2 |
AAV28_RS28390_m2 |
cluster_356 |
all |
20 |
11.09 |
146 |
AAAGA------------GAT |
ATC------------TCTTT |
|
|
all_m1455_AAV28_RS36300_m5 |
AAV28_RS36300_m5 |
cluster_52 |
all |
16 |
18.04 |
970 |
CCTGCTGsCACCAT++ |
++ATGGTGSCAGCAGG |
|
|
all_m878_AAV28_RS21195_m3 |
AAV28_RS21195_m3 |
cluster_6 |
all |
9 |
12.48 |
121 |
TCAAACTGC |
GCAGTTTGA |
|
|
all_m1092_AAV28_RS26085_m2 |
AAV28_RS26085_m2 |
cluster_1 |
all |
26 |
12.48 |
90 |
++++AGTA------ATTTG+++++++ |
+++++++CAAAT------TACT++++ |
|
|
all_m1148_AAV28_RS28390_m3 |
AAV28_RS28390_m3 |
cluster_33 |
all |
24 |
20.14 |
524 |
ATATATAAAw------wTATAT++ |
++ATATAW------WTTTATATAT |
|
|
all_m952_AAV28_RS22935_m2 |
AAV28_RS22935_m2 |
cluster_135 |
all |
16 |
14.57 |
156 |
+++GGTGCSCCCGG++ |
++CCGGGsGCACC+++ |
|
|
all_m47_AAV28_RS02075_m2 |
AAV28_RS02075_m2 |
cluster_190 |
all |
27 |
12.10 |
197 |
CGGCS-----------------MGATG |
CATCk-----------------sGCCG |
|
|
all_m356_AAV28_RS10315_m1 |
AAV28_RS10315_m1 |
cluster_96 |
all |
10 |
13.86 |
180 |
GTCAAGGCCC |
GGGCCTTGAC |
|
|
all_m1057_AAV28_RS25155_m2 |
AAV28_RS25155_m2 |
cluster_163 |
all |
20 |
11.80 |
241 |
+AATA----------wATGG |
CCATW----------TATT+ |
|
|
all_m871_AAV28_RS21115_m1 |
AAV28_RS21115_m1 |
cluster_294 |
all |
9 |
11.09 |
202 |
GCCAGGAC+ |
+GTCCTGGC |
|
|
all_m3_AAV28_RS00905_m3 |
AAV28_RS00905_m3 |
cluster_103 |
all |
18 |
16.68 |
627 |
+GCGATCr--ATCGCG++ |
++CGCGAT--YGATCGC+ |
|
|
all_m152_AAV28_RS03590_m2 |
AAV28_RS03590_m2 |
cluster_47 |
all |
27 |
12.48 |
148 |
+TCGCA-----------------CAAA |
TTTG-----------------TGCGA+ |
|
|
all_m201_AAV28_RS06855_m1 |
AAV28_RS06855_m1 |
cluster_1 |
all |
26 |
21.79 |
953 |
++++ATAATATAdwTTATATT+++++ |
+++++AATATAAWHTATATTAT++++ |
|
|
all_m1114_AAV28_RS27295_m4 |
AAV28_RS27295_m4 |
cluster_179 |
all |
9 |
10.41 |
613 |
+GGCkCCAA |
TTGGMGCC+ |
|
|
all_m66_AAV28_RS02220_m1 |
AAV28_RS02220_m1 |
cluster_277 |
all |
16 |
14.45 |
468 |
ATGAAB----VTTCAT |
ATGAAb----vTTCAT |
|
|
all_m649_AAV28_RS16270_m4 |
AAV28_RS16270_m4 |
cluster_125 |
all |
14 |
16.64 |
135 |
+ATTTTCAAAAAT+ |
+ATTTTTGAAAAT+ |
|
|
all_m718_AAV28_RS17410_m3 |
AAV28_RS17410_m3 |
cluster_68 |
all |
27 |
10.41 |
232 |
++GACG----------------sGAA+ |
+TTCS----------------CGTC++ |
|
|
all_m1193_AAV28_RS29365_m3 |
AAV28_RS29365_m3 |
cluster_297 |
all |
14 |
12.48 |
166 |
+GGAG----CGGAG |
CTCCG----CTCC+ |
|
|
all_m1328_AAV28_RS32510_m3 |
AAV28_RS32510_m3 |
cluster_120 |
all |
15 |
15.25 |
128 |
+++AAAATGCAATT+ |
+AATTGCATTTT+++ |
|
|
all_m1267_AAV28_RS31410_m2 |
AAV28_RS31410_m2 |
cluster_48 |
all |
19 |
18.02 |
97 |
+TGTGACG--AACTCA+++ |
+++TGAGTT--CGTCACA+ |
|
|
all_m1407_AAV28_RS35690_m2 |
AAV28_RS35690_m2 |
cluster_9 |
all |
32 |
37.43 |
350 |
+++AAAAAAATAAATATAAATTATATTTTA++ |
++TAAAATATAATTTATATTTATTTTTTT+++ |
|
|
all_m1188_AAV28_RS29085_m3 |
AAV28_RS29085_m3 |
cluster_39 |
all |
10 |
10.08 |
643 |
AATCrATA++ |
++TATYGATT |
|
|
all_m810_AAV28_RS19140_m5 |
AAV28_RS19140_m5 |
cluster_7 |
all |
15 |
12.48 |
208 |
+++TCGATACCG+++ |
+++CGGTATCGA+++ |
|
|
all_m1447_AAV28_RS36225_m2 |
AAV28_RS36225_m2 |
cluster_89 |
all |
11 |
13.86 |
151 |
+CGATTGTTGC |
GCAACAATCG+ |
|
|
all_m40_AAV28_RS01975_m5 |
AAV28_RS01975_m5 |
cluster_60 |
all |
16 |
18.02 |
350 |
+GATTGTTTCGTGG++ |
++CCACGAAACAATC+ |
|
|
all_m210_AAV28_RS06935_m5 |
AAV28_RS06935_m5 |
cluster_264 |
all |
21 |
14.69 |
149 |
GCCAGA----------GGGAT |
ATCCC----------TCTGGC |
|
|
all_m1094_AAV28_RS26085_m4 |
AAV28_RS26085_m4 |
cluster_152 |
all |
19 |
11.79 |
127 |
++++CATCY--CTTG++++ |
++++CAAG--rGATG++++ |
|
|
all_m727_AAV28_RS17635_m2 |
AAV28_RS17635_m2 |
cluster_130 |
all |
18 |
18.02 |
96 |
TATGATAATCATA+++++ |
+++++TATGATTATCATA |
|
|
all_m312_AAV28_RS09095_m2 |
AAV28_RS09095_m2 |
cluster_256 |
all |
12 |
12.58 |
624 |
++AAGTTrCTAT |
ATAGYAACTT++ |
|
|
all_m561_AAV28_RS14395_m1 |
AAV28_RS14395_m1 |
cluster_143 |
all |
20 |
13.52 |
134 |
+CACGs--------sGCGGG |
CCCGCS--------SCGTG+ |
|
|
all_m1483_AAV28_RS37890_m3 |
AAV28_RS37890_m3 |
cluster_108 |
all |
14 |
13.92 |
129 |
+TTTCGGM--KCAT |
ATGm--kCCGAAA+ |
|
|
all_m1537_AAV28_RS40485_m2 |
AAV28_RS40485_m2 |
cluster_103 |
all |
18 |
19.05 |
350 |
TGCGCGM---SGCGCGCC |
GGCGCGCs---kCGCGCA |
|
|
all_m212_AAV28_RS06940_m2 |
AAV28_RS06940_m2 |
cluster_41 |
all |
15 |
15.25 |
72 |
++CAGCT--GGTGAC |
GTCACC--AGCTG++ |
|
|
all_m196_AAV28_RS06565_m1 |
AAV28_RS06565_m1 |
cluster_166 |
all |
12 |
12.48 |
183 |
++CTTCAAGAG+ |
+CTCTTGAAG++ |
|
|
all_m174_AAV28_RS05390_m4 |
AAV28_RS05390_m4 |
cluster_101 |
all |
26 |
11.09 |
350 |
+CGGCC---------------GGC++ |
++GCC---------------GGCCG+ |
|
|
all_m1079_AAV28_RS25790_m4 |
AAV28_RS25790_m4 |
cluster_363 |
all |
27 |
37.43 |
350 |
TTTATATTTGTATATTACATATACAAT |
ATTGTATATGTAATATACAAATATAAA |
|
|
all_m1059_AAV28_RS25155_m4 |
AAV28_RS25155_m4 |
cluster_61 |
all |
11 |
12.48 |
107 |
AATTAGTCA++ |
++TGACTAATT |
|
|
all_m1154_AAV28_RS28625_m4 |
AAV28_RS28625_m4 |
cluster_24 |
all |
33 |
40.20 |
291 |
++++ATTAAATGATATATATAATATATCATTTA |
TAAATGATATATTATATATATCATTTAAT++++ |
|
|
all_m1116_AAV28_RS27630_m1 |
AAV28_RS27630_m1 |
cluster_91 |
all |
12 |
13.86 |
128 |
+AATGACATCA+ |
+TGATGTCATT+ |
|
|
all_m1160_AAV28_RS28665_m5 |
AAV28_RS28665_m5 |
cluster_251 |
all |
18 |
19.42 |
290 |
AGCATCATW--WTATGC+ |
+GCATAw--wATGATGCT |
|
|
all_m946_AAV28_RS22715_m1 |
AAV28_RS22715_m1 |
cluster_59 |
all |
16 |
12.48 |
255 |
+++CCGTTAACC++++ |
++++GGTTAACGG+++ |
|
|
all_m1549_AAV28_RS41560_m4 |
AAV28_RS41560_m4 |
cluster_163 |
all |
20 |
12.48 |
100 |
++ACATA---------TTAT |
ATAA---------TATGT++ |
|
|
all_m1357_AAV28_RS33735_m2 |
AAV28_RS33735_m2 |
cluster_57 |
all |
26 |
15.95 |
428 |
+CCCCCCy-------------CCCCG |
CGGGG-------------RGGGGGG+ |
|
|
all_m1182_AAV28_RS29020_m2 |
AAV28_RS29020_m2 |
cluster_17 |
all |
28 |
14.20 |
208 |
+AACAAw---------------AAAAA+ |
+TTTTT---------------WTTGTT+ |
|
|
all_m1179_AAV28_RS29015_m4 |
AAV28_RS29015_m4 |
cluster_247 |
all |
21 |
9.70 |
45 |
+++CAA----------ACCT+ |
+AGGT----------TTG+++ |
|
|
all_m231_AAV28_RS07385_m1 |
AAV28_RS07385_m1 |
cluster_59 |
all |
16 |
19.77 |
1023 |
ATTTCGTTAAyaAAAT |
ATTTTRTTAACGAAAT |
|
|
all_m730_AAV28_RS17635_m5 |
AAV28_RS17635_m5 |
cluster_138 |
all |
14 |
19.41 |
137 |
GTCAGTATACTGAC |
GTCAGTATACTGAC |
|
|
all_m327_AAV28_RS09520_m2 |
AAV28_RS09520_m2 |
cluster_199 |
all |
18 |
11.42 |
453 |
GTTH--------AACTG+ |
+CAGTT--------dAAC |
|
|
all_m1282_AAV28_RS31565_m2 |
AAV28_RS31565_m2 |
cluster_63 |
all |
15 |
14.57 |
179 |
CGAGG----rGAACA |
TGTTCY----CCTCG |
|
|
all_m1347_AAV28_RS33335_m2 |
AAV28_RS33335_m2 |
cluster_33 |
all |
24 |
14.65 |
693 |
+++++TATATK-----WTATAT++ |
++ATATAw-----mATATA+++++ |
|
|
all_m1278_AAV28_RS31495_m3 |
AAV28_RS31495_m3 |
cluster_376 |
all |
8 |
10.02 |
684 |
CAThATGA |
TCATDATG |
|
|
all_m770_AAV28_RS18050_m5 |
AAV28_RS18050_m5 |
cluster_11 |
all |
16 |
17.63 |
363 |
++CGAAAAhwATTTCG |
CGAAATWDTTTTCG++ |
|
|
all_m337_AAV28_RS09930_m2 |
AAV28_RS09930_m2 |
cluster_30 |
all |
17 |
13.55 |
340 |
++AAAAATd--rAAA++ |
++TTTY--HATTTTT++ |
|
|
all_m218_AAV28_RS07210_m3 |
AAV28_RS07210_m3 |
cluster_4 |
all |
10 |
11.09 |
148 |
++CGACAAGC |
GCTTGTCG++ |
|
|
all_m1307_AAV28_RS32085_m2 |
AAV28_RS32085_m2 |
cluster_169 |
all |
11 |
15.25 |
164 |
GGGGGGTATAT |
ATATACCCCCC |
|
|
all_m1046_AAV28_RS25120_m1 |
AAV28_RS25120_m1 |
cluster_24 |
all |
33 |
24.95 |
299 |
+++CATATAATATATTATATG++++++++++++ |
++++++++++++CATATAATATATTATATG+++ |
|
|
all_m517_AAV28_RS13850_m2 |
AAV28_RS13850_m2 |
cluster_189 |
all |
12 |
13.86 |
127 |
++TAGGGACAGG |
CCTGTCCCTA++ |
|
|
all_m135_AAV28_RS03045_m5 |
AAV28_RS03045_m5 |
cluster_173 |
all |
14 |
13.86 |
350 |
+CGAT--CCGCGC+ |
+GCGCGG--ATCG+ |
|
|
all_m286_AAV28_RS08150_m1 |
AAV28_RS08150_m1 |
cluster_274 |
all |
17 |
13.92 |
784 |
+CCCGCbCCGCT+++++ |
+++++AGCGGVGCGGG+ |
|
|
all_m1448_AAV28_RS36225_m3 |
AAV28_RS36225_m3 |
cluster_84 |
all |
19 |
13.86 |
142 |
GTTGA---GATGG++++++ |
++++++CCATC---TCAAC |
|
|
all_m766_AAV28_RS18050_m1 |
AAV28_RS18050_m1 |
cluster_11 |
all |
16 |
13.88 |
795 |
++CGAAAW--DTTTCG |
CGAAAh--wTTTCG++ |
|
|
all_m1301_AAV28_RS32075_m1 |
AAV28_RS32075_m1 |
cluster_64 |
all |
11 |
13.32 |
87 |
AGGGTTAGAC+ |
+GTCTAACCCT |
|
|
all_m1004_AAV28_RS23660_m4 |
AAV28_RS23660_m4 |
cluster_1 |
all |
26 |
23.57 |
76 |
++++++TATATATTATATATTAG+++ |
+++CTAATATATAATATATA++++++ |
|
|
all_m262_AAV28_RS07770_m2 |
AAV28_RS07770_m2 |
cluster_282 |
all |
12 |
13.53 |
106 |
TTTCAv-mAGAT |
ATCTK-BTGAAA |
|
|
all_m934_AAV28_RS22385_m4 |
AAV28_RS22385_m4 |
cluster_116 |
all |
27 |
10.03 |
363 |
+GATS------------------CGCG |
CGCG------------------sATC+ |
|
|
all_m1361_AAV28_RS33760_m1 |
AAV28_RS33760_m1 |
cluster_39 |
all |
10 |
13.86 |
150 |
GATCGGTTCC |
GGAACCGATC |
|
|
all_m760_AAV28_RS17935_m5 |
AAV28_RS17935_m5 |
cluster_244 |
all |
10 |
8.32 |
113 |
ATG-CGT+++ |
+++ACG-CAT |
|
|
all_m989_AAV28_RS23295_m4 |
AAV28_RS23295_m4 |
cluster_68 |
all |
27 |
11.09 |
40 |
TCGA------------------CGTC+ |
+GACG------------------TCGA |
|
|
all_m955_AAV28_RS22935_m5 |
AAV28_RS22935_m5 |
cluster_309 |
all |
11 |
13.86 |
146 |
+CCGGTTTCAC |
GTGAAACCGG+ |
|
|
all_m1482_AAV28_RS37890_m2 |
AAV28_RS37890_m2 |
cluster_20 |
all |
9 |
12.48 |
106 |
TTTCGGACA |
TGTCCGAAA |
|
|
all_m942_AAV28_RS22700_m2 |
AAV28_RS22700_m2 |
cluster_21 |
all |
13 |
18.02 |
205 |
TGGGAACTTTTTT |
AAAAAAGTTCCCA |
|
|
all_m578_AAV28_RS14840_m3 |
AAV28_RS14840_m3 |
cluster_338 |
all |
17 |
12.48 |
247 |
GGGGC--------GGGA |
TCCC--------GCCCC |
|
|
all_m623_AAV28_RS15880_m3 |
AAV28_RS15880_m3 |
cluster_12 |
all |
14 |
15.95 |
296 |
+GTGAAATwTCAG+ |
+CTGAWATTTCAC+ |
|
|
all_m175_AAV28_RS05390_m5 |
AAV28_RS05390_m5 |
cluster_101 |
all |
26 |
9.70 |
198 |
+++GCC----------------GCTT |
AAGC----------------GGC+++ |
|
|
all_m245_AAV28_RS07410_m5 |
AAV28_RS07410_m5 |
cluster_68 |
all |
27 |
9.03 |
148 |
CCGr-------------------GAC+ |
+GTC-------------------YCGG |
|
|
all_m1327_AAV28_RS32510_m2 |
AAV28_RS32510_m2 |
cluster_67 |
all |
12 |
13.20 |
176 |
AAAAAw-CAAA+ |
+TTTG-WTTTTT |
|
|
all_m303_AAV28_RS08695_m3 |
AAV28_RS08695_m3 |
cluster_326 |
all |
22 |
24.95 |
350 |
++++AAAAATTTACAAATTTTT |
AAAAATTTGTAAATTTTT++++ |
|
|
all_m34_AAV28_RS01755_m4 |
AAV28_RS01755_m4 |
cluster_145 |
all |
11 |
9.70 |
230 |
++CGT-CCGG+ |
+CCGG-ACG++ |
|
|
all_m980_AAV28_RS23200_m5 |
AAV28_RS23200_m5 |
cluster_167 |
all |
24 |
13.17 |
135 |
+++CGCGC-----------rCACA |
TGTGY-----------GCGCG+++ |
|
|
all_m732_AAV28_RS17680_m2 |
AAV28_RS17680_m2 |
cluster_140 |
all |
16 |
13.17 |
182 |
+++GGCAT-YGCGG++ |
++CCGCr-ATGCC+++ |
|
|
all_m1279_AAV28_RS31495_m4 |
AAV28_RS31495_m4 |
cluster_28 |
all |
17 |
12.48 |
263 |
ATGAT------CATA++ |
++TATG------ATCAT |
|
|
all_m601_AAV28_RS15740_m1 |
AAV28_RS15740_m1 |
cluster_249 |
all |
26 |
24.95 |
236 |
AAATAAATATATTTATTT++++++++ |
++++++++AAATAAATATATTTATTT |
|
|
all_m1292_AAV28_RS31840_m2 |
AAV28_RS31840_m2 |
cluster_1 |
all |
26 |
17.64 |
366 |
++++++AATATTW-DTATATT+++++ |
+++++AATATAh-wAATATT++++++ |
|
|
all_m321_AAV28_RS09370_m1 |
AAV28_RS09370_m1 |
cluster_9 |
all |
32 |
38.82 |
290 |
++++TAAAAAAAATAAAATTTTATTTTTTTTA |
TAAAAAAAATAAAATTTTATTTTTTTTA++++ |
|
|
all_m832_AAV28_RS20065_m2 |
AAV28_RS20065_m2 |
cluster_333 |
all |
12 |
15.58 |
178 |
AGGAsGGACGGG |
CCCGTCCSTCCT |
|
|
all_m29_AAV28_RS01725_m4 |
AAV28_RS01725_m4 |
cluster_101 |
all |
26 |
21.50 |
596 |
+CCGCCGC-------sGCCGCGGC++ |
++GCCGCGGCS-------GCGGCGG+ |
|
|
all_m457_AAV28_RS12655_m2 |
AAV28_RS12655_m2 |
cluster_84 |
all |
19 |
11.09 |
98 |
CCAT--------CGCA+++ |
+++TGCG--------ATGG |
|
|
all_m668_AAV28_RS16510_m3 |
AAV28_RS16510_m3 |
cluster_34 |
all |
23 |
22.52 |
571 |
+TCGATCGMTCGATCGGT+++++ |
+++++ACCGATCGAkCGATCGA+ |
|
|
all_m802_AAV28_RS18940_m2 |
AAV28_RS18940_m2 |
cluster_281 |
all |
20 |
12.48 |
350 |
CGCGC-----------CCCC |
GGGG-----------GCGCG |
|
|
all_m171_AAV28_RS05390_m1 |
AAV28_RS05390_m1 |
cluster_101 |
all |
26 |
13.89 |
560 |
+CAGCCb-------------vGGCTG |
CAGCCB-------------VGGCTG+ |
|
|
all_m1185_AAV28_RS29020_m5 |
AAV28_RS29020_m5 |
cluster_17 |
all |
28 |
22.18 |
116 |
AAACAATTG-----------AAAAAAA+ |
+TTTTTTT-----------CAATTGTTT |
|
|
all_m715_AAV28_RS17195_m5 |
AAV28_RS17195_m5 |
cluster_150 |
all |
21 |
11.09 |
119 |
+++CCAA--------TTTT++ |
++AAAA--------TTGG+++ |
|
|
all_m1014_AAV28_RS24325_m4 |
AAV28_RS24325_m4 |
cluster_1 |
all |
26 |
20.14 |
545 |
++++++CATAw-TAATATATTA++++ |
++++TAATATATTA-WTATG++++++ |
|
|
all_m1464_AAV28_RS36460_m4 |
AAV28_RS36460_m4 |
cluster_327 |
all |
20 |
24.99 |
350 |
ATATTTCCGAAATw-sGAAC |
GTTCS-WATTTCGGAAATAT |
|
|
all_m1558_AAV28_RS43455_m3 |
AAV28_RS43455_m3 |
cluster_71 |
all |
19 |
15.97 |
228 |
++++CCGGTC--RGCCGG+ |
+CCGGCy--GACCGG++++ |
|
|
all_m977_AAV28_RS23200_m2 |
AAV28_RS23200_m2 |
cluster_8 |
all |
21 |
20.79 |
198 |
+++AGGGGGGAGGGAGGA+++ |
+++TCCTCCCTCCCCCCT+++ |
|
|
all_m1293_AAV28_RS31840_m3 |
AAV28_RS31840_m3 |
cluster_1 |
all |
26 |
26.34 |
172 |
+++++TTATATAAATTATAATTTA++ |
++TAAATTATAATTTATATAA+++++ |
|
|
all_m1071_AAV28_RS25580_m1 |
AAV28_RS25580_m1 |
cluster_2 |
all |
19 |
19.41 |
350 |
+++GGAAT--CGAGATTCC |
GGAATCTCG--ATTCC+++ |
|
|
all_m1350_AAV28_RS33335_m5 |
AAV28_RS33335_m5 |
cluster_33 |
all |
24 |
17.67 |
579 |
++++ATAAATw----wATATAT++ |
++ATATATW----WATTTAT++++ |
|
|
all_m428_AAV28_RS11970_m3 |
AAV28_RS11970_m3 |
cluster_125 |
all |
14 |
13.20 |
480 |
TATTy---GAAAA+ |
+TTTTC---RAATA |
|
|
all_m1025_AAV28_RS24520_m5 |
AAV28_RS24520_m5 |
cluster_150 |
all |
21 |
9.70 |
62 |
+TGCA---------TTT++++ |
++++AAA---------TGCA+ |
|
|
all_m1387_AAV28_RS34355_m2 |
AAV28_RS34355_m2 |
cluster_41 |
all |
15 |
15.37 |
320 |
GTCAGY---KTTGAC |
GTCAAM---rCTGAC |
|
|
all_m1477_AAV28_RS37720_m2 |
AAV28_RS37720_m2 |
cluster_1 |
all |
26 |
20.81 |
150 |
++++ACTATATArATTATAA++++++ |
++++++TTATAATYTATATAGT++++ |
|
|
all_m1333_AAV28_RS32670_m3 |
AAV28_RS32670_m3 |
cluster_10 |
all |
21 |
13.91 |
469 |
++GTTAA------STTAAC++ |
++GTTAAs------TTAAC++ |
|
|
all_m1443_AAV28_RS36200_m3 |
AAV28_RS36200_m3 |
cluster_1 |
all |
26 |
18.03 |
644 |
++++++TATATAw-wTATAAT+++++ |
+++++ATTATAW-WTATATA++++++ |
|
|
all_m161_AAV28_RS04825_m1 |
AAV28_RS04825_m1 |
cluster_365 |
all |
17 |
16.38 |
461 |
AATCCCv----GGGATT |
AATCCC----BGGGATT |
|
|
all_m1263_AAV28_RS31195_m3 |
AAV28_RS31195_m3 |
cluster_174 |
all |
17 |
11.80 |
586 |
CGTCm------GGAA++ |
++TTCC------KGACG |
|
|
all_m12_AAV28_RS01290_m2 |
AAV28_RS01290_m2 |
cluster_129 |
all |
27 |
12.61 |
337 |
GACCC----------------KTTTG+ |
+CAAAm----------------GGGTC |
|
|
all_m1087_AAV28_RS25875_m2 |
AAV28_RS25875_m2 |
cluster_90 |
all |
10 |
13.86 |
184 |
AATCTTTACG |
CGTAAAGATT |
|
|
all_m644_AAV28_RS16200_m4 |
AAV28_RS16200_m4 |
cluster_61 |
all |
11 |
9.01 |
414 |
++GAAwTTA++ |
++TAAWTTC++ |
|
|
all_m155_AAV28_RS03590_m5 |
AAV28_RS03590_m5 |
cluster_47 |
all |
27 |
14.63 |
297 |
+TCGCAAW---------------CAAA |
TTTG---------------WTTGCGA+ |
|
|
all_m1205_AAV28_RS29670_m5 |
AAV28_RS29670_m5 |
cluster_139 |
all |
27 |
9.70 |
44 |
ATTT-------------------TGA+ |
+TCA-------------------AAAT |
|
|
all_m1068_AAV28_RS25485_m3 |
AAV28_RS25485_m3 |
cluster_146 |
all |
16 |
11.80 |
97 |
GATW----GCCTG+++ |
+++CAGGC----wATC |
|
|
all_m669_AAV28_RS16510_m4 |
AAV28_RS16510_m4 |
cluster_34 |
all |
23 |
18.54 |
534 |
++TCGATCgTGCGATC+++++++ |
+++++++GATCGCACGATCGA++ |
|
|
all_m833_AAV28_RS20065_m3 |
AAV28_RS20065_m3 |
cluster_334 |
all |
12 |
9.02 |
112 |
AGG-----sGGA |
TCCS-----CCT |
|
|
all_m797_AAV28_RS18740_m2 |
AAV28_RS18740_m2 |
cluster_46 |
all |
13 |
14.58 |
270 |
GTTTGSGGGGG++ |
++CCCCCsCAAAC |
|
|
all_m1175_AAV28_RS28985_m5 |
AAV28_RS28985_m5 |
cluster_214 |
all |
30 |
32.58 |
363 |
TTCCTCCCCY------GGGGAGGGAGGGAG |
CTCCCTCCCTCCCC------rGGGGAGGAA |
|
|
all_m744_AAV28_RS17805_m4 |
AAV28_RS17805_m4 |
cluster_226 |
all |
27 |
11.09 |
15 |
++GTCGG---------------TAT++ |
++ATA---------------CCGAC++ |
|
|
all_m870_AAV28_RS20945_m5 |
AAV28_RS20945_m5 |
cluster_80 |
all |
16 |
12.79 |
240 |
++TTTWTATAAT++++ |
++++ATTATAwAAA++ |
|
|
all_m685_AAV28_RS16575_m5 |
AAV28_RS16575_m5 |
cluster_12 |
all |
14 |
11.40 |
276 |
+++TATTDTATC++ |
++GATAhAATA+++ |
|
|
all_m348_AAV28_RS10255_m3 |
AAV28_RS10255_m3 |
cluster_314 |
all |
12 |
11.09 |
135 |
+GACCCAAA+++ |
+++TTTGGGTC+ |
|
|
all_m1223_AAV28_RS30335_m3 |
AAV28_RS30335_m3 |
cluster_59 |
all |
16 |
13.86 |
350 |
+TATGGTTAAT+++++ |
+++++ATTAACCATA+ |
|
|
all_m276_AAV28_RS08065_m1 |
AAV28_RS08065_m1 |
cluster_103 |
all |
18 |
14.96 |
148 |
++CGGACS--KCCGCG++ |
++CGCGGm--sGTCCG++ |
|
|
all_m837_AAV28_RS20445_m2 |
AAV28_RS20445_m2 |
cluster_124 |
all |
12 |
15.97 |
282 |
CGGGCArGGACT |
AGTCCYTGCCCG |
|
|
all_m1211_AAV28_RS29810_m1 |
AAV28_RS29810_m1 |
cluster_222 |
all |
17 |
8.32 |
350 |
++AAT-------TAA++ |
++TTA-------ATT++ |
|
|
all_m536_AAV28_RS14135_m1 |
AAV28_RS14135_m1 |
cluster_103 |
all |
18 |
16.65 |
1198 |
CGCGGCC---SCCGCG++ |
++CGCGGs---GGCCGCG |
|
|
all_m113_AAV28_RS02770_m3 |
AAV28_RS02770_m3 |
cluster_180 |
all |
24 |
12.96 |
309 |
+TTCCG-----------yGGCA++ |
++TGCCR-----------CGGAA+ |
|
|
all_m1512_AAV28_RS39675_m2 |
AAV28_RS39675_m2 |
cluster_191 |
all |
20 |
12.13 |
169 |
++CCATK--------RCATG |
CATGy--------mATGG++ |
|
|
all_m726_AAV28_RS17635_m1 |
AAV28_RS17635_m1 |
cluster_138 |
all |
14 |
17.35 |
190 |
GTCAGCATAmTGA+ |
+TCAKTATGCTGAC |
|
|
all_m1418_AAV28_RS35785_m3 |
AAV28_RS35785_m3 |
cluster_262 |
all |
11 |
12.48 |
211 |
TACGCTACG++ |
++CGTAGCGTA |
|
|
all_m554_AAV28_RS14265_m4 |
AAV28_RS14265_m4 |
cluster_1 |
all |
26 |
9.02 |
518 |
+++++AAAw-----ATA+++++++++ |
+++++++++TAT-----WTTT+++++ |
|
|
all_m763_AAV28_RS18030_m3 |
AAV28_RS18030_m3 |
cluster_74 |
all |
15 |
13.18 |
188 |
+TATAAy---ATAA+ |
+TTAT---RTTATA+ |
|
|
all_m24_AAV28_RS01495_m4 |
AAV28_RS01495_m4 |
cluster_313 |
all |
17 |
11.09 |
145 |
ATAA--------ATGA+ |
+TCAT--------TTAT |
|
|
all_m1424_AAV28_RS36020_m4 |
AAV28_RS36020_m4 |
cluster_37 |
all |
27 |
13.97 |
480 |
AAAAY----------------rGTTCC |
GGAACY----------------RTTTT |
|
|
all_m251_AAV28_RS07505_m1 |
AAV28_RS07505_m1 |
cluster_206 |
all |
16 |
20.85 |
900 |
TCCCCCCAAGkGGGGA |
TCCCCMCTTGGGGGGA |
|
|
all_m1337_AAV28_RS33255_m2 |
AAV28_RS33255_m2 |
cluster_45 |
all |
19 |
12.81 |
322 |
TTATAd--------kATAA |
TTATM--------HTATAA |
|
|
all_m815_AAV28_RS19440_m5 |
AAV28_RS19440_m5 |
cluster_362 |
all |
10 |
13.86 |
37 |
ACCATACCCG |
CGGGTATGGT |
|
|
all_m116_AAV28_RS02835_m1 |
AAV28_RS02835_m1 |
cluster_8 |
all |
21 |
11.84 |
529 |
++++++CCCCT-yCCC+++++ |
+++++GGGR-AGGGG++++++ |
|
|
all_m1084_AAV28_RS25830_m4 |
AAV28_RS25830_m4 |
cluster_36 |
all |
11 |
11.09 |
172 |
++GATTACCT+ |
+AGGTAATC++ |
|
|
all_m927_AAV28_RS22335_m2 |
AAV28_RS22335_m2 |
cluster_7 |
all |
15 |
12.48 |
124 |
++++CGATCACGC++ |
++GCGTGATCG++++ |
|
|
all_m243_AAV28_RS07410_m3 |
AAV28_RS07410_m3 |
cluster_126 |
all |
17 |
21.62 |
297 |
TCGTCGGGG-SCGACGG |
CCGTCGS-CCCCGACGA |
|
|
all_m94_AAV28_RS02555_m4 |
AAV28_RS02555_m4 |
cluster_146 |
all |
16 |
18.32 |
457 |
CAGGh--AAAATCCTC |
GAGGATTTT--DCCTG |
|
|
all_m349_AAV28_RS10255_m4 |
AAV28_RS10255_m4 |
cluster_341 |
all |
21 |
12.48 |
128 |
AGTAy-----------yCGAG |
CTCGR-----------RTACT |
|
|
all_m1257_AAV28_RS31130_m2 |
AAV28_RS31130_m2 |
cluster_215 |
all |
17 |
16.67 |
590 |
TAAAGCC--YTTTTT++ |
++AAAAAr--GGCTTTA |
|
|
all_m1155_AAV28_RS28625_m5 |
AAV28_RS28625_m5 |
cluster_248 |
all |
29 |
13.86 |
201 |
++TATGA----------------GATGA+ |
+TCATC----------------TCATA++ |
|
|
all_m1534_AAV28_RS40420_m4 |
AAV28_RS40420_m4 |
cluster_127 |
all |
11 |
11.09 |
121 |
ACTACGGG+++ |
+++CCCGTAGT |
|
|
all_m297_AAV28_RS08640_m2 |
AAV28_RS08640_m2 |
cluster_149 |
all |
27 |
13.89 |
66 |
+CAGAk---------------sCGAAC |
GTTCGS---------------MTCTG+ |
|
|
all_m664_AAV28_RS16470_m4 |
AAV28_RS16470_m4 |
cluster_103 |
all |
18 |
13.86 |
142 |
+GTGCGC------GCAC+ |
+GTGC------GCGCAC+ |
|
|
all_m537_AAV28_RS14135_m2 |
AAV28_RS14135_m2 |
cluster_71 |
all |
19 |
12.82 |
350 |
+++GCGGS-----CCGGC+ |
+GCCGG-----sCCGC+++ |
|
|
all_m687_AAV28_RS16595_m2 |
AAV28_RS16595_m2 |
cluster_280 |
all |
26 |
12.13 |
128 |
+GGCCs---------------mAAAA |
TTTTK---------------SGGCC+ |
|
|
all_m734_AAV28_RS17680_m4 |
AAV28_RS17680_m4 |
cluster_121 |
all |
19 |
20.79 |
88 |
GCTCGTCCA----TCGAGC |
GCTCGA----TGGACGAGC |
|
|
all_m1290_AAV28_RS31795_m5 |
AAV28_RS31795_m5 |
cluster_1 |
all |
26 |
23.57 |
127 |
+++++TAATATAAATTATATTA++++ |
++++TAATATAATTTATATTA+++++ |
|
|
all_m1231_AAV28_RS30560_m1 |
AAV28_RS30560_m1 |
cluster_93 |
all |
11 |
13.86 |
350 |
+GGAGAGCGCC |
GGCGCTCTCC+ |
|
|
all_m830_AAV28_RS19675_m5 |
AAV28_RS19675_m5 |
cluster_28 |
all |
17 |
15.29 |
163 |
++GCTAk---GCATAGC |
GCTATGC---MTAGC++ |
|
|
all_m737_AAV28_RS17775_m2 |
AAV28_RS17775_m2 |
cluster_312 |
all |
11 |
11.09 |
76 |
CCA---TACGA |
TCGTA---TGG |
|
|
all_m1159_AAV28_RS28665_m4 |
AAV28_RS28665_m4 |
cluster_251 |
all |
18 |
9.70 |
124 |
+++ATC-------ATGC+ |
+GCAT-------GAT+++ |
|
|
all_m1544_AAV28_RS41180_m4 |
AAV28_RS41180_m4 |
cluster_228 |
all |
18 |
15.94 |
183 |
GGTTy------GGAAACA |
TGTTTCC------RAACC |
|
|
all_m166_AAV28_RS05160_m1 |
AAV28_RS05160_m1 |
cluster_73 |
all |
16 |
16.00 |
173 |
GGCTAy---GAACAA+ |
+TTGTTC---RTAGCC |
|
|
all_m1532_AAV28_RS40420_m2 |
AAV28_RS40420_m2 |
cluster_15 |
all |
14 |
13.93 |
411 |
CCGTAk--mTACGG |
CCGTAK--MTACGG |
|
|
all_m107_AAV28_RS02685_m2 |
AAV28_RS02685_m2 |
cluster_185 |
all |
24 |
22.18 |
350 |
CAAATGCAGATGCAAT++++++++ |
++++++++ATTGCATCTGCATTTG |
|
|
all_m1568_AAV28_RS45505_m3 |
AAV28_RS45505_m3 |
cluster_8 |
all |
21 |
18.76 |
221 |
+++CCCCCCCs-CCCCGC+++ |
+++GCGGGG-SGGGGGGG+++ |
|
|
all_m1216_AAV28_RS30225_m1 |
AAV28_RS30225_m1 |
cluster_134 |
all |
22 |
14.56 |
212 |
TCCCGm----------AACAA+ |
+TTGTT----------KCGGGA |
|
|
all_m1553_AAV28_RS42435_m3 |
AAV28_RS42435_m3 |
cluster_225 |
all |
19 |
13.96 |
169 |
+TGTCR-------mCAAGG |
CCTTGK-------YGACA+ |
|
|
all_m593_AAV28_RS15195_m3 |
AAV28_RS15195_m3 |
cluster_115 |
all |
10 |
12.48 |
224 |
GGCTTACGG+ |
+CCGTAAGCC |
|
|
all_m717_AAV28_RS17410_m2 |
AAV28_RS17410_m2 |
cluster_68 |
all |
27 |
13.18 |
232 |
++GACGA---------------sGACA |
TGTCS---------------TCGTC++ |
|
|
all_m54_AAV28_RS02140_m4 |
AAV28_RS02140_m4 |
cluster_56 |
all |
14 |
11.09 |
212 |
CGAGC----CCC++ |
++GGG----GCTCG |
|
|
all_m1227_AAV28_RS30470_m2 |
AAV28_RS30470_m2 |
cluster_259 |
all |
18 |
16.64 |
136 |
GTTTGA------TTGCGG |
CCGCAA------TCAAAC |
|
|
all_m495_AAV28_RS13450_m5 |
AAV28_RS13450_m5 |
cluster_204 |
all |
10 |
10.71 |
402 |
CGGGAGGA++ |
++TCCTCCCG |
|
|
all_m384_AAV28_RS11120_m4 |
AAV28_RS11120_m4 |
cluster_1 |
all |
26 |
19.71 |
862 |
+CGATAAATh---TTTATT+++++++ |
+++++++AATAAA---DATTTATCG+ |
|
|
all_m494_AAV28_RS13450_m4 |
AAV28_RS13450_m4 |
cluster_221 |
all |
22 |
11.79 |
152 |
++CTCY----------TCTCT+ |
+AGAGA----------rGAG++ |
|
|
all_m606_AAV28_RS15805_m1 |
AAV28_RS15805_m1 |
cluster_164 |
all |
15 |
13.20 |
350 |
CCGCS-CGGGC++++ |
++++GCCCG-sGCGG |
|
|
all_m101_AAV28_RS02645_m1 |
AAV28_RS02645_m1 |
cluster_137 |
all |
22 |
25.59 |
444 |
++TATGCGCAkhTGCGCAAATA |
TATTTGCGCADMTGCGCATA++ |
|
|
all_m121_AAV28_RS02840_m1 |
AAV28_RS02840_m1 |
cluster_208 |
all |
11 |
12.48 |
131 |
TCTCACAAG++ |
++CTTGTGAGA |
|
|
all_m865_AAV28_RS20795_m5 |
AAV28_RS20795_m5 |
cluster_103 |
all |
18 |
12.48 |
97 |
+++GCGCG---GCGC+++ |
+++GCGC---CGCGC+++ |
|
|
all_m313_AAV28_RS09095_m3 |
AAV28_RS09095_m3 |
cluster_256 |
all |
12 |
9.80 |
619 |
++CAGY-ACTA+ |
+TAGT-rCTG++ |
|
|
all_m851_AAV28_RS20670_m1 |
AAV28_RS20670_m1 |
cluster_205 |
all |
23 |
13.97 |
315 |
CGCGAt-----------cGTCCG |
CGGACG-----------ATCGCG |
|
|
all_m249_AAV28_RS07470_m4 |
AAV28_RS07470_m4 |
cluster_377 |
all |
21 |
20.79 |
215 |
AAGCGGA------CTCCGTTT |
AAACGGAG------TCCGCTT |
|
|
all_m420_AAV28_RS11950_m5 |
AAV28_RS11950_m5 |
cluster_255 |
all |
13 |
11.09 |
350 |
+GAA----GGAAA |
TTTCC----TTC+ |
|
|
all_m1229_AAV28_RS30470_m4 |
AAV28_RS30470_m4 |
cluster_98 |
all |
12 |
12.48 |
120 |
TTCG---GAGCG |
CGCTC---CGAA |
|
|
all_m1515_AAV28_RS39675_m5 |
AAV28_RS39675_m5 |
cluster_191 |
all |
20 |
10.09 |
157 |
+++TATR---------CATG |
CATG---------yATA+++ |
|
|
all_m1035_AAV28_RS24605_m5 |
AAV28_RS24605_m5 |
cluster_213 |
all |
8 |
9.70 |
43 |
TATTAGA+ |
+TCTAATA |
|
|
all_m1043_AAV28_RS25035_m3 |
AAV28_RS25035_m3 |
cluster_40 |
all |
20 |
14.58 |
483 |
++GCTGCR------CAGCC+ |
+GGCTG------yGCAGC++ |
|
|
all_m158_AAV28_RS03835_m3 |
AAV28_RS03835_m3 |
cluster_99 |
all |
14 |
18.08 |
460 |
GTTTGGGAmCAAAC |
GTTTGKTCCCAAAC |
|
|
all_m287_AAV28_RS08150_m2 |
AAV28_RS08150_m2 |
cluster_274 |
all |
17 |
18.02 |
350 |
CTGCGCTCCGCTC++++ |
++++GAGCGGAGCGCAG |
|
|
all_m950_AAV28_RS22715_m5 |
AAV28_RS22715_m5 |
cluster_37 |
all |
27 |
17.42 |
251 |
GGAACS--------------GCGTTCC |
GGAACGC--------------SGTTCC |
|
|
all_m849_AAV28_RS20650_m4 |
AAV28_RS20650_m4 |
cluster_352 |
all |
17 |
11.79 |
255 |
CACGs--------GCCA |
TGGC--------SCGTG |
|
|
all_m333_AAV28_RS09645_m3 |
AAV28_RS09645_m3 |
cluster_135 |
all |
16 |
18.02 |
62 |
+++CCCGGAACACCAG |
CTGGTGTTCCGGG+++ |
|
|
all_m1135_AAV28_RS28285_m5 |
AAV28_RS28285_m5 |
cluster_287 |
all |
10 |
9.70 |
78 |
GAGG---TGT |
ACA---CCTC |
|
|
all_m1078_AAV28_RS25790_m3 |
AAV28_RS25790_m3 |
cluster_249 |
all |
26 |
28.02 |
956 |
+GTAAATATATTTDTATATATG++++ |
++++CATATATAhAAATATATTTAC+ |
|
|
all_m58_AAV28_RS02195_m3 |
AAV28_RS02195_m3 |
cluster_33 |
all |
24 |
21.49 |
212 |
+++++TATATTk--ACAAATATA+ |
+TATATTTGT--MAATATA+++++ |
|
|
all_m814_AAV28_RS19440_m4 |
AAV28_RS19440_m4 |
cluster_5 |
all |
14 |
19.41 |
64 |
TAATCATACCCGAA |
TTCGGGTATGATTA |
|
|
all_m292_AAV28_RS08350_m2 |
AAV28_RS08350_m2 |
cluster_388 |
all |
12 |
16.64 |
109 |
TCCGGGGCTCGC |
GCGAGCCCCGGA |
|
|
all_m796_AAV28_RS18740_m1 |
AAV28_RS18740_m1 |
cluster_162 |
all |
21 |
18.04 |
1090 |
GGGGCGG-------cGCCGCC |
GGCGGCG-------CCGCCCC |
|
|
all_m59_AAV28_RS02195_m4 |
AAV28_RS02195_m4 |
cluster_33 |
all |
24 |
23.88 |
306 |
+++++TATATTTGHACAAATATA+ |
+TATATTTGTdCAAATATA+++++ |
|
|
all_m1143_AAV28_RS28385_m3 |
AAV28_RS28385_m3 |
cluster_159 |
all |
22 |
16.64 |
77 |
CGTCATT----------TTTAA |
TTAAA----------AATGACG |
|
|
all_m940_AAV28_RS22405_m5 |
AAV28_RS22405_m5 |
cluster_128 |
all |
20 |
22.18 |
350 |
+TTAACAAAAAAAAAAC+++ |
+++GTTTTTTTTTTGTTAA+ |
|
|
all_m1465_AAV28_RS36460_m5 |
AAV28_RS36460_m5 |
cluster_328 |
all |
20 |
27.05 |
363 |
CGAATTCCrGAATTCGGAAA |
TTTCCGAATTCYGGAATTCG |
|
|
all_m692_AAV28_RS16610_m2 |
AAV28_RS16610_m2 |
cluster_232 |
all |
12 |
10.32 |
357 |
CGAACAAT++++ |
++++ATTGTTCG |
|
|
all_m967_AAV28_RS23100_m2 |
AAV28_RS23100_m2 |
cluster_324 |
all |
16 |
13.86 |
135 |
TCTGA------CGAAA |
TTTCG------TCAGA |
|
|
all_m18_AAV28_RS01355_m3 |
AAV28_RS01355_m3 |
cluster_79 |
all |
28 |
18.85 |
462 |
CTTGGC--------------CCGCCAAG |
CTTGGCGG--------------GCCAAG |
|
|
all_m1459_AAV28_RS36350_m4 |
AAV28_RS36350_m4 |
cluster_136 |
all |
11 |
8.64 |
345 |
++CTGwCAA++ |
++TTGWCAG++ |
|
|
all_m591_AAV28_RS15195_m1 |
AAV28_RS15195_m1 |
cluster_87 |
all |
16 |
20.87 |
468 |
CGCTGyAAGGCACCTG |
CAGGTGCCTTRCAGCG |
|
|
all_m366_AAV28_RS10450_m1 |
AAV28_RS10450_m1 |
cluster_194 |
all |
19 |
13.86 |
127 |
+++AACA----AGAAGA++ |
++TCTTCT----TGTT+++ |
|
|
all_m443_AAV28_RS12170_m3 |
AAV28_RS12170_m3 |
cluster_284 |
all |
10 |
8.32 |
350 |
CGC---CGG+ |
+CCG---GCG |
|
|
all_m242_AAV28_RS07410_m2 |
AAV28_RS07410_m2 |
cluster_68 |
all |
27 |
9.03 |
148 |
GCGr-------------------GAC+ |
+GTC-------------------YCGC |
|
|
all_m102_AAV28_RS02645_m2 |
AAV28_RS02645_m2 |
cluster_137 |
all |
22 |
30.50 |
236 |
TATTTGCGCATATGCGCAAATA |
TATTTGCGCATATGCGCAAATA |
|
|
all_m259_AAV28_RS07765_m4 |
AAV28_RS07765_m4 |
cluster_135 |
all |
16 |
18.02 |
49 |
GTGTTGCGGTAGT+++ |
+++ACTACCGCAACAC |
|
|
all_m1007_AAV28_RS24040_m2 |
AAV28_RS24040_m2 |
cluster_89 |
all |
11 |
12.88 |
287 |
CGAATTATGG+ |
+CCATAaTTCG |
|
|
all_m1163_AAV28_RS28725_m3 |
AAV28_RS28725_m3 |
cluster_11 |
all |
16 |
11.71 |
816 |
+++GAAAV--BTTTC+ |
+GAAAv--bTTTC+++ |
|
|
all_m1131_AAV28_RS28285_m1 |
AAV28_RS28285_m1 |
cluster_26 |
all |
21 |
14.56 |
148 |
+GTGACG-------KCAGG++ |
++CCTGm-------CGTCAC+ |
|
|
all_m41_AAV28_RS02065_m1 |
AAV28_RS02065_m1 |
cluster_385 |
all |
23 |
26.34 |
202 |
AATTGTTGTT----ACAACAATT |
AATTGTTGT----AACAACAATT |
|
|
all_m485_AAV28_RS13115_m5 |
AAV28_RS13115_m5 |
cluster_324 |
all |
16 |
12.48 |
60 |
+++GATG----AGAAA |
TTTCT----CATC+++ |
|
|
all_m604_AAV28_RS15740_m4 |
AAV28_RS15740_m4 |
cluster_81 |
all |
23 |
12.09 |
444 |
+ATATAd---------wATA+++ |
+++TATW---------HTATAT+ |
|
|
all_m1243_AAV28_RS30630_m3 |
AAV28_RS30630_m3 |
cluster_248 |
all |
29 |
11.09 |
57 |
GTTA------------------GGAT+++ |
+++ATCC------------------TAAC |
|
|
all_m290_AAV28_RS08150_m5 |
AAV28_RS08150_m5 |
cluster_56 |
all |
14 |
11.09 |
151 |
+GGGA---GCTC++ |
++GAGC---TCCC+ |
|
|
all_m696_AAV28_RS16665_m1 |
AAV28_RS16665_m1 |
cluster_34 |
all |
23 |
26.34 |
350 |
GACTGAACGATCGATCGAT++++ |
++++ATCGATCGATCGTTCAGTC |
|
|
all_m860_AAV28_RS20735_m5 |
AAV28_RS20735_m5 |
cluster_246 |
all |
12 |
14.76 |
435 |
CATTGCGGCAA+ |
+TTGCCGCAATG |
|
|
all_m104_AAV28_RS02645_m4 |
AAV28_RS02645_m4 |
cluster_81 |
all |
23 |
17.44 |
307 |
CATATG---------KCATATA+ |
+TATATGM---------CATATG |
|
|
all_m439_AAV28_RS12120_m4 |
AAV28_RS12120_m4 |
cluster_71 |
all |
19 |
23.59 |
563 |
GCGGCCGGaTCCGGCCGC+ |
+GCGGCCGGATCCGGCCGC |
|
|
all_m1015_AAV28_RS24325_m5 |
AAV28_RS24325_m5 |
cluster_1 |
all |
26 |
13.86 |
350 |
++++++ATTAT---ATATA+++++++ |
+++++++TATAT---ATAAT++++++ |
|
|
all_m419_AAV28_RS11950_m4 |
AAV28_RS11950_m4 |
cluster_245 |
all |
19 |
11.76 |
513 |
+AATCS--------SGATT |
AATCs--------sGATT+ |
|
|
all_m143_AAV28_RS03140_m3 |
AAV28_RS03140_m3 |
cluster_44 |
all |
18 |
24.33 |
351 |
CAGTGCAAATKTGCACTG |
CAGTGCAMATTTGCACTG |
|
|
all_m365_AAV28_RS10400_m5 |
AAV28_RS10400_m5 |
cluster_203 |
all |
16 |
10.47 |
239 |
++CGCS-----CTAT+ |
+ATAG-----SGCG++ |
|
|
all_m790_AAV28_RS18390_m5 |
AAV28_RS18390_m5 |
cluster_268 |
all |
13 |
12.48 |
52 |
TCCAA---TGAA+ |
+TTCA---TTGGA |
|
|
all_m1391_AAV28_RS34825_m1 |
AAV28_RS34825_m1 |
cluster_253 |
all |
11 |
14.23 |
204 |
CAAGGcATAGC |
GCTATGCCTTG |
|
|
all_m244_AAV28_RS07410_m4 |
AAV28_RS07410_m4 |
cluster_31 |
all |
14 |
11.92 |
293 |
GTCG----CCGGC+ |
+GCCGG----CGAC |
|
|
all_m209_AAV28_RS06935_m4 |
AAV28_RS06935_m4 |
cluster_221 |
all |
22 |
8.63 |
179 |
+++CCC----------yCTC++ |
++GAGR----------GGG+++ |
|
|
all_m207_AAV28_RS06935_m2 |
AAV28_RS06935_m2 |
cluster_264 |
all |
21 |
15.56 |
179 |
GCCAGr---------GGGGCG |
CGCCCC---------YCTGGC |
|
|
all_m545_AAV28_RS14160_m5 |
AAV28_RS14160_m5 |
cluster_45 |
all |
19 |
11.44 |
524 |
+AATAA--------kATG+ |
+CATM--------TTATT+ |
|
|
all_m1197_AAV28_RS29605_m2 |
AAV28_RS29605_m2 |
cluster_340 |
all |
21 |
29.11 |
223 |
TTTCGATTAATCGATAAATCG |
CGATTTATCGATTAATCGAAA |
|
|
all_m88_AAV28_RS02450_m3 |
AAV28_RS02450_m3 |
cluster_198 |
all |
24 |
13.86 |
106 |
+TTTGA-------------TTTTT |
AAAAA-------------TCAAA+ |
|
|
all_m1495_AAV28_RS38375_m5 |
AAV28_RS38375_m5 |
cluster_105 |
all |
19 |
11.09 |
317 |
ATCGA---------CAA++ |
++TTG---------TCGAT |
|
|
all_m620_AAV28_RS15830_m5 |
AAV28_RS15830_m5 |
cluster_227 |
all |
27 |
26.34 |
350 |
++++++CCCCGCCCGCCGGGGGGCG++ |
++CGCCCCCCGGCGGGCGGGG++++++ |
|
|
all_m858_AAV28_RS20735_m3 |
AAV28_RS20735_m3 |
cluster_225 |
all |
19 |
13.86 |
157 |
TTGC-------TGACGG++ |
++CCGTCA-------GCAA |
|
|
all_m447_AAV28_RS12315_m2 |
AAV28_RS12315_m2 |
cluster_144 |
all |
25 |
33.98 |
434 |
GGCATCTGGYATACCAGATGCCAAA |
TTTGGCATCTGGTATrCCAGATGCC |
|
|
all_m1329_AAV28_RS32510_m4 |
AAV28_RS32510_m4 |
cluster_80 |
all |
16 |
10.40 |
136 |
+ATTk-AATA++++++ |
++++++TATT-MAAT+ |
|
|
all_m962_AAV28_RS23085_m2 |
AAV28_RS23085_m2 |
cluster_1 |
all |
26 |
16.66 |
294 |
++++++AATATW--WTATATT+++++ |
+++++AATATAw--wATATT++++++ |
|
|
all_m915_AAV28_RS21965_m5 |
AAV28_RS21965_m5 |
cluster_115 |
all |
10 |
12.48 |
350 |
GGCTTAACG+ |
+CGTTAAGCC |
|
|
all_m1403_AAV28_RS35015_m3 |
AAV28_RS35015_m3 |
cluster_36 |
all |
11 |
11.28 |
299 |
+TGATWATCC+ |
+GGATwATCA+ |
|
|
all_m1091_AAV28_RS26085_m1 |
AAV28_RS26085_m1 |
cluster_152 |
all |
19 |
14.59 |
140 |
++++CATTY-ACTTGC+++ |
+++GCAAGT-rAATG++++ |
|
|
all_m869_AAV28_RS20945_m4 |
AAV28_RS20945_m4 |
cluster_136 |
all |
11 |
12.48 |
83 |
+TCTGTCAAA+ |
+TTTGACAGA+ |
|
|
all_m234_AAV28_RS07385_m4 |
AAV28_RS07385_m4 |
cluster_61 |
all |
11 |
15.25 |
350 |
AATTTGTTAAC |
GTTAACAAATT |
|
|
all_m941_AAV28_RS22700_m1 |
AAV28_RS22700_m1 |
cluster_21 |
all |
13 |
15.90 |
321 |
TGGGAAHYTTTTT |
AAAAArdTTCCCA |
|
|
all_m607_AAV28_RS15805_m2 |
AAV28_RS15805_m2 |
cluster_216 |
all |
24 |
12.14 |
361 |
++GACGb-----------kGCGC+ |
+GCGCM-----------VCGTC++ |
|
|
all_m1023_AAV28_RS24520_m3 |
AAV28_RS24520_m3 |
cluster_66 |
all |
11 |
11.09 |
75 |
++GAACTGCT+ |
+AGCAGTTC++ |
|
|
all_m877_AAV28_RS21195_m2 |
AAV28_RS21195_m2 |
cluster_181 |
all |
19 |
21.89 |
498 |
TTGCTGCRSCGCAGCAA++ |
++TTGCTGCGsyGCAGCAA |
|
|
all_m1322_AAV28_RS32435_m2 |
AAV28_RS32435_m2 |
cluster_118 |
all |
28 |
15.97 |
560 |
+CGCCGCC--------------sGCCC+ |
+GGGCS--------------GGCGGCG+ |
|
|
all_m431_AAV28_RS11985_m1 |
AAV28_RS11985_m1 |
cluster_50 |
all |
17 |
15.25 |
318 |
TATTw-----wATAATA |
TATTATW-----WAATA |
|
|
all_m1085_AAV28_RS25830_m5 |
AAV28_RS25830_m5 |
cluster_10 |
all |
21 |
19.43 |
252 |
CGATTAM-----RGGTAATC+ |
+GATTACCy-----kTAATCG |
|
|
all_m719_AAV28_RS17410_m4 |
AAV28_RS17410_m4 |
cluster_292 |
all |
15 |
10.48 |
236 |
++CGAY----CGTC+ |
+GACG----RTCG++ |
|
|
all_m1382_AAV28_RS34190_m2 |
AAV28_RS34190_m2 |
cluster_78 |
all |
20 |
16.65 |
105 |
+CAAGAR------KTTTGCG |
CGCAAAm------yTCTTG+ |
|
|
all_m731_AAV28_RS17680_m1 |
AAV28_RS17680_m1 |
cluster_121 |
all |
19 |
23.57 |
140 |
GCTCGTCCCA--ATCGAGC |
GCTCGAT--TGGGACGAGC |
|
|
all_m608_AAV28_RS15805_m3 |
AAV28_RS15805_m3 |
cluster_85 |
all |
21 |
14.47 |
508 |
+GCGTGh--------dCACGC |
GCGTGH--------DCACGC+ |
|
|
all_m785_AAV28_RS18380_m5 |
AAV28_RS18380_m5 |
cluster_29 |
all |
28 |
14.19 |
317 |
++CCTCY-------------GCGCGC++ |
++GCGCGC-------------rGAGG++ |
|
|
all_m39_AAV28_RS01975_m4 |
AAV28_RS01975_m4 |
cluster_220 |
all |
11 |
12.48 |
311 |
++CCACGAAAC |
GTTTCGTGG++ |
|
|
all_m347_AAV28_RS10255_m2 |
AAV28_RS10255_m2 |
cluster_384 |
all |
25 |
13.17 |
143 |
TCGAA---------------mGTAG |
CTACK---------------TTCGA |
|
|
all_m109_AAV28_RS02685_m4 |
AAV28_RS02685_m4 |
cluster_185 |
all |
24 |
20.27 |
449 |
CAGATGCAAT-GCATC++++++++ |
++++++++GATGC-ATTGCATCTG |
|
|
all_m153_AAV28_RS03590_m3 |
AAV28_RS03590_m3 |
cluster_323 |
all |
7 |
9.08 |
265 |
CAAwGCG |
CGCWTTG |
|
|
all_m1136_AAV28_RS28315_m1 |
AAV28_RS28315_m1 |
cluster_217 |
all |
21 |
24.95 |
350 |
+++ATAATTTTTCGAAATTCG |
CGAATTTCGAAAAATTAT+++ |
|
|
all_m163_AAV28_RS04825_m3 |
AAV28_RS04825_m3 |
cluster_36 |
all |
11 |
11.09 |
155 |
+GGAT-ATCC+ |
+GGAT-ATCC+ |
|
|
all_m976_AAV28_RS23200_m1 |
AAV28_RS23200_m1 |
cluster_167 |
all |
24 |
13.87 |
290 |
+++CGCGm----------rGGACA |
TGTCCY----------KCGCG+++ |
|
|
all_m920_AAV28_RS22250_m5 |
AAV28_RS22250_m5 |
cluster_11 |
all |
16 |
15.96 |
335 |
++TAAATY-ATTTTA+ |
+TAAAAT-rATTTA++ |
|
|
all_m138_AAV28_RS03080_m3 |
AAV28_RS03080_m3 |
cluster_335 |
all |
26 |
13.86 |
128 |
GATCG---------------TGGCG+ |
+CGCCA---------------CGATC |
|
|
all_m864_AAV28_RS20795_m4 |
AAV28_RS20795_m4 |
cluster_353 |
all |
14 |
19.41 |
106 |
GAGCGATCGCTCCC |
GGGAGCGATCGCTC |
|
|
all_m2_AAV28_RS00905_m2 |
AAV28_RS00905_m2 |
cluster_337 |
all |
22 |
18.02 |
199 |
GAGGTCGC---------CGATC |
GATCG---------GCGACCTC |
|
|
all_m738_AAV28_RS17775_m3 |
AAV28_RS17775_m3 |
cluster_79 |
all |
28 |
11.09 |
65 |
TGGC------------------CATC++ |
++GATG------------------GCCA |
|
|
all_m1048_AAV28_RS25120_m3 |
AAV28_RS25120_m3 |
cluster_272 |
all |
31 |
28.46 |
855 |
+++++TTTATATtkAAATATATTATAT++++ |
++++ATATAATATATTTMAATATAAA+++++ |
|
|
all_m295_AAV28_RS08350_m5 |
AAV28_RS08350_m5 |
cluster_46 |
all |
13 |
16.03 |
119 |
+CCCCSCAAATTC |
GAATTTGSGGGG+ |
|
|
all_m361_AAV28_RS10400_m1 |
AAV28_RS10400_m1 |
cluster_161 |
all |
20 |
11.71 |
253 |
CGCCk-------bGGAA+++ |
+++TTCCV-------MGGCG |
|
|
all_m1238_AAV28_RS30570_m3 |
AAV28_RS30570_m3 |
cluster_236 |
all |
14 |
12.67 |
490 |
TCTCS----SGAGA |
TCTCS----SGAGA |
|
|
all_m972_AAV28_RS23160_m2 |
AAV28_RS23160_m2 |
cluster_204 |
all |
10 |
8.32 |
213 |
++GGAGGA++ |
++TCCTCC++ |
|
|
all_m6_AAV28_RS01065_m1 |
AAV28_RS01065_m1 |
cluster_196 |
all |
20 |
19.41 |
350 |
+GGCGCCC-----TGACGCC |
GGCGTCA-----GGGCGCC+ |
|
|
all_m1207_AAV28_RS29730_m2 |
AAV28_RS29730_m2 |
cluster_104 |
all |
18 |
14.73 |
731 |
GCTCTS------AGAGAG |
CTCTCt------sAGAGC |
|
|
all_m626_AAV28_RS15910_m1 |
AAV28_RS15910_m1 |
cluster_52 |
all |
16 |
13.86 |
223 |
+++CTTGACGGCA+++ |
+++TGCCGTCAAG+++ |
|
|
all_m662_AAV28_RS16470_m2 |
AAV28_RS16470_m2 |
cluster_284 |
all |
10 |
11.09 |
161 |
+TCGGGGGC+ |
+GCCCCCGA+ |
|
|
all_m1224_AAV28_RS30335_m4 |
AAV28_RS30335_m4 |
cluster_10 |
all |
21 |
17.03 |
650 |
+GGTTAA------RTTAACC+ |
+GGTTAAy------TTAACC+ |
|
|
all_m25_AAV28_RS01495_m5 |
AAV28_RS01495_m5 |
cluster_130 |
all |
18 |
18.02 |
170 |
+ATCATAAGCATAC++++ |
++++GTATGCTTATGAT+ |
|
|
all_m759_AAV28_RS17935_m4 |
AAV28_RS17935_m4 |
cluster_91 |
all |
12 |
13.20 |
149 |
TATGWCATTT++ |
++AAATGwCATA |
|
|
all_m1113_AAV28_RS27295_m3 |
AAV28_RS27295_m3 |
cluster_233 |
all |
12 |
14.20 |
774 |
CGCTsCAAGCC+ |
+GGCTTGSAGCG |
|
|
all_m597_AAV28_RS15625_m2 |
AAV28_RS15625_m2 |
cluster_140 |
all |
16 |
13.86 |
224 |
+CCCCG-----GCCTT |
AAGGC-----CGGGG+ |
|
|
all_m564_AAV28_RS14395_m4 |
AAV28_RS14395_m4 |
cluster_143 |
all |
20 |
14.63 |
87 |
TGACG---------SGCGGG |
CCCGCS---------CGTCA |
|
|
all_m221_AAV28_RS07275_m1 |
AAV28_RS07275_m1 |
cluster_68 |
all |
27 |
12.59 |
229 |
TCGAY-----------------sGTCG |
CGACS-----------------RTCGA |
|
|
all_m291_AAV28_RS08350_m1 |
AAV28_RS08350_m1 |
cluster_168 |
all |
11 |
13.86 |
117 |
+TTCGCGCAGG |
CCTGCGCGAA+ |
|
|
all_m339_AAV28_RS09930_m4 |
AAV28_RS09930_m4 |
cluster_155 |
all |
20 |
9.70 |
100 |
+TTT---------GCAA+++ |
+++TTGC---------AAA+ |
|
|
all_m775_AAV28_RS18275_m5 |
AAV28_RS18275_m5 |
cluster_66 |
all |
11 |
13.86 |
189 |
TTGAACCGCT+ |
+AGCGGTTCAA |
|
|
all_m156_AAV28_RS03835_m1 |
AAV28_RS03835_m1 |
cluster_298 |
all |
26 |
15.87 |
516 |
GGCAAGB------------BTTGCC+ |
+GGCAAv------------vCTTGCC |
|
|
all_m1177_AAV28_RS29015_m2 |
AAV28_RS29015_m2 |
cluster_329 |
all |
19 |
19.47 |
116 |
CTTTCCY----RGGGAAAG |
CTTTCCCy----rGGAAAG |
|
|
all_m769_AAV28_RS18050_m4 |
AAV28_RS18050_m4 |
cluster_11 |
all |
16 |
12.54 |
852 |
++AAAAA---tTTAG+ |
+CTAAA---TTTTT++ |
|
|
all_m614_AAV28_RS15810_m4 |
AAV28_RS15810_m4 |
cluster_175 |
all |
24 |
19.73 |
315 |
CGCGTCv---------AGGACGCG |
CGCGTCCT---------BGACGCG |
|
|
all_m150_AAV28_RS03560_m5 |
AAV28_RS03560_m5 |
cluster_201 |
all |
20 |
20.11 |
291 |
++ACCCCAT---YATGGGGT |
ACCCCATr---ATGGGGT++ |
|
|
all_m1321_AAV28_RS32435_m1 |
AAV28_RS32435_m1 |
cluster_118 |
all |
28 |
14.99 |
587 |
CCGCCg---------------sCGCCA+ |
+TGGCGS---------------CGGCGG |
|
|
all_m1516_AAV28_RS39745_m1 |
AAV28_RS39745_m1 |
cluster_48 |
all |
19 |
13.18 |
272 |
CTGTG-------WTCAG++ |
++CTGAw-------CACAG |
|
|
all_m677_AAV28_RS16560_m2 |
AAV28_RS16560_m2 |
cluster_336 |
all |
9 |
12.48 |
114 |
TTAAGTCAG |
CTGACTTAA |
|
|
all_m145_AAV28_RS03140_m5 |
AAV28_RS03140_m5 |
cluster_155 |
all |
20 |
12.48 |
88 |
++++GCAC----TGCAA+++ |
+++TTGCA----GTGC++++ |
|
|
all_m655_AAV28_RS16320_m5 |
AAV28_RS16320_m5 |
cluster_81 |
all |
23 |
16.65 |
629 |
+ATATTw---------TTTAATA |
TATTAAA---------WAATAT+ |
|
|
all_m1314_AAV28_RS32185_m4 |
AAV28_RS32185_m4 |
cluster_247 |
all |
21 |
14.58 |
51 |
AGGCA---------WTGCCT+ |
+AGGCAw---------TGCCT |
|
|
all_m816_AAV28_RS19540_m1 |
AAV28_RS19540_m1 |
cluster_161 |
all |
20 |
13.17 |
181 |
TTGCM--------GGGCG++ |
++CGCCC--------kGCAA |
|
|
all_m1389_AAV28_RS34355_m4 |
AAV28_RS34355_m4 |
cluster_41 |
all |
15 |
18.72 |
244 |
GTCAGY-TTGTTGAC |
GTCAACAA-rCTGAC |
|
|
all_m1253_AAV28_RS31045_m3 |
AAV28_RS31045_m3 |
cluster_3 |
all |
16 |
16.64 |
94 |
+++CCCCGGAATGAC+ |
+GTCATTCCGGGG+++ |
|
|
all_m638_AAV28_RS16150_m3 |
AAV28_RS16150_m3 |
cluster_91 |
all |
12 |
13.86 |
133 |
+AATGTCAAAA+ |
+TTTTGACATT+ |
|
|
all_m182_AAV28_RS06055_m2 |
AAV28_RS06055_m2 |
cluster_4 |
all |
10 |
11.09 |
173 |
CAAGCAAG++ |
++CTTGCTTG |
|
|
all_m318_AAV28_RS09240_m3 |
AAV28_RS09240_m3 |
cluster_106 |
all |
30 |
16.97 |
273 |
++GGATGCC---------------WTCCCA |
TGGGAw---------------GGCATCC++ |
|
|
all_m698_AAV28_RS16665_m3 |
AAV28_RS16665_m3 |
cluster_34 |
all |
23 |
31.88 |
350 |
GACTGAACGATCGATCGGTCAGT |
ACTGACCGATCGATCGTTCAGTC |
|
|
all_m859_AAV28_RS20735_m4 |
AAV28_RS20735_m4 |
cluster_179 |
all |
9 |
9.73 |
842 |
+GGCsGCAA |
TTGCSGCC+ |
|
|
all_m1162_AAV28_RS28725_m2 |
AAV28_RS28725_m2 |
cluster_48 |
all |
19 |
16.70 |
893 |
+++TGAAAmGGTTTCA+++ |
+++TGAAACCKTTTCA+++ |
|
|
all_m359_AAV28_RS10315_m4 |
AAV28_RS10315_m4 |
cluster_267 |
all |
11 |
10.43 |
94 |
++GCAA-kCAA |
TTGM-TTGC++ |
|
|
all_m1287_AAV28_RS31795_m2 |
AAV28_RS31795_m2 |
cluster_176 |
all |
28 |
11.09 |
83 |
GATT------------------ATAT++ |
++ATAT------------------AATC |
|
|
all_m192_AAV28_RS06460_m2 |
AAV28_RS06460_m2 |
cluster_81 |
all |
23 |
12.49 |
334 |
TATAy----------rTATA+++ |
+++TATAY----------RTATA |
|
|
all_m1358_AAV28_RS33735_m3 |
AAV28_RS33735_m3 |
cluster_57 |
all |
26 |
20.21 |
482 |
GGGGGGG-----------RGAGGGGT |
ACCCCTCY-----------CCCCCCC |
|
|
all_m470_AAV28_RS12765_m5 |
AAV28_RS12765_m5 |
cluster_99 |
all |
14 |
19.41 |
115 |
GATTGTCGCCAAAT |
ATTTGGCGACAATC |
|
|
all_m919_AAV28_RS22250_m4 |
AAV28_RS22250_m4 |
cluster_120 |
all |
15 |
13.17 |
484 |
+++TAAW--GAATTT |
AAATTC--wTTA+++ |
|
|
all_m756_AAV28_RS17935_m1 |
AAV28_RS17935_m1 |
cluster_53 |
all |
15 |
20.79 |
165 |
TATATGTCATAAATG |
CATTTATGACATATA |
|
|
all_m793_AAV28_RS18460_m3 |
AAV28_RS18460_m3 |
cluster_364 |
all |
29 |
40.20 |
273 |
TCATATATCTTATATTATAATATAAGATC |
GATCTTATATTATAATATAAGATATATGA |
|
|
all_m131_AAV28_RS03045_m1 |
AAV28_RS03045_m1 |
cluster_173 |
all |
14 |
14.08 |
433 |
+AGATC-sCGCGC+ |
+GCGCGS-GATCT+ |
|
|
all_m512_AAV28_RS13725_m2 |
AAV28_RS13725_m2 |
cluster_7 |
all |
15 |
12.48 |
158 |
++++CGATC--GTGG |
CCAC--GATCG++++ |
|
|
all_m1491_AAV28_RS38375_m1 |
AAV28_RS38375_m1 |
cluster_105 |
all |
19 |
13.96 |
321 |
GTTTGC-------WTCGCT |
AGCGAw-------gCAAAC |
|
|
all_m836_AAV28_RS20445_m1 |
AAV28_RS20445_m1 |
cluster_124 |
all |
12 |
12.53 |
282 |
CGGGs-rGGAC+ |
+GTCCY-SCCCG |
|
|
all_m1161_AAV28_RS28725_m1 |
AAV28_RS28725_m1 |
cluster_48 |
all |
19 |
13.99 |
893 |
+++TGAAAm-kTTTCA+++ |
+++TGAAAM-KTTTCA+++ |
|
|
all_m1028_AAV28_RS24585_m3 |
AAV28_RS24585_m3 |
cluster_72 |
all |
12 |
13.18 |
88 |
+AATCGTWCAT+ |
+ATGwACGATT+ |
|
|
all_m1505_AAV28_RS39075_m5 |
AAV28_RS39075_m5 |
cluster_245 |
all |
19 |
13.86 |
103 |
+ATTCG-------CGAAT+ |
+ATTCG-------CGAAT+ |
|
|
all_m1266_AAV28_RS31410_m1 |
AAV28_RS31410_m1 |
cluster_195 |
all |
18 |
15.56 |
195 |
ATCGTC------dGACGT |
ACGTCH------GACGAT |
|
|
all_m1196_AAV28_RS29605_m1 |
AAV28_RS29605_m1 |
cluster_340 |
all |
21 |
18.02 |
223 |
+++++++TAATCGATTAATC+ |
+GATTAATCGATTA+++++++ |
|
|
all_m28_AAV28_RS01725_m3 |
AAV28_RS01725_m3 |
cluster_196 |
all |
20 |
11.09 |
350 |
CGGC-----------GCGG+ |
+CCGC-----------GCCG |
|
|
all_m936_AAV28_RS22405_m1 |
AAV28_RS22405_m1 |
cluster_67 |
all |
12 |
11.43 |
611 |
+GTTTT-YTTTT |
AAAAr-aAAAC+ |
|
|
all_m461_AAV28_RS12750_m1 |
AAV28_RS12750_m1 |
cluster_120 |
all |
15 |
15.25 |
283 |
+++AAAATGGAACT+ |
+AGTTCCATTTT+++ |
|
|
all_m909_AAV28_RS21875_m4 |
AAV28_RS21875_m4 |
cluster_237 |
all |
11 |
10.62 |
425 |
CGAT--GGCA+ |
+TGCC--ATCG |
|
|
all_m1500_AAV28_RS38785_m5 |
AAV28_RS38785_m5 |
cluster_122 |
all |
16 |
20.15 |
138 |
TGGAACGATArTTCC+ |
+GGAAYTATCGTTCCA |
|
|
all_m354_AAV28_RS10310_m4 |
AAV28_RS10310_m4 |
cluster_172 |
all |
11 |
13.86 |
350 |
TTCTTACGGA+ |
+TCCGTAAGAA |
|
|
all_m1509_AAV28_RS39495_m4 |
AAV28_RS39495_m4 |
cluster_130 |
all |
18 |
18.40 |
232 |
+++AATATRCATATATG+ |
+CATATATGyATATT+++ |
|
|
all_m147_AAV28_RS03560_m2 |
AAV28_RS03560_m2 |
cluster_110 |
all |
17 |
13.86 |
177 |
++CGCG-----CACGAC |
GTCGTG-----CGCG++ |
|
|
all_m1240_AAV28_RS30570_m5 |
AAV28_RS30570_m5 |
cluster_236 |
all |
14 |
10.44 |
245 |
+CTCC-----rAGC |
GCTY-----GGAG+ |
|
|
all_m747_AAV28_RS17810_m2 |
AAV28_RS17810_m2 |
cluster_67 |
all |
12 |
11.80 |
126 |
++AAACyATAA+ |
+TTATRGTTT++ |
|
|
all_m880_AAV28_RS21195_m5 |
AAV28_RS21195_m5 |
cluster_6 |
all |
9 |
12.48 |
121 |
TCAAACTGC |
GCAGTTTGA |
|
|
all_m1237_AAV28_RS30570_m2 |
AAV28_RS30570_m2 |
cluster_184 |
all |
10 |
12.48 |
287 |
+GCGTCACGC |
GCGTGACGC+ |
|
|
all_m1088_AAV28_RS25875_m3 |
AAV28_RS25875_m3 |
cluster_90 |
all |
10 |
13.86 |
190 |
TATCTTTACG |
CGTAAAGATA |
|
|
all_m399_AAV28_RS11695_m4 |
AAV28_RS11695_m4 |
cluster_220 |
all |
11 |
13.86 |
350 |
TGTCACGAAA+ |
+TTTCGTGACA |
|
|
all_m1535_AAV28_RS40420_m5 |
AAV28_RS40420_m5 |
cluster_127 |
all |
11 |
11.09 |
136 |
AATACGGG+++ |
+++CCCGTATT |
|
|
all_m195_AAV28_RS06460_m5 |
AAV28_RS06460_m5 |
cluster_265 |
all |
13 |
15.25 |
350 |
++ATTATACGCGC |
GCGCGTATAAT++ |
|
|
all_m1080_AAV28_RS25790_m5 |
AAV28_RS25790_m5 |
cluster_12 |
all |
14 |
11.09 |
350 |
++++ATATATTA++ |
++TAATATAT++++ |
|
|
all_m694_AAV28_RS16610_m4 |
AAV28_RS16610_m4 |
cluster_360 |
all |
14 |
16.05 |
181 |
CAACAA--RACAAA |
TTTGTY--TTGTTG |
|
|
all_m1431_AAV28_RS36105_m1 |
AAV28_RS36105_m1 |
cluster_305 |
all |
27 |
11.09 |
72 |
GACG------------------TGAC+ |
+GTCA------------------CGTC |
|
|
all_m619_AAV28_RS15830_m4 |
AAV28_RS15830_m4 |
cluster_164 |
all |
15 |
18.35 |
875 |
+CCCsGCCGGGCGGC |
GCCGCCCGGCSGGG+ |
|
|
all_m500_AAV28_RS13495_m5 |
AAV28_RS13495_m5 |
cluster_1 |
all |
26 |
11.95 |
270 |
+++++++++TATTGA-TAT+++++++ |
+++++++ATA-TCAATA+++++++++ |
|
|
all_m127_AAV28_RS02970_m2 |
AAV28_RS02970_m2 |
cluster_184 |
all |
10 |
11.09 |
296 |
+CTGTCACG+ |
+CGTGACAG+ |
|
|
all_m1101_AAV28_RS26270_m1 |
AAV28_RS26270_m1 |
cluster_82 |
all |
22 |
12.83 |
314 |
CCGCCv-----------kGGAG |
CTCCM-----------BGGCGG |
|
|
all_m523_AAV28_RS13855_m3 |
AAV28_RS13855_m3 |
cluster_14 |
all |
20 |
16.01 |
139 |
+++CCATTGW---AAGGA++ |
++TCCTT---WCAATGG+++ |
|
|
all_m1122_AAV28_RS27825_m2 |
AAV28_RS27825_m2 |
cluster_1 |
all |
26 |
11.09 |
134 |
++++++AATTW-----WTAT++++++ |
++++++ATAw-----wAATT++++++ |
|
|
all_m1186_AAV28_RS29085_m1 |
AAV28_RS29085_m1 |
cluster_11 |
all |
16 |
13.86 |
275 |
++++AAATCAATTT++ |
++AAATTGATTT++++ |
|
|
all_m427_AAV28_RS11970_m2 |
AAV28_RS11970_m2 |
cluster_391 |
all |
23 |
29.84 |
494 |
CGAAATATATTCT-rAAAAATAA |
TTATTTTTY-AGAATATATTTCG |
|
|
all_m1102_AAV28_RS26270_m2 |
AAV28_RS26270_m2 |
cluster_147 |
all |
26 |
9.79 |
174 |
CCAR------------------kGAG |
CTCM------------------YTGG |
|
|
all_m1536_AAV28_RS40485_m1 |
AAV28_RS40485_m1 |
cluster_103 |
all |
18 |
15.14 |
459 |
CGCGCs-----GCGCGA+ |
+TCGCGC-----SGCGCG |
|
|
all_m256_AAV28_RS07765_m1 |
AAV28_RS07765_m1 |
cluster_372 |
all |
10 |
13.86 |
88 |
GGGAACGCAG |
CTGCGTTCCC |
|
|
all_m618_AAV28_RS15830_m3 |
AAV28_RS15830_m3 |
cluster_161 |
all |
20 |
15.25 |
253 |
+CCCGCT-------GAGAC+ |
+GTCTC-------AGCGGG+ |
|
|
all_m910_AAV28_RS21875_m5 |
AAV28_RS21875_m5 |
cluster_229 |
all |
13 |
11.09 |
350 |
GCAA---CTTG++ |
++CAAG---TTGC |
|
|
all_m525_AAV28_RS13855_m5 |
AAV28_RS13855_m5 |
cluster_234 |
all |
18 |
11.78 |
95 |
+ATTGW--------ACAT |
ATGT--------wCAAT+ |
|
|
all_m1531_AAV28_RS40420_m1 |
AAV28_RS40420_m1 |
cluster_15 |
all |
14 |
11.62 |
403 |
CCGTAK----ACGG |
CCGt----mTACGG |
|
|
all_m956_AAV28_RS23030_m1 |
AAV28_RS23030_m1 |
cluster_10 |
all |
21 |
17.21 |
709 |
+CGTTAAB-----VTTAACG+ |
+CGTTAAb-----vTTAACG+ |
|
|
all_m1198_AAV28_RS29605_m3 |
AAV28_RS29605_m3 |
cluster_263 |
all |
21 |
14.56 |
223 |
++CGATm-------TCGATT+ |
+AATCGA-------KATCG++ |
|
|
all_m353_AAV28_RS10310_m3 |
AAV28_RS10310_m3 |
cluster_172 |
all |
11 |
15.25 |
350 |
TTCTTACGGGG |
CCCCGTAAGAA |
|
|
all_m483_AAV28_RS13115_m3 |
AAV28_RS13115_m3 |
cluster_83 |
all |
11 |
14.20 |
199 |
GTATwCCAGAA |
TTCTGGWATAC |
|
|
all_m1200_AAV28_RS29605_m5 |
AAV28_RS29605_m5 |
cluster_39 |
all |
10 |
9.70 |
200 |
GATCGAT+++ |
+++ATCGATC |
|
|
all_m1072_AAV28_RS25580_m2 |
AAV28_RS25580_m2 |
cluster_2 |
all |
19 |
22.18 |
350 |
+++GGAATCTCGAGATTCC |
GGAATCTCGAGATTCC+++ |
|
|
all_m1305_AAV28_RS32075_m5 |
AAV28_RS32075_m5 |
cluster_64 |
all |
11 |
11.09 |
73 |
TGGG-TAGA++ |
++TCTA-CCCA |
|
|
all_m843_AAV28_RS20595_m3 |
AAV28_RS20595_m3 |
cluster_82 |
all |
22 |
12.48 |
120 |
GCGGC------------AGGA+ |
+TCCT------------GCCGC |
|
|
all_m603_AAV28_RS15740_m3 |
AAV28_RS15740_m3 |
cluster_81 |
all |
23 |
11.09 |
170 |
+ATAT-----------AATA+++ |
+++TATT-----------ATAT+ |
|
|
all_m1351_AAV28_RS33490_m1 |
AAV28_RS33490_m1 |
cluster_273 |
all |
28 |
12.85 |
309 |
CCCGGs---------------dCACG++ |
++CGTGH---------------SCCGGG |
|
|
all_m424_AAV28_RS11965_m4 |
AAV28_RS11965_m4 |
cluster_217 |
all |
21 |
14.17 |
341 |
++++++GATh---GAAATAT+ |
+ATATTTC---DATC++++++ |
|
|
all_m241_AAV28_RS07410_m1 |
AAV28_RS07410_m1 |
cluster_126 |
all |
17 |
18.83 |
222 |
CCGTCGGS---CGACGG |
CCGTCG---SCCGACGG |
|
|
all_m1401_AAV28_RS35015_m1 |
AAV28_RS35015_m1 |
cluster_36 |
all |
11 |
13.86 |
546 |
CGGATWATCCG |
CGGATwATCCG |
|
|
all_m1408_AAV28_RS35690_m3 |
AAV28_RS35690_m3 |
cluster_61 |
all |
11 |
9.01 |
700 |
++AAAwTTA++ |
++TAAWTTT++ |
|
|
all_m1478_AAV28_RS37720_m3 |
AAV28_RS37720_m3 |
cluster_58 |
all |
17 |
11.09 |
37 |
++++GAAC---TTAG++ |
++CTAA---GTTC++++ |
|
|
all_m1036_AAV28_RS24730_m1 |
AAV28_RS24730_m1 |
cluster_156 |
all |
19 |
14.62 |
513 |
++TGCAA------KGCCAG |
CTGGCM------TTGCA++ |
|
|
all_m729_AAV28_RS17635_m4 |
AAV28_RS17635_m4 |
cluster_28 |
all |
17 |
9.70 |
70 |
+TGA--------ATAC+ |
+GTAT--------TCA+ |
|
|
all_m971_AAV28_RS23160_m1 |
AAV28_RS23160_m1 |
cluster_272 |
all |
31 |
38.82 |
350 |
+++TTTGATATAATATATTTCAATATATCAT |
ATGATATATTGAAATATATTATATCAAA+++ |
|
|
all_m739_AAV28_RS17775_m4 |
AAV28_RS17775_m4 |
cluster_56 |
all |
14 |
16.64 |
82 |
+GAGCCC-ACCCAT |
ATGGGT-GGGCTC+ |
|
|
all_m484_AAV28_RS13115_m4 |
AAV28_RS13115_m4 |
cluster_83 |
all |
11 |
13.86 |
93 |
+TTCTTGTATG |
CATACAAGAA+ |
|
|
all_m246_AAV28_RS07470_m1 |
AAV28_RS07470_m1 |
cluster_77 |
all |
12 |
16.64 |
215 |
AAAAACGGAGGC |
GCCTCCGTTTTT |
|
|
all_m1511_AAV28_RS39675_m1 |
AAV28_RS39675_m1 |
cluster_49 |
all |
17 |
14.56 |
112 |
GAACC----mTCTCG++ |
++CGAGAK----GGTTC |
|
|
all_m1055_AAV28_RS25150_m5 |
AAV28_RS25150_m5 |
cluster_61 |
all |
11 |
8.32 |
132 |
TCA---ATT++ |
++AAT---TGA |
|
|
all_m680_AAV28_RS16560_m5 |
AAV28_RS16560_m5 |
cluster_81 |
all |
23 |
13.86 |
101 |
TCTGA-----------TATAT++ |
++ATATA-----------TCAGA |
|
|
all_m441_AAV28_RS12170_m1 |
AAV28_RS12170_m1 |
cluster_161 |
all |
20 |
9.70 |
350 |
CCCC----------GAG+++ |
+++CTC----------GGGG |
|
|
all_m916_AAV28_RS22250_m1 |
AAV28_RS22250_m1 |
cluster_120 |
all |
15 |
14.56 |
486 |
++TAATTT--WTTTT |
AAAAw--AAATTA++ |
|
|
all_m1226_AAV28_RS30470_m1 |
AAV28_RS30470_m1 |
cluster_92 |
all |
10 |
13.86 |
350 |
GCGATCAAAC |
GTTTGATCGC |
|
|
all_m1339_AAV28_RS33255_m4 |
AAV28_RS33255_m4 |
cluster_93 |
all |
11 |
8.32 |
88 |
TAG---GCG++ |
++CGC---CTA |
|
|
all_m873_AAV28_RS21115_m3 |
AAV28_RS21115_m3 |
cluster_40 |
all |
20 |
18.73 |
187 |
++GCCTGGAY----CCAGGC |
GCCTGG----rTCCAGGC++ |
|
|
all_m973_AAV28_RS23160_m3 |
AAV28_RS23160_m3 |
cluster_1 |
all |
26 |
9.02 |
439 |
+++++AATw-----ATA+++++++++ |
+++++++++TAT-----WATT+++++ |
|
|
all_m304_AAV28_RS08695_m4 |
AAV28_RS08695_m4 |
cluster_30 |
all |
17 |
17.36 |
434 |
+TTTTG--MAATTTTG+ |
+CAAAATTk--CAAAA+ |
|
|
all_m451_AAV28_RS12325_m1 |
AAV28_RS12325_m1 |
cluster_54 |
all |
14 |
12.93 |
709 |
CCAATy---vAATG |
CATTB---RATTGG |
|
|
all_m1449_AAV28_RS36225_m4 |
AAV28_RS36225_m4 |
cluster_89 |
all |
11 |
13.86 |
185 |
+CAATTATTGC |
GCAATAATTG+ |
|
|
all_m991_AAV28_RS23380_m1 |
AAV28_RS23380_m1 |
cluster_88 |
all |
11 |
11.09 |
105 |
+GGTGACAT++ |
++ATGTCACC+ |
|
|
all_m621_AAV28_RS15880_m1 |
AAV28_RS15880_m1 |
cluster_12 |
all |
14 |
15.94 |
307 |
+TTGAWATATCAC+ |
+GTGATATwTCAA+ |
|
|
all_m115_AAV28_RS02770_m5 |
AAV28_RS02770_m5 |
cluster_180 |
all |
24 |
13.20 |
238 |
TTTCCG-----------CGGG+++ |
+++CCCG-----------CGGAAA |
|
|
all_m639_AAV28_RS16150_m4 |
AAV28_RS16150_m4 |
cluster_160 |
all |
15 |
11.09 |
128 |
++TTG----ACCAG+ |
+CTGGT----CAA++ |
|
|
all_m867_AAV28_RS20945_m2 |
AAV28_RS20945_m2 |
cluster_283 |
all |
19 |
23.88 |
242 |
ATTTTKTCAATAAATAAA+ |
+TTTATTTATTGAmAAAAT |
|
|
all_m622_AAV28_RS15880_m2 |
AAV28_RS15880_m2 |
cluster_249 |
all |
26 |
22.18 |
278 |
+++++++TTGAAATATATTTCAA+++ |
+++TTGAAATATATTTCAA+++++++ |
|
|
all_m1213_AAV28_RS29810_m3 |
AAV28_RS29810_m3 |
cluster_1 |
all |
26 |
8.32 |
350 |
++++++++TAT-----ATA+++++++ |
+++++++TAT-----ATA++++++++ |
|
|
all_m560_AAV28_RS14300_m5 |
AAV28_RS14300_m5 |
cluster_101 |
all |
26 |
13.86 |
233 |
GCCGC----------------GGCTC |
GAGCC----------------GCGGC |
|
|
all_m600_AAV28_RS15625_m5 |
AAV28_RS15625_m5 |
cluster_123 |
all |
11 |
12.77 |
405 |
+AAGGvAAGGG |
CCCTTBCCTT+ |
|
|
all_m1291_AAV28_RS31840_m1 |
AAV28_RS31840_m1 |
cluster_120 |
all |
15 |
14.86 |
436 |
++AAAATd-wAATAA |
TTATTW-HATTTT++ |
|
|
all_m1306_AAV28_RS32085_m1 |
AAV28_RS32085_m1 |
cluster_62 |
all |
19 |
14.87 |
196 |
ACCGGV----SCGTCG+++ |
+++CGACGs----bCCGGT |
|
|
all_m570_AAV28_RS14600_m5 |
AAV28_RS14600_m5 |
cluster_312 |
all |
11 |
9.70 |
138 |
CAA---AACG+ |
+CGTT---TTG |
|
|
all_m1354_AAV28_RS33490_m4 |
AAV28_RS33490_m4 |
cluster_8 |
all |
21 |
15.98 |
177 |
++++GCACyCTCTCCC+++++ |
+++++GGGAGAGRGTGC++++ |
|
|
all_m1214_AAV28_RS29810_m4 |
AAV28_RS29810_m4 |
cluster_12 |
all |
14 |
8.32 |
350 |
+++++TTG--ATA+ |
+TAT--CAA+++++ |
|
|
all_m266_AAV28_RS07815_m1 |
AAV28_RS07815_m1 |
cluster_197 |
all |
28 |
12.82 |
175 |
++CGCGs----------------GCAAA |
TTTGC----------------SCGCG++ |
|
|
all_m355_AAV28_RS10310_m5 |
AAV28_RS10310_m5 |
cluster_172 |
all |
11 |
13.86 |
350 |
TTCTTAAGTA+ |
+TACTTAAGAA |
|
|
all_m949_AAV28_RS22715_m4 |
AAV28_RS22715_m4 |
cluster_37 |
all |
27 |
13.86 |
188 |
+CAACG----------------GTTCC |
GGAAC----------------CGTTG+ |
|
|
all_m1453_AAV28_RS36300_m3 |
AAV28_RS36300_m3 |
cluster_52 |
all |
16 |
20.79 |
304 |
CCTGCTGGCAGCATG+ |
+CATGCTGCCAGCAGG |
|
|
all_m499_AAV28_RS13495_m4 |
AAV28_RS13495_m4 |
cluster_1 |
all |
26 |
18.33 |
216 |
++++++TATATTAADTATAT++++++ |
++++++ATATAhTTAATATA++++++ |
|
|
all_m930_AAV28_RS22335_m5 |
AAV28_RS22335_m5 |
cluster_294 |
all |
9 |
11.09 |
126 |
+ACAGGACC |
GGTCCTGT+ |
|
|
all_m1219_AAV28_RS30225_m4 |
AAV28_RS30225_m4 |
cluster_209 |
all |
10 |
11.09 |
138 |
+TTGTTTCG+ |
+CGAAACAA+ |
|
|
all_m544_AAV28_RS14160_m4 |
AAV28_RS14160_m4 |
cluster_1 |
all |
26 |
9.02 |
283 |
+++++++++ATA---wATA+++++++ |
+++++++TATW---TAT+++++++++ |
|
|
all_m216_AAV28_RS07210_m1 |
AAV28_RS07210_m1 |
cluster_204 |
all |
10 |
12.48 |
305 |
+GGGAGGAAC |
GTTCCTCCC+ |
|
|
all_m1220_AAV28_RS30225_m5 |
AAV28_RS30225_m5 |
cluster_134 |
all |
22 |
13.86 |
129 |
TTGT-----------TCTGGA+ |
+TCCAGA-----------ACAA |
|
|
all_m827_AAV28_RS19675_m2 |
AAV28_RS19675_m2 |
cluster_1 |
all |
26 |
11.43 |
114 |
++++++ATTAK----TATA+++++++ |
+++++++TATA----mTAAT++++++ |
|
|
all_m1269_AAV28_RS31410_m4 |
AAV28_RS31410_m4 |
cluster_195 |
all |
18 |
12.48 |
140 |
++CGTC-------GACTT |
AAGTC-------GACG++ |
|
|
all_m634_AAV28_RS16085_m4 |
AAV28_RS16085_m4 |
cluster_136 |
all |
11 |
9.70 |
277 |
+CTTG-CAA++ |
++TTG-CAAG+ |
|
|
all_m580_AAV28_RS14840_m5 |
AAV28_RS14840_m5 |
cluster_67 |
all |
12 |
11.09 |
68 |
CTTG---TTTT+ |
+AAAA---CAAG |
|
|
all_m128_AAV28_RS02970_m3 |
AAV28_RS02970_m3 |
cluster_184 |
all |
10 |
9.70 |
296 |
++CGTCACG+ |
+CGTGACG++ |
|
|
all_m751_AAV28_RS17915_m1 |
AAV28_RS17915_m1 |
cluster_110 |
all |
17 |
14.53 |
294 |
TTCGCs----yCACCC+ |
+GGGTGR----SGCGAA |
|
|
all_m1539_AAV28_RS40485_m4 |
AAV28_RS40485_m4 |
cluster_386 |
all |
16 |
18.02 |
91 |
TGCAAAA---GAACCT |
AGGTTC---TTTTGCA |
|
|
all_m1530_AAV28_RS40400_m5 |
AAV28_RS40400_m5 |
cluster_1 |
all |
26 |
10.41 |
317 |
+++++AATk-----ATAT++++++++ |
++++++++ATAT-----MATT+++++ |
|
|
all_m32_AAV28_RS01755_m2 |
AAV28_RS01755_m2 |
cluster_3 |
all |
16 |
19.41 |
350 |
+CGCCCCGGAATGAC+ |
+GTCATTCCGGGGCG+ |
|
|
all_m588_AAV28_RS14965_m3 |
AAV28_RS14965_m3 |
cluster_97 |
all |
10 |
11.09 |
99 |
+GGTTG-AGA |
TCT-CAACC+ |
|
|
all_m168_AAV28_RS05160_m3 |
AAV28_RS05160_m3 |
cluster_73 |
all |
16 |
10.49 |
242 |
+TCTM----GAAC+++ |
+++GTTC----KAGA+ |
|
|
all_m705_AAV28_RS16910_m5 |
AAV28_RS16910_m5 |
cluster_67 |
all |
12 |
12.48 |
100 |
AAAAGGACA+++ |
+++TGTCCTTTT |
|
|
all_m100_AAV28_RS02615_m5 |
AAV28_RS02615_m5 |
cluster_1 |
all |
26 |
10.53 |
465 |
++++++ATTT---AATA+++++++++ |
+++++++++TATT---AAAT++++++ |
|
|
all_m1144_AAV28_RS28385_m4 |
AAV28_RS28385_m4 |
cluster_176 |
all |
28 |
12.77 |
124 |
GGATV-----------------ATATT+ |
+AATAT-----------------bATCC |
|
|
all_m838_AAV28_RS20445_m3 |
AAV28_RS20445_m3 |
cluster_166 |
all |
12 |
11.80 |
209 |
+CCTTS--GAGC |
GCTC--sAAGG+ |
|
|
all_m1201_AAV28_RS29670_m1 |
AAV28_RS29670_m1 |
cluster_32 |
all |
21 |
17.37 |
105 |
CGCGTC--------rTCAAAA |
TTTTGAY--------GACGCG |
|
|
all_m1343_AAV28_RS33285_m3 |
AAV28_RS33285_m3 |
cluster_307 |
all |
18 |
24.95 |
134 |
ATATAATATACAACTAAA |
TTTAGTTGTATATTATAT |
|
|
all_m985_AAV28_RS23240_m5 |
AAV28_RS23240_m5 |
cluster_61 |
all |
11 |
11.09 |
903 |
+TTAACTTTT+ |
+AAAAgTTAA+ |
|
|
all_m1129_AAV28_RS27990_m4 |
AAV28_RS27990_m4 |
cluster_178 |
all |
21 |
13.17 |
175 |
++CTTs--------GAAACT+ |
+AGTTTC--------SAAG++ |
|
|
all_m268_AAV28_RS07815_m3 |
AAV28_RS07815_m3 |
cluster_197 |
all |
28 |
16.90 |
300 |
TTTGCGs--------------sCGCAAA |
TTTGCGS--------------SCGCAAA |
|
|
all_m999_AAV28_RS23535_m4 |
AAV28_RS23535_m4 |
cluster_275 |
all |
8 |
9.01 |
336 |
+GTCKCCT |
AGGmGAC+ |
|
|
all_m1476_AAV28_RS37720_m1 |
AAV28_RS37720_m1 |
cluster_1 |
all |
26 |
14.23 |
141 |
+++++++ATATA--WTATAT++++++ |
++++++ATATAw--TATAT+++++++ |
|
|
all_m1542_AAV28_RS41180_m2 |
AAV28_RS41180_m2 |
cluster_382 |
all |
21 |
20.92 |
234 |
TCTGTTY-----kGAACAGAC |
GTCTGTTCM-----RAACAGA |
|
|
all_m372_AAV28_RS10455_m2 |
AAV28_RS10455_m2 |
cluster_244 |
all |
10 |
13.86 |
189 |
ATGGCGTTCC |
GGAACGCCAT |
|
|
all_m963_AAV28_RS23085_m3 |
AAV28_RS23085_m3 |
cluster_12 |
all |
14 |
8.32 |
171 |
++++++ATATGA++ |
++TCATAT++++++ |
|
|
all_m62_AAV28_RS02210_m2 |
AAV28_RS02210_m2 |
cluster_235 |
all |
18 |
12.48 |
387 |
+++GCCCS-----SGGGG |
CCCCs-----sGGGC+++ |
|
|
all_m271_AAV28_RS08060_m1 |
AAV28_RS08060_m1 |
cluster_155 |
all |
20 |
11.79 |
167 |
++++ATTGC-----YAAC++ |
++GTTr-----GCAAT++++ |
|
|
all_m1317_AAV28_RS32430_m2 |
AAV28_RS32430_m2 |
cluster_235 |
all |
18 |
13.17 |
139 |
CACGC-------sCGGC+ |
+GCCGS-------GCGTG |
|
|
all_m1318_AAV28_RS32430_m3 |
AAV28_RS32430_m3 |
cluster_88 |
all |
11 |
13.30 |
153 |
CCGTCAAATC+ |
+GATTTGACGG |
|
|
all_m78_AAV28_RS02325_m3 |
AAV28_RS02325_m3 |
cluster_166 |
all |
12 |
11.79 |
169 |
GACTC---rAGC |
GCTY---GAGTC |
|
|
all_m574_AAV28_RS14710_m4 |
AAV28_RS14710_m4 |
cluster_35 |
all |
14 |
18.72 |
116 |
GGGAACCAsAGGGG |
CCCCTSTGGTTCCC |
|
|
all_m1053_AAV28_RS25150_m3 |
AAV28_RS25150_m3 |
cluster_350 |
all |
19 |
18.02 |
253 |
+++CTGACTGACCGAT+++ |
+++ATCGGTCAGTCAG+++ |
|
|
all_m585_AAV28_RS14920_m5 |
AAV28_RS14920_m5 |
cluster_62 |
all |
19 |
16.99 |
448 |
ACCGGCY-----GACGCT+ |
+AGCGTC-----rGCCGGT |
|
|
all_m373_AAV28_RS10455_m3 |
AAV28_RS10455_m3 |
cluster_242 |
all |
8 |
11.09 |
76 |
AACCACCC |
GGGTGGTT |
|
|
all_m133_AAV28_RS03045_m3 |
AAV28_RS03045_m3 |
cluster_173 |
all |
14 |
17.02 |
401 |
GCGATCGC-GCGCA |
TGCGc-GCGATCGC |
|
|
all_m630_AAV28_RS15910_m5 |
AAV28_RS15910_m5 |
cluster_52 |
all |
16 |
13.86 |
222 |
+++CCTGACAGCA+++ |
+++TGCTGTCAGG+++ |
|
|
all_m1076_AAV28_RS25790_m1 |
AAV28_RS25790_m1 |
cluster_1 |
all |
26 |
12.76 |
776 |
++++++++TATTD-ATATA+++++++ |
+++++++TATAT-hAATA++++++++ |
|
|
all_m828_AAV28_RS19675_m3 |
AAV28_RS19675_m3 |
cluster_28 |
all |
17 |
12.81 |
132 |
++CTATG----MTATG+ |
+CATAk----CATAG++ |
|
|
all_m807_AAV28_RS19140_m2 |
AAV28_RS19140_m2 |
cluster_31 |
all |
14 |
13.17 |
313 |
+GCGGr--ACGAC+ |
+GTCGT--YCCGC+ |
|
|
all_m673_AAV28_RS16520_m3 |
AAV28_RS16520_m3 |
cluster_39 |
all |
10 |
10.42 |
161 |
AATmGATA++ |
++TATCKATT |
|
|
all_m374_AAV28_RS10455_m4 |
AAV28_RS10455_m4 |
cluster_242 |
all |
8 |
10.65 |
225 |
AACGCCCC |
GGGGCGTT |
|
|
all_m172_AAV28_RS05390_m2 |
AAV28_RS05390_m2 |
cluster_101 |
all |
26 |
13.86 |
350 |
+CCGCC--------------GGGCT+ |
+AGCCC--------------GGCGG+ |
|
|
all_m188_AAV28_RS06245_m3 |
AAV28_RS06245_m3 |
cluster_3 |
all |
16 |
11.09 |
85 |
+++TTCCGAGT+++++ |
+++++ACTCGGAA+++ |
|
|
all_m706_AAV28_RS17165_m1 |
AAV28_RS17165_m1 |
cluster_3 |
all |
16 |
14.62 |
250 |
GCGCCCC--WATG+++ |
+++CATw--GGGGCGC |
|
|
all_m1345_AAV28_RS33285_m5 |
AAV28_RS33285_m5 |
cluster_232 |
all |
12 |
11.09 |
119 |
TAT-GTTGT+++ |
+++ACAAC-ATA |
|
|
all_m689_AAV28_RS16595_m4 |
AAV28_RS16595_m4 |
cluster_23 |
all |
17 |
16.64 |
73 |
CCCCC-----TTTTCCC |
GGGAAAA-----GGGGG |
|
|
all_m556_AAV28_RS14300_m1 |
AAV28_RS14300_m1 |
cluster_101 |
all |
26 |
9.90 |
233 |
GCCK------------------KCTC |
GAGM------------------MGGC |
|
|
all_m986_AAV28_RS23295_m1 |
AAV28_RS23295_m1 |
cluster_7 |
all |
15 |
16.24 |
190 |
+GCGCGATCtCGCG+ |
+CGCGAGATCGCGC+ |
|
|
all_m1073_AAV28_RS25580_m3 |
AAV28_RS25580_m3 |
cluster_2 |
all |
19 |
26.34 |
350 |
CCCGGAATCTCGAGATTCC |
GGAATCTCGAGATTCCGGG |
|
|
all_m219_AAV28_RS07210_m4 |
AAV28_RS07210_m4 |
cluster_48 |
all |
19 |
10.41 |
201 |
++GTGm------TTCA+++ |
+++TGAA------KCAC++ |
|
|
all_m890_AAV28_RS21410_m5 |
AAV28_RS21410_m5 |
cluster_88 |
all |
11 |
10.44 |
102 |
+GGTwACAT++ |
++ATGTWACC+ |
|
|
all_m1127_AAV28_RS27990_m2 |
AAV28_RS27990_m2 |
cluster_392 |
all |
26 |
35.35 |
363 |
AGTTCCCTCTTGCsCAAGAGGGAAGT |
ACTTCCCTCTTGSGCAAGAGGGAACT |
|
|
all_m862_AAV28_RS20795_m2 |
AAV28_RS20795_m2 |
cluster_281 |
all |
20 |
12.48 |
152 |
++CGCAG---------CGCC |
GGCG---------CTGCG++ |
|
|
all_m111_AAV28_RS02770_m1 |
AAV28_RS02770_m1 |
cluster_180 |
all |
24 |
16.08 |
309 |
+ATTTCCR----------SCGGAA |
TTCCGs----------yGGAAAT+ |
|
|
all_m429_AAV28_RS11970_m4 |
AAV28_RS11970_m4 |
cluster_1 |
all |
26 |
10.43 |
454 |
++++++AATw------ATAT++++++ |
++++++ATAT------WATT++++++ |
|
|
all_m95_AAV28_RS02555_m5 |
AAV28_RS02555_m5 |
cluster_150 |
all |
21 |
11.09 |
81 |
TTTC----------TTTT+++ |
+++AAAA----------GAAA |
|
|
all_m995_AAV28_RS23380_m5 |
AAV28_RS23380_m5 |
cluster_91 |
all |
12 |
15.25 |
105 |
+AATGTCACATT |
AATGTGACATT+ |
|
|
all_m1315_AAV28_RS32185_m5 |
AAV28_RS32185_m5 |
cluster_247 |
all |
21 |
9.70 |
31 |
+++CAT-----------CCTT |
AAGG-----------ATG+++ |
|
|
all_m552_AAV28_RS14265_m2 |
AAV28_RS14265_m2 |
cluster_1 |
all |
26 |
24.98 |
614 |
++ATATTATAw-wAATATATTA++++ |
++++TAATATATTW-WTATAATAT++ |
|
|
all_m1566_AAV28_RS45505_m1 |
AAV28_RS45505_m1 |
cluster_140 |
all |
16 |
15.27 |
350 |
GGCGGS---SGCGGG+ |
+CCCGCs---sCCGCC |
|
|
all_m343_AAV28_RS09975_m3 |
AAV28_RS09975_m3 |
cluster_309 |
all |
11 |
13.86 |
152 |
GACGGC-TCAC |
GTGA-GCCGTC |
|
|
all_m70_AAV28_RS02220_m5 |
AAV28_RS02220_m5 |
cluster_232 |
all |
12 |
15.25 |
196 |
+CAAGAATTATA |
TATAATTCTTG+ |
|
|
all_m1374_AAV28_RS33845_m4 |
AAV28_RS33845_m4 |
cluster_179 |
all |
9 |
9.70 |
69 |
TGG--GCCT |
AGGC--CCA |
|
|
all_m566_AAV28_RS14600_m1 |
AAV28_RS14600_m1 |
cluster_4 |
all |
10 |
12.48 |
242 |
CAAGCGAAG+ |
+CTTCGCTTG |
|
|
all_m1264_AAV28_RS31195_m4 |
AAV28_RS31195_m4 |
cluster_55 |
all |
17 |
18.05 |
350 |
+GTTCCGs--sCGGATC |
GATCCGS--SCGGAAC+ |
|
|
all_m1261_AAV28_RS31195_m1 |
AAV28_RS31195_m1 |
cluster_55 |
all |
17 |
14.55 |
716 |
+GTTCCr----yGGATC |
GATCCR----YGGAAC+ |
|
|
all_m1565_AAV28_RS45430_m5 |
AAV28_RS45430_m5 |
cluster_11 |
all |
16 |
16.92 |
1050 |
ACAAAAAdTAATT+++ |
+++AATTAHTTTTTGT |
|
|
all_m691_AAV28_RS16610_m1 |
AAV28_RS16610_m1 |
cluster_60 |
all |
16 |
20.79 |
260 |
+CCGATTGTTTGTTCT |
AGAACAAACAATCGG+ |
|
|
all_m230_AAV28_RS07350_m5 |
AAV28_RS07350_m5 |
cluster_38 |
all |
13 |
15.25 |
208 |
+AAGCGAAGCAT+ |
+ATGCTTCGCTT+ |
|
|
all_m558_AAV28_RS14300_m3 |
AAV28_RS14300_m3 |
cluster_303 |
all |
20 |
20.79 |
157 |
+++GAGAA-TGGTGGAGAG+ |
+CTCTCCACCA-TTCTC+++ |
|
|
all_m9_AAV28_RS01065_m4 |
AAV28_RS01065_m4 |
cluster_196 |
all |
20 |
11.48 |
648 |
+GGCG----------rCGAC |
GTCGY----------CGCC+ |
|
|
all_m804_AAV28_RS18940_m4 |
AAV28_RS18940_m4 |
cluster_8 |
all |
21 |
20.79 |
350 |
++++CCCCCTCCCCCCAAG++ |
++CTTGGGGGGAGGGGG++++ |
|
|
all_m876_AAV28_RS21195_m1 |
AAV28_RS21195_m1 |
cluster_181 |
all |
19 |
16.77 |
387 |
GTTGCK--KCAGCAA++++ |
++++TTGCTGM--mGCAAC |
|
|
all_m1308_AAV28_RS32085_m3 |
AAV28_RS32085_m3 |
cluster_169 |
all |
11 |
13.86 |
164 |
+TGGGGTATAT |
ATATACCCCA+ |
|
|
all_m389_AAV28_RS11580_m4 |
AAV28_RS11580_m4 |
cluster_227 |
all |
27 |
30.50 |
350 |
++++GCCCCCGCCGGCCGGGCCGGGG+ |
+CCCCGGCCCGGCCGGCGGGGGC++++ |
|
|
all_m573_AAV28_RS14710_m3 |
AAV28_RS14710_m3 |
cluster_109 |
all |
16 |
10.42 |
92 |
+CTCC-------YCGT |
ACGr-------GGAG+ |
|
|
all_m504_AAV28_RS13565_m4 |
AAV28_RS13565_m4 |
cluster_361 |
all |
16 |
11.09 |
87 |
++AAG-----CGATC+ |
+GATCG-----CTT++ |
|
|
all_m1520_AAV28_RS39745_m5 |
AAV28_RS39745_m5 |
cluster_48 |
all |
19 |
16.64 |
272 |
CTGTG-----AATTCAG++ |
++CTGAATT-----CACAG |
|
|
all_m1554_AAV28_RS42435_m4 |
AAV28_RS42435_m4 |
cluster_192 |
all |
15 |
11.09 |
126 |
++GAAA----TGCT+ |
+AGCA----TTTC++ |
|
|
all_m205_AAV28_RS06855_m5 |
AAV28_RS06855_m5 |
cluster_24 |
all |
33 |
24.56 |
949 |
+++ATTAD-WAATATATTATAAT++++++++++ |
++++++++++ATTATAATATATTw-hTAAT+++ |
|
|
all_m1390_AAV28_RS34355_m5 |
AAV28_RS34355_m5 |
cluster_192 |
all |
15 |
9.70 |
147 |
+++AAAA----GCC+ |
+GGC----TTTT+++ |
|
|
all_m1093_AAV28_RS26085_m3 |
AAV28_RS26085_m3 |
cluster_1 |
all |
26 |
12.48 |
88 |
+++++AATAG-----ATTT+++++++ |
+++++++AAAT-----CTATT+++++ |
|
|
all_m543_AAV28_RS14160_m3 |
AAV28_RS14160_m3 |
cluster_45 |
all |
19 |
10.06 |
461 |
++ATAA--------kATA+ |
+TATM--------TTAT++ |
|
|
all_m224_AAV28_RS07275_m4 |
AAV28_RS07275_m4 |
cluster_98 |
all |
12 |
11.83 |
105 |
++GGTCRAAGC+ |
+GCTTyGACC++ |
|
|
all_m401_AAV28_RS11715_m1 |
AAV28_RS11715_m1 |
cluster_231 |
all |
26 |
18.02 |
212 |
GTCGGC-------------TGGTTCA |
TGAACCA-------------GCCGAC |
|
|
all_m809_AAV28_RS19140_m4 |
AAV28_RS19140_m4 |
cluster_196 |
all |
20 |
14.64 |
289 |
TGGCGY--------AACGC+ |
+GCGTT--------RCGCCA |
|
|
all_m85_AAV28_RS02435_m5 |
AAV28_RS02435_m5 |
cluster_241 |
all |
22 |
29.44 |
757 |
ATTATAWATTATATGATAGAAT |
ATTCTATCATATAATwTATAAT |
|
|
all_m169_AAV28_RS05160_m4 |
AAV28_RS05160_m4 |
cluster_375 |
all |
12 |
13.86 |
96 |
CTACT--GCATG |
CATGC--AGTAG |
|
|
all_m1247_AAV28_RS30740_m2 |
AAV28_RS30740_m2 |
cluster_163 |
all |
20 |
12.51 |
554 |
+GATAG---------wATGG |
CCATW---------CTATC+ |
|
|
all_m1199_AAV28_RS29605_m4 |
AAV28_RS29605_m4 |
cluster_263 |
all |
21 |
16.93 |
230 |
GATCGA-------DATTAAT+ |
+ATTAATh-------TCGATC |
|
|
all_m376_AAV28_RS10485_m1 |
AAV28_RS10485_m1 |
cluster_142 |
all |
25 |
13.65 |
367 |
GCGAAa--------------kCGCC |
GGCGM--------------TTTCGC |
|
|
all_m227_AAV28_RS07350_m2 |
AAV28_RS07350_m2 |
cluster_222 |
all |
17 |
12.15 |
182 |
+AAAGr------rAAGC |
GCTTY------YCTTT+ |
|
|
all_m1232_AAV28_RS30560_m2 |
AAV28_RS30560_m2 |
cluster_31 |
all |
14 |
15.00 |
440 |
+CGGGAK-rCGACA |
TGTCGY-MTCCCG+ |
|
|
all_m817_AAV28_RS19540_m2 |
AAV28_RS19540_m2 |
cluster_177 |
all |
24 |
14.15 |
174 |
CTTGC-------------BTGCGG |
CCGCAv-------------GCAAG |
|
|
all_m1331_AAV28_RS32670_m1 |
AAV28_RS32670_m1 |
cluster_59 |
all |
16 |
13.86 |
309 |
+++TCGTTAACGA+++ |
+++TCGTTAACGA+++ |
|
|
all_m252_AAV28_RS07505_m2 |
AAV28_RS07505_m2 |
cluster_357 |
all |
20 |
20.79 |
244 |
ATTTTCAT-----TGAAAAT |
ATTTTCA-----ATGAAAAT |
|
|
all_m416_AAV28_RS11950_m1 |
AAV28_RS11950_m1 |
cluster_255 |
all |
13 |
14.57 |
350 |
GGAAw--TGGATA |
TATCCA--WTTCC |
|
|
all_m582_AAV28_RS14920_m2 |
AAV28_RS14920_m2 |
cluster_148 |
all |
14 |
16.64 |
350 |
+CGAGCCGGCTCG+ |
+CGAGCCGGCTCG+ |
|
|
all_m1320_AAV28_RS32430_m5 |
AAV28_RS32430_m5 |
cluster_145 |
all |
11 |
12.48 |
192 |
+TCCGAGACC+ |
+GGTCTCGGA+ |
|
|
all_m229_AAV28_RS07350_m4 |
AAV28_RS07350_m4 |
cluster_222 |
all |
17 |
9.70 |
178 |
+CAAG--------AAG+ |
+CTT--------CTTG+ |
|
|
all_m531_AAV28_RS14045_m1 |
AAV28_RS14045_m1 |
cluster_18 |
all |
14 |
15.40 |
233 |
AATCCY--MGAGAT |
ATCTCk--RGGATT |
|
|
all_m835_AAV28_RS20065_m5 |
AAV28_RS20065_m5 |
cluster_301 |
all |
11 |
9.70 |
121 |
++AAG--GAGC |
GCTC--CTT++ |
|
|
all_m1244_AAV28_RS30630_m4 |
AAV28_RS30630_m4 |
cluster_159 |
all |
22 |
11.09 |
57 |
CGTC--------------TAAG |
CTTA--------------GACG |
|
|
all_m1097_AAV28_RS26100_m2 |
AAV28_RS26100_m2 |
cluster_182 |
all |
11 |
13.17 |
181 |
+TAGAwACCAC |
GTGGTWTCTA+ |
|
|
all_m1126_AAV28_RS27990_m1 |
AAV28_RS27990_m1 |
cluster_174 |
all |
17 |
16.64 |
194 |
ACTTCC-----GGGAAG |
CTTCCC-----GGAAGT |
|
|
all_m1178_AAV28_RS29015_m3 |
AAV28_RS29015_m3 |
cluster_133 |
all |
20 |
19.41 |
49 |
GTCCTGG------CCAGGAC |
GTCCTGG------CCAGGAC |
|
|
all_m1176_AAV28_RS29015_m1 |
AAV28_RS29015_m1 |
cluster_329 |
all |
19 |
17.33 |
133 |
+++ACCTm--TAGGGAAA+ |
+TTTCCCTA--KAGGT+++ |
|
|
all_m586_AAV28_RS14965_m1 |
AAV28_RS14965_m1 |
cluster_97 |
all |
10 |
13.86 |
241 |
GGGTTGGACA |
TGTCCAACCC |
|
|
all_m757_AAV28_RS17935_m2 |
AAV28_RS17935_m2 |
cluster_53 |
all |
15 |
20.79 |
165 |
TTTATGTCATAAATG |
CATTTATGACATAAA |
|
|
all_m1203_AAV28_RS29670_m3 |
AAV28_RS29670_m3 |
cluster_183 |
all |
11 |
8.63 |
171 |
CGA----BATT |
AATv----TCG |
|
|
all_m681_AAV28_RS16575_m1 |
AAV28_RS16575_m1 |
cluster_80 |
all |
16 |
13.86 |
131 |
AATATAAATA++++++ |
++++++TATTTATATT |
|
|
all_m387_AAV28_RS11580_m2 |
AAV28_RS11580_m2 |
cluster_164 |
all |
15 |
13.89 |
639 |
CCCCGGs-sGGC+++ |
+++GCCS-SCCGGGG |
|
|
all_m1137_AAV28_RS28315_m2 |
AAV28_RS28315_m2 |
cluster_30 |
all |
17 |
18.75 |
552 |
GAAAATATw--AAAAA+ |
+TTTTT--WATATTTTC |
|
|
all_m1167_AAV28_RS28920_m2 |
AAV28_RS28920_m2 |
cluster_80 |
all |
16 |
11.79 |
543 |
+AAATmAATA++++++ |
++++++TATTKATTT+ |
|
|
all_m863_AAV28_RS20795_m3 |
AAV28_RS20795_m3 |
cluster_8 |
all |
21 |
11.09 |
107 |
+++++++CCCT-CCCC+++++ |
+++++GGGG-AGGG+++++++ |
|
|
all_m1567_AAV28_RS45505_m2 |
AAV28_RS45505_m2 |
cluster_216 |
all |
24 |
13.86 |
175 |
+CGTCG-------------CCGCG |
CGCGG-------------CGACG+ |
|
|
all_m452_AAV28_RS12325_m2 |
AAV28_RS12325_m2 |
cluster_1 |
all |
26 |
11.26 |
729 |
+++++AATT----rATAT++++++++ |
++++++++ATATY----AATT+++++ |
|
|
all_m16_AAV28_RS01355_m1 |
AAV28_RS01355_m1 |
cluster_79 |
all |
28 |
10.19 |
545 |
CTTg------------------GCCA++ |
++TGGC------------------CAAG |
|
|
all_m263_AAV28_RS07770_m3 |
AAV28_RS07770_m3 |
cluster_188 |
all |
10 |
12.48 |
93 |
GAGTTCTGC+ |
+GCAGAACTC |
|
|
all_m98_AAV28_RS02615_m3 |
AAV28_RS02615_m3 |
cluster_14 |
all |
20 |
26.64 |
496 |
ATTCCATTTGvAAATGGAAT |
ATTCCATTTBCAAATGGAAT |
|
|
all_m686_AAV28_RS16595_m1 |
AAV28_RS16595_m1 |
cluster_276 |
all |
11 |
13.86 |
87 |
+TTTGATTTTG |
CAAAATCAAA+ |
|
|
all_m1414_AAV28_RS35710_m4 |
AAV28_RS35710_m4 |
cluster_16 |
all |
23 |
21.58 |
273 |
AGCCTTCR-------CGAAGGCT |
AGCCTTCG-------YGAAGGCT |
|
|
all_m690_AAV28_RS16595_m5 |
AAV28_RS16595_m5 |
cluster_280 |
all |
26 |
12.48 |
78 |
CTGCC-----------------AAAT |
ATTT-----------------GGCAG |
|
|
all_m317_AAV28_RS09240_m2 |
AAV28_RS09240_m2 |
cluster_21 |
all |
13 |
16.64 |
138 |
AAAAGGTTCCCG+ |
+CGGGAACCTTTT |
|
|
all_m1340_AAV28_RS33255_m5 |
AAV28_RS33255_m5 |
cluster_218 |
all |
11 |
12.48 |
88 |
AAGGCTATG++ |
++CATAGCCTT |
|
|
all_m392_AAV28_RS11595_m2 |
AAV28_RS11595_m2 |
cluster_13 |
all |
15 |
20.79 |
193 |
TGACCTCCGAGGTCA |
TGACCTCGGAGGTCA |
|
|
all_m120_AAV28_RS02835_m5 |
AAV28_RS02835_m5 |
cluster_204 |
all |
10 |
8.32 |
280 |
GCG---GAG+ |
+CTC---CGC |
|
|
all_m460_AAV28_RS12655_m5 |
AAV28_RS12655_m5 |
cluster_84 |
all |
19 |
18.02 |
98 |
CCATA------ACGTATGG |
CCATACGT------TATGG |
|
|
all_m881_AAV28_RS21365_m1 |
AAV28_RS21365_m1 |
cluster_4 |
all |
10 |
11.09 |
83 |
+ATGCCAAG+ |
+CTTGGCAT+ |
|
|
all_m524_AAV28_RS13855_m4 |
AAV28_RS13855_m4 |
cluster_14 |
all |
20 |
20.15 |
132 |
++CCCATTr-CCCAAGGA++ |
++TCCTTGGG-YAATGGG++ |
|
|
all_m1523_AAV28_RS40230_m3 |
AAV28_RS40230_m3 |
cluster_325 |
all |
14 |
18.75 |
116 |
ATAGTTGCArCTAT |
ATAGYTGCAACTAT |
|
|
all_m1119_AAV28_RS27630_m4 |
AAV28_RS27630_m4 |
cluster_288 |
all |
12 |
12.48 |
81 |
+TGATGTCTC++ |
++GAGACATCA+ |
|
|
all_m901_AAV28_RS21710_m1 |
AAV28_RS21710_m1 |
cluster_85 |
all |
21 |
16.64 |
161 |
GGTGTGC---------CACAG |
CTGTG---------GCACACC |
|
|
all_m364_AAV28_RS10400_m4 |
AAV28_RS10400_m4 |
cluster_284 |
all |
10 |
12.48 |
107 |
CGCCT-CCGA |
TCGG-AGGCG |
|
|
all_m1469_AAV28_RS36580_m4 |
AAV28_RS36580_m4 |
cluster_276 |
all |
11 |
12.48 |
72 |
+TAAAAACAA+ |
+TTGTTTTTA+ |
|
|
all_m637_AAV28_RS16150_m2 |
AAV28_RS16150_m2 |
cluster_160 |
all |
15 |
16.96 |
306 |
GCTGGW--GACCAGC |
GCTGGTC--wCCAGC |
|
|
all_m468_AAV28_RS12765_m3 |
AAV28_RS12765_m3 |
cluster_52 |
all |
16 |
11.82 |
558 |
++++ATGASGACA+++ |
+++TGTCsTCAT++++ |
|
|
all_m110_AAV28_RS02685_m5 |
AAV28_RS02685_m5 |
cluster_185 |
all |
24 |
33.27 |
350 |
CAAATGCAGATGCATCTGCATTTG |
CAAATGCAGATGCATCTGCATTTG |
|
|
all_m1344_AAV28_RS33285_m4 |
AAV28_RS33285_m4 |
cluster_278 |
all |
18 |
9.70 |
127 |
GTTG----------CTA+ |
+TAG----------CAAC |
|
|
all_m1005_AAV28_RS23660_m5 |
AAV28_RS23660_m5 |
cluster_1 |
all |
26 |
18.02 |
89 |
++++++++TATATACAATATA+++++ |
+++++TATATTGTATATA++++++++ |
|
|
all_m944_AAV28_RS22700_m4 |
AAV28_RS22700_m4 |
cluster_21 |
all |
13 |
18.02 |
205 |
TGGGAATTTTTTT |
AAAAAAATTCCCA |
|
|
all_m211_AAV28_RS06940_m1 |
AAV28_RS06940_m1 |
cluster_354 |
all |
24 |
14.57 |
73 |
CGCCTG-------------sCCAG |
CTGGS-------------CAGGCG |
|
|
all_m465_AAV28_RS12750_m5 |
AAV28_RS12750_m5 |
cluster_178 |
all |
21 |
17.41 |
378 |
AGGTTTC--------RAACCT |
AGGTTY--------GAAACCT |
|
|
all_m114_AAV28_RS02770_m4 |
AAV28_RS02770_m4 |
cluster_180 |
all |
24 |
11.89 |
258 |
+GTCY------------CGGAA++ |
++TTCCG------------RGAC+ |
|
|
all_m139_AAV28_RS03080_m4 |
AAV28_RS03080_m4 |
cluster_155 |
all |
20 |
13.18 |
123 |
+ATCGC------sGCAA+++ |
+++TTGCS------GCGAT+ |
|
|
all_m261_AAV28_RS07770_m1 |
AAV28_RS07770_m1 |
cluster_177 |
all |
24 |
12.77 |
143 |
+++GCGAC----------bTGCC+ |
+GGCAV----------GTCGC+++ |
|
|
all_m800_AAV28_RS18740_m5 |
AAV28_RS18740_m5 |
cluster_162 |
all |
21 |
16.14 |
437 |
GGGGC-------TTTGCCG++ |
++CGGCAAA-------GCCCC |
|
|
all_m722_AAV28_RS17490_m2 |
AAV28_RS17490_m2 |
cluster_298 |
all |
26 |
14.56 |
74 |
++GATCAA-------------RATTG |
CAATy-------------TTGATC++ |
|
|
all_m981_AAV28_RS23240_m1 |
AAV28_RS23240_m1 |
cluster_80 |
all |
16 |
11.11 |
909 |
++TTTAWTTAT+++++ |
+++++ATAAwTAAA++ |
|
|
all_m1171_AAV28_RS28985_m1 |
AAV28_RS28985_m1 |
cluster_147 |
all |
26 |
12.13 |
661 |
CTCCS----------------SGGGG |
CCCCs----------------sGGAG |
|
|
all_m1406_AAV28_RS35690_m1 |
AAV28_RS35690_m1 |
cluster_9 |
all |
32 |
29.11 |
700 |
++++++++ATTAAATATAAWWTATATTTTA++ |
++TAAAATATAwwTTATATTTAAT++++++++ |
|
|
all_m1013_AAV28_RS24325_m3 |
AAV28_RS24325_m3 |
cluster_1 |
all |
26 |
17.66 |
709 |
++++++CATAW-WTATATATC+++++ |
+++++GATATATAw-wTATG++++++ |
|
|
all_m791_AAV28_RS18460_m1 |
AAV28_RS18460_m1 |
cluster_24 |
all |
33 |
37.43 |
273 |
++TAATATAATATATTATATGATATAAGA++++ |
++++TCTTATATCATATAATATATTATATTA++ |
|
|
all_m1104_AAV28_RS26270_m4 |
AAV28_RS26270_m4 |
cluster_263 |
all |
21 |
13.86 |
100 |
++CGATC---------GATGG |
CCATC---------GATCG++ |
|
|
all_m117_AAV28_RS02835_m2 |
AAV28_RS02835_m2 |
cluster_8 |
all |
21 |
19.44 |
451 |
+++++CTCs-yCCCCCAAGAG |
CTCTTGGGGGR-SGAG+++++ |
|
|
all_m57_AAV28_RS02195_m2 |
AAV28_RS02195_m2 |
cluster_33 |
all |
24 |
23.16 |
183 |
++++TATATTTTK-DCAATTTGT+ |
+ACAAATTGh-mAAAATATA++++ |
|
|
all_m258_AAV28_RS07765_m3 |
AAV28_RS07765_m3 |
cluster_267 |
all |
11 |
11.09 |
60 |
+GCGTTGCG++ |
++CGCAACGC+ |
|
|
all_m1404_AAV28_RS35015_m4 |
AAV28_RS35015_m4 |
cluster_86 |
all |
27 |
11.09 |
78 |
+GATT------------------ATCC |
GGAT------------------AATC+ |
|
|
all_m1194_AAV28_RS29365_m4 |
AAV28_RS29365_m4 |
cluster_147 |
all |
26 |
11.09 |
153 |
CGAA------------------GGAG |
CTCC------------------TTCG |
|
|
all_m273_AAV28_RS08060_m3 |
AAV28_RS08060_m3 |
cluster_243 |
all |
12 |
16.64 |
111 |
TGATAGTTACAA |
TTGTAACTATCA |
|
|
all_m1528_AAV28_RS40400_m3 |
AAV28_RS40400_m3 |
cluster_241 |
all |
22 |
15.95 |
506 |
+++++CTAWTATATTAG+++++ |
+++++CTAATATAwTAG+++++ |
|
|
all_m557_AAV28_RS14300_m2 |
AAV28_RS14300_m2 |
cluster_303 |
all |
20 |
25.31 |
277 |
GAGAAGAvkTGGCGGAGAGG |
CCTCTCCGCCAMBTCTTCTC |
|
|
all_m1564_AAV28_RS45430_m4 |
AAV28_RS45430_m4 |
cluster_11 |
all |
16 |
18.31 |
1050 |
AATTGTHTTTTTGT++ |
++ACAAAAAdACAATT |
|
|
all_m1394_AAV28_RS34825_m4 |
AAV28_RS34825_m4 |
cluster_189 |
all |
12 |
8.32 |
54 |
+++AGG-AGA++ |
++TCT-CCT+++ |
|
|
all_m1466_AAV28_RS36580_m1 |
AAV28_RS36580_m1 |
cluster_170 |
all |
11 |
15.25 |
235 |
CGACAAACGAC |
GTCGTTTGTCG |
|
|
all_m1379_AAV28_RS33965_m4 |
AAV28_RS33965_m4 |
cluster_170 |
all |
11 |
12.48 |
100 |
GTCG--TGTGG |
CCACA--CGAC |
|
|
all_m275_AAV28_RS08060_m5 |
AAV28_RS08060_m5 |
cluster_61 |
all |
11 |
13.86 |
93 |
ATTACTAATT+ |
+AATTAGTAAT |
|
|
all_m998_AAV28_RS23535_m3 |
AAV28_RS23535_m3 |
cluster_38 |
all |
13 |
15.25 |
148 |
++AGCGAAGCATC |
GATGCTTCGCT++ |
|
|
all_m613_AAV28_RS15810_m3 |
AAV28_RS15810_m3 |
cluster_355 |
all |
11 |
10.04 |
279 |
GCCw---AACA |
TGTT---WGGC |
|
|
all_m764_AAV28_RS18030_m4 |
AAV28_RS18030_m4 |
cluster_74 |
all |
15 |
16.93 |
384 |
+TATATCCT-dTAAA |
TTTAH-AGGATATA+ |
|
|
all_m96_AAV28_RS02615_m1 |
AAV28_RS02615_m1 |
cluster_14 |
all |
20 |
17.24 |
533 |
ATTCCATTb-vAAAA+++++ |
+++++TTTTB-VAATGGAAT |
|
|
all_m629_AAV28_RS15910_m4 |
AAV28_RS15910_m4 |
cluster_52 |
all |
16 |
13.86 |
177 |
+++CATGACGGCA+++ |
+++TGCCGTCATG+++ |
|
|
all_m330_AAV28_RS09520_m5 |
AAV28_RS09520_m5 |
cluster_232 |
all |
12 |
9.70 |
153 |
+GAACTAT++++ |
++++ATAGTTC+ |
|
|
all_m1372_AAV28_RS33845_m2 |
AAV28_RS33845_m2 |
cluster_119 |
all |
20 |
27.73 |
119 |
ATGCAACCATTTGGTTGCAT |
ATGCAACCAAATGGTTGCAT |
|
|
all_m882_AAV28_RS21365_m2 |
AAV28_RS21365_m2 |
cluster_12 |
all |
14 |
11.09 |
66 |
+++TATATTTT+++ |
+++AAAATATA+++ |
|
|
all_m1552_AAV28_RS42435_m2 |
AAV28_RS42435_m2 |
cluster_156 |
all |
19 |
19.05 |
247 |
+CTTCAAr---sGTGCCAG |
CTGGCACS---YTTGAAG+ |
|
|
all_m1285_AAV28_RS31565_m5 |
AAV28_RS31565_m5 |
cluster_63 |
all |
15 |
20.79 |
115 |
TGTTCCTCCCCCTCG |
CGAGGGGGAGGAACA |
|
|
all_m1498_AAV28_RS38785_m3 |
AAV28_RS38785_m3 |
cluster_337 |
all |
22 |
8.32 |
69 |
++TCG---------GTG+++++ |
+++++CAC---------CGA++ |
|
|
all_m260_AAV28_RS07765_m5 |
AAV28_RS07765_m5 |
cluster_151 |
all |
27 |
9.70 |
39 |
CACA-------------------TAC+ |
+GTA-------------------TGTG |
|
|
all_m821_AAV28_RS19565_m1 |
AAV28_RS19565_m1 |
cluster_148 |
all |
14 |
19.41 |
155 |
GAGAGCGCGCTCTA |
TAGAGCGCGCTCTC |
|
|
all_m1425_AAV28_RS36020_m5 |
AAV28_RS36020_m5 |
cluster_37 |
all |
27 |
13.28 |
480 |
+CAAY----------------AGTTCC |
GGAACT----------------RTTG+ |
|
|
all_m1277_AAV28_RS31495_m2 |
AAV28_RS31495_m2 |
cluster_12 |
all |
14 |
13.86 |
239 |
++AATTATAATT++ |
++AATTATAATT++ |
|
|
all_m616_AAV28_RS15830_m1 |
AAV28_RS15830_m1 |
cluster_164 |
all |
15 |
13.17 |
700 |
++GCCGC-sGGCG++ |
++CGCCS-GCGGC++ |
|
|
all_m238_AAV28_RS07400_m3 |
AAV28_RS07400_m3 |
cluster_29 |
all |
28 |
12.48 |
350 |
CGCCC-----------------GCGC++ |
++GCGC-----------------GGGCG |
|
|
all_m780_AAV28_RS18325_m5 |
AAV28_RS18325_m5 |
cluster_107 |
all |
17 |
16.65 |
1163 |
TGCCGCCGCsGGA++++ |
++++TCCSGCGGCGGCA |
|
|
all_m1228_AAV28_RS30470_m3 |
AAV28_RS30470_m3 |
cluster_98 |
all |
12 |
16.64 |
350 |
TTCGATCAAGCG |
CGCTTGATCGAA |
|
|
all_m577_AAV28_RS14840_m2 |
AAV28_RS14840_m2 |
cluster_108 |
all |
14 |
16.64 |
203 |
+TTTCCTCCCCCA+ |
+TGGGGGAGGAAA+ |
|
|
all_m410_AAV28_RS11845_m5 |
AAV28_RS11845_m5 |
cluster_67 |
all |
12 |
8.32 |
350 |
+AAA--ACA+++ |
+++TGT--TTT+ |
|
|
all_m1326_AAV28_RS32510_m1 |
AAV28_RS32510_m1 |
cluster_67 |
all |
12 |
15.25 |
132 |
AAAATTGCAAA+ |
+TTTGCAATTTT |
|
|
all_m1458_AAV28_RS36350_m3 |
AAV28_RS36350_m3 |
cluster_26 |
all |
21 |
18.02 |
156 |
ACCTG--------TGTCAGGT |
ACCTGACA--------CAGGT |
|
|
all_m118_AAV28_RS02835_m3 |
AAV28_RS02835_m3 |
cluster_8 |
all |
21 |
22.48 |
868 |
++++CCCCTCbCCCCCAAGAG |
CTCTTGGGGGVGAGGGG++++ |
|
|
all_m1022_AAV28_RS24520_m2 |
AAV28_RS24520_m2 |
cluster_279 |
all |
27 |
13.20 |
100 |
GCTCY-----------------TTTTT |
AAAAA-----------------rGAGC |
|
|
all_m204_AAV28_RS06855_m4 |
AAV28_RS06855_m4 |
cluster_1 |
all |
26 |
26.64 |
949 |
+++TAATATAdATAATATTTAAA+++ |
+++TTTAAATATTATHTATATTA+++ |
|
|
all_m63_AAV28_RS02210_m3 |
AAV28_RS02210_m3 |
cluster_216 |
all |
24 |
14.68 |
414 |
GCGCCS-------------GCGCG |
CGCGC-------------SGGCGC |
|
|
all_m87_AAV28_RS02450_m2 |
AAV28_RS02450_m2 |
cluster_42 |
all |
30 |
29.11 |
159 |
+++++++++AATTTTGAGGGGCGCAAAATT |
AATTTTGCGCCCCTCAAAATT+++++++++ |
|
|
all_m728_AAV28_RS17635_m3 |
AAV28_RS17635_m3 |
cluster_130 |
all |
18 |
22.18 |
137 |
TCAGTATGCT-ATCATA+ |
+TATGAT-AGCATACTGA |
|
|
all_m1242_AAV28_RS30630_m2 |
AAV28_RS30630_m2 |
cluster_12 |
all |
14 |
11.81 |
86 |
+++++CATAwAACT |
AGTTWTATG+++++ |
|
|
all_m99_AAV28_RS02615_m4 |
AAV28_RS02615_m4 |
cluster_201 |
all |
20 |
12.48 |
141 |
+++CCCCT------AGGG++ |
++CCCT------AGGGG+++ |
|
|
all_m918_AAV28_RS22250_m3 |
AAV28_RS22250_m3 |
cluster_245 |
all |
19 |
14.57 |
379 |
AATTCT--------RAATT |
AATTy--------AGAATT |
|
|
all_m1375_AAV28_RS33845_m5 |
AAV28_RS33845_m5 |
cluster_321 |
all |
21 |
9.70 |
56 |
AACC--------------CAA |
TTG--------------GGTT |
|
|
all_m1111_AAV28_RS27295_m1 |
AAV28_RS27295_m1 |
cluster_19 |
all |
17 |
13.86 |
350 |
++++++CGCGCCAGCG+ |
+CGCTGGCGCG++++++ |
|
|
all_m123_AAV28_RS02840_m3 |
AAV28_RS02840_m3 |
cluster_154 |
all |
21 |
21.58 |
185 |
ACCCGTT-----KTGTGAGAA |
TTCTCACAM-----AACGGGT |
|
|
all_m413_AAV28_RS11895_m3 |
AAV28_RS11895_m3 |
cluster_24 |
all |
33 |
28.44 |
572 |
+++++TATAATATATTATWTATTTTA+++++++ |
+++++++TAAAATAwATAATATATTATA+++++ |
|
|
all_m165_AAV28_RS04825_m5 |
AAV28_RS04825_m5 |
cluster_20 |
all |
9 |
12.48 |
187 |
TATCTGAAA |
TTTCAGATA |
|
|
all_m1488_AAV28_RS38235_m3 |
AAV28_RS38235_m3 |
cluster_260 |
all |
14 |
13.86 |
61 |
+CAAA---GGTAAA |
TTTACC---TTTG+ |
|
|
all_m511_AAV28_RS13725_m1 |
AAV28_RS13725_m1 |
cluster_125 |
all |
14 |
14.28 |
647 |
+ATTTCvgAAAAT+ |
+ATTTTCBGAAAT+ |
|
|
all_m1125_AAV28_RS27825_m5 |
AAV28_RS27825_m5 |
cluster_1 |
all |
26 |
15.25 |
102 |
++++++ATTAT-----ATATGG++++ |
++++CCATAT-----ATAAT++++++ |
|
|
all_m228_AAV28_RS07350_m3 |
AAV28_RS07350_m3 |
cluster_316 |
all |
15 |
9.70 |
69 |
AACG--------GCC |
GGC--------CGTT |
|
|
all_m77_AAV28_RS02325_m2 |
AAV28_RS02325_m2 |
cluster_204 |
all |
10 |
12.48 |
228 |
+GGAAGGAGC |
GCTCCTTCC+ |
|
|
all_m650_AAV28_RS16270_m5 |
AAV28_RS16270_m5 |
cluster_92 |
all |
10 |
12.48 |
189 |
TCGAACAGA+ |
+TCTGTTCGA |
|
|
all_m325_AAV28_RS09370_m5 |
AAV28_RS09370_m5 |
cluster_61 |
all |
11 |
10.43 |
460 |
GAAWATTT+++ |
+++AAATwTTC |
|
|
all_m542_AAV28_RS14160_m2 |
AAV28_RS14160_m2 |
cluster_120 |
all |
15 |
13.88 |
313 |
+++AAATm-wTATTT |
AAATAW-KATTT+++ |
|
|
all_m122_AAV28_RS02840_m2 |
AAV28_RS02840_m2 |
cluster_154 |
all |
21 |
15.25 |
104 |
+CCCGTT---------GAGAA |
TTCTC---------AACGGG+ |
|
|
all_m1522_AAV28_RS40230_m2 |
AAV28_RS40230_m2 |
cluster_66 |
all |
11 |
12.48 |
123 |
+GGGACGGCT+ |
+AGCCGTCCC+ |
|
|
all_m675_AAV28_RS16520_m5 |
AAV28_RS16520_m5 |
cluster_80 |
all |
16 |
11.09 |
66 |
++TTTAGATA++++++ |
++++++TATCTAAA++ |
|
|
all_m779_AAV28_RS18325_m4 |
AAV28_RS18325_m4 |
cluster_140 |
all |
16 |
13.93 |
1098 |
+GCGGCR--SGCGGC+ |
+GCCGCs--yGCCGC+ |
|
|
all_m1533_AAV28_RS40420_m3 |
AAV28_RS40420_m3 |
cluster_158 |
all |
12 |
12.48 |
108 |
+TTTGG--TTCG |
CGAA--CCAAA+ |
|
|
all_m1255_AAV28_RS31045_m5 |
AAV28_RS31045_m5 |
cluster_176 |
all |
28 |
10.41 |
110 |
CAAW------------------ATAT++ |
++ATAT------------------wTTG |
|
|
all_m154_AAV28_RS03590_m4 |
AAV28_RS03590_m4 |
cluster_103 |
all |
18 |
9.70 |
230 |
++++CGC-----TGCA++ |
++TGCA-----GCG++++ |
|
|
all_m889_AAV28_RS21410_m4 |
AAV28_RS21410_m4 |
cluster_43 |
all |
29 |
18.02 |
100 |
TGAAACC---------------GCGAAT+ |
+ATTCGC---------------GGTTTCA |
|
|
all_m1063_AAV28_RS25280_m3 |
AAV28_RS25280_m3 |
cluster_10 |
all |
21 |
21.56 |
859 |
TGGTTAAS----SGTTAACCA |
TGGTTAACs----sTTAACCA |
|
|
all_m806_AAV28_RS19140_m1 |
AAV28_RS19140_m1 |
cluster_3 |
all |
16 |
14.69 |
350 |
++++CCCGGA-TCCAT |
ATGGA-TCCGGG++++ |
|
|
all_m665_AAV28_RS16470_m5 |
AAV28_RS16470_m5 |
cluster_103 |
all |
18 |
12.08 |
261 |
CGCGCs------bGCG++ |
++CGCV------SGCGCG |
|
|
all_m699_AAV28_RS16665_m4 |
AAV28_RS16665_m4 |
cluster_34 |
all |
23 |
26.34 |
350 |
GACTGAACGATCGATCGCT++++ |
++++AGCGATCGATCGTTCAGTC |
|
|
all_m907_AAV28_RS21875_m2 |
AAV28_RS21875_m2 |
cluster_229 |
all |
13 |
14.57 |
432 |
TTCAAY-SCTTAT |
ATAAGs-rTTGAA |
|
|
all_m83_AAV28_RS02435_m3 |
AAV28_RS02435_m3 |
cluster_241 |
all |
22 |
24.95 |
350 |
++ATTCTATTATATTAGAAT++ |
++ATTCTAATATAATAGAAT++ |
|
|
all_m279_AAV28_RS08065_m4 |
AAV28_RS08065_m4 |
cluster_132 |
all |
18 |
13.18 |
59 |
CGAGAA-------yCCC+ |
+GGGR-------TTCTCG |
|
|
all_m1432_AAV28_RS36105_m2 |
AAV28_RS36105_m2 |
cluster_88 |
all |
11 |
12.48 |
64 |
CTGTCACAT++ |
++ATGTGACAG |
|
|
all_m306_AAV28_RS08955_m1 |
AAV28_RS08955_m1 |
cluster_1 |
all |
26 |
19.11 |
755 |
++++AATATATW--WTATATT+++++ |
+++++AATATAW--wATATATT++++ |
|
|
all_m1298_AAV28_RS32005_m3 |
AAV28_RS32005_m3 |
cluster_167 |
all |
24 |
18.02 |
195 |
CGGCGCG---------ACAGGA++ |
++TCCTGT---------CGCGCCG |
|
|
all_m341_AAV28_RS09975_m1 |
AAV28_RS09975_m1 |
cluster_157 |
all |
18 |
11.70 |
235 |
+GCAAd-------dTCAA |
TTGAH-------HTTGC+ |
|
|
all_m550_AAV28_RS14175_m5 |
AAV28_RS14175_m5 |
cluster_19 |
all |
17 |
19.41 |
49 |
TCGCGCCGCCCCAC+++ |
+++GTGGGGCGGCGCGA |
|
|
all_m501_AAV28_RS13565_m1 |
AAV28_RS13565_m1 |
cluster_224 |
all |
13 |
15.25 |
235 |
TTTATCTTGAC++ |
++GTCAAGATAAA |
|
|
all_m590_AAV28_RS14965_m5 |
AAV28_RS14965_m5 |
cluster_97 |
all |
10 |
13.86 |
241 |
GGGTTGGAGA |
TCTCCAACCC |
|
|
all_m1030_AAV28_RS24585_m5 |
AAV28_RS24585_m5 |
cluster_238 |
all |
17 |
9.03 |
125 |
GAA---------WACG+ |
+CGTw---------TTC |
|
|
all_m633_AAV28_RS16085_m3 |
AAV28_RS16085_m3 |
cluster_70 |
all |
14 |
18.34 |
353 |
GCAGCGCTGsCAAG |
CTTGSCAGCGCTGC |
|
|
all_m400_AAV28_RS11695_m5 |
AAV28_RS11695_m5 |
cluster_22 |
all |
18 |
11.84 |
521 |
++TGACR-----GTGA++ |
++TCAC-----yGTCA++ |
|
|
all_m385_AAV28_RS11120_m5 |
AAV28_RS11120_m5 |
cluster_1 |
all |
26 |
8.32 |
260 |
++++++ATT------TAT++++++++ |
++++++++ATA------AAT++++++ |
|
|
all_m1274_AAV28_RS31420_m4 |
AAV28_RS31420_m4 |
cluster_155 |
all |
20 |
15.96 |
177 |
CTGTk--------GCAACAG |
CTGTTGC--------MACAG |
|
|
all_m1140_AAV28_RS28315_m5 |
AAV28_RS28315_m5 |
cluster_1 |
all |
26 |
9.04 |
480 |
++++++ATTy----ATA+++++++++ |
+++++++++TAT----RAAT++++++ |
|
|
all_m430_AAV28_RS11970_m5 |
AAV28_RS11970_m5 |
cluster_217 |
all |
21 |
26.34 |
350 |
GAAATATATTTTCGAAATT++ |
++AATTTCGAAAATATATTTC |
|
|
all_m510_AAV28_RS13620_m5 |
AAV28_RS13620_m5 |
cluster_81 |
all |
23 |
9.70 |
113 |
++TATA-----------ATT+++ |
+++AAT-----------TATA++ |
|
|
all_m60_AAV28_RS02195_m5 |
AAV28_RS02195_m5 |
cluster_268 |
all |
13 |
9.70 |
75 |
GCGA----TGA++ |
++TCA----TCGC |
|
|
all_m1010_AAV28_RS24040_m5 |
AAV28_RS24040_m5 |
cluster_89 |
all |
11 |
13.86 |
162 |
AAAATTATTG+ |
+CAATAATTTT |
|
|
all_m360_AAV28_RS10315_m5 |
AAV28_RS10315_m5 |
cluster_96 |
all |
10 |
13.86 |
180 |
ATCAAGGCCC |
GGGCCTTGAT |
|
|
all_m559_AAV28_RS14300_m4 |
AAV28_RS14300_m4 |
cluster_331 |
all |
8 |
9.70 |
85 |
TCC-TACA |
TGTA-GGA |
|
|
all_m106_AAV28_RS02685_m1 |
AAV28_RS02685_m1 |
cluster_185 |
all |
24 |
14.17 |
463 |
++GATGCA---GCATC++++++++ |
++++++++GATGC---TGCATC++ |
|
|
all_m1299_AAV28_RS32005_m4 |
AAV28_RS32005_m4 |
cluster_109 |
all |
16 |
16.64 |
142 |
TCTCCT----GTCTGT |
ACAGAC----AGGAGA |
|
|
all_m1234_AAV28_RS30560_m4 |
AAV28_RS30560_m4 |
cluster_93 |
all |
11 |
11.39 |
355 |
+AGAGMGCGA+ |
+TCGCKCTCT+ |
|
|
all_m478_AAV28_RS13025_m3 |
AAV28_RS13025_m3 |
cluster_345 |
all |
25 |
15.28 |
142 |
AAAAGm-------------sGCAAA |
TTTGCS-------------KCTTTT |
|
|
all_m375_AAV28_RS10455_m5 |
AAV28_RS10455_m5 |
cluster_208 |
all |
11 |
11.43 |
157 |
++TTACYACCT |
AGGTrGTAA++ |
|
|
all_m1042_AAV28_RS25035_m2 |
AAV28_RS25035_m2 |
cluster_40 |
all |
20 |
22.18 |
350 |
CTGCCTGC----TTGCAGGC |
GCCTGCAA----GCAGGCAG |
|
|
all_m786_AAV28_RS18390_m1 |
AAV28_RS18390_m1 |
cluster_65 |
all |
15 |
13.51 |
115 |
TTGTH----RCATTT |
AAATGy----dACAA |
|
|
all_m778_AAV28_RS18325_m3 |
AAV28_RS18325_m3 |
cluster_107 |
all |
17 |
18.02 |
350 |
TGCCGCCGCGGCA++++ |
++++TGCCGCGGCGGCA |
|
|
all_m642_AAV28_RS16200_m2 |
AAV28_RS16200_m2 |
cluster_299 |
all |
15 |
17.34 |
352 |
GCGGAAW--AATTTC |
GAAATT--wTTCCGC |
|
|
all_m1363_AAV28_RS33760_m3 |
AAV28_RS33760_m3 |
cluster_257 |
all |
26 |
16.24 |
85 |
AACTGTW-------------VAATCC |
GGATTb-------------wACAGTT |
|
|
all_m284_AAV28_RS08105_m4 |
AAV28_RS08105_m4 |
cluster_252 |
all |
15 |
16.65 |
108 |
CAATGACS--YAGTT |
AACTr--sGTCATTG |
|
|
all_m414_AAV28_RS11895_m4 |
AAV28_RS11895_m4 |
cluster_45 |
all |
19 |
9.70 |
311 |
+++TATA-------TAT++ |
++ATA-------TATA+++ |
|
|
all_m1472_AAV28_RS36930_m2 |
AAV28_RS36930_m2 |
cluster_250 |
all |
25 |
9.70 |
139 |
+++ATG--------------ACAA+ |
+TTGT--------------CAT+++ |
|
|
all_m76_AAV28_RS02325_m1 |
AAV28_RS02325_m1 |
cluster_114 |
all |
10 |
12.88 |
353 |
AGCGAcGACG |
CGTCGTCGCT |
|
|
all_m697_AAV28_RS16665_m2 |
AAV28_RS16665_m2 |
cluster_4 |
all |
10 |
9.70 |
257 |
+++GTCAAGC |
GCTTGAC+++ |
|
|
all_m257_AAV28_RS07765_m2 |
AAV28_RS07765_m2 |
cluster_151 |
all |
27 |
10.40 |
67 |
+ACAG------------------wACC |
GGTW------------------CTGT+ |
|
|
all_m194_AAV28_RS06460_m4 |
AAV28_RS06460_m4 |
cluster_117 |
all |
8 |
9.10 |
492 |
+ATAYGCA |
TGCRTAT+ |
|
|
all_m445_AAV28_RS12170_m5 |
AAV28_RS12170_m5 |
cluster_235 |
all |
18 |
9.70 |
350 |
+++++GCCG-----GGG+ |
+CCC-----CGGC+++++ |
|
|
all_m1502_AAV28_RS39075_m2 |
AAV28_RS39075_m2 |
cluster_268 |
all |
13 |
13.22 |
219 |
+CGAAw--TGAAA |
TTTCA--WTTCG+ |
|
|
all_m539_AAV28_RS14135_m4 |
AAV28_RS14135_m4 |
cluster_71 |
all |
19 |
9.70 |
350 |
++++ACGG------CCG++ |
++CGG------CCGT++++ |
|
|
all_m454_AAV28_RS12325_m4 |
AAV28_RS12325_m4 |
cluster_190 |
all |
27 |
9.71 |
133 |
+CTCs------------------kCCA |
TGGM------------------SGAG+ |
|
|
all_m1168_AAV28_RS28920_m3 |
AAV28_RS28920_m3 |
cluster_1 |
all |
26 |
22.88 |
641 |
+++++AAATATAw-TAATATTTT+++ |
+++AAAATATTA-WTATATTT+++++ |
|
|
all_m190_AAV28_RS06245_m5 |
AAV28_RS06245_m5 |
cluster_321 |
all |
21 |
9.70 |
61 |
++CCGA------------CTA |
TAG------------TCGG++ |
|
|
all_m68_AAV28_RS02220_m3 |
AAV28_RS02220_m3 |
cluster_220 |
all |
11 |
11.09 |
184 |
+++GCTTCTTG |
CAAGAAGC+++ |
|
|
all_m1192_AAV28_RS29365_m2 |
AAV28_RS29365_m2 |
cluster_161 |
all |
20 |
12.48 |
203 |
+CCCG---------GATTC+ |
+GAATC---------CGGG+ |
|
|
all_m1457_AAV28_RS36350_m2 |
AAV28_RS36350_m2 |
cluster_193 |
all |
11 |
15.25 |
150 |
ACCTGACAGGT |
ACCTGTCAGGT |
|
|
all_m509_AAV28_RS13620_m4 |
AAV28_RS13620_m4 |
cluster_186 |
all |
21 |
26.34 |
167 |
CGATATAAATTATATCGGA++ |
++TCCGATATAATTTATATCG |
|
|
all_m320_AAV28_RS09240_m5 |
AAV28_RS09240_m5 |
cluster_106 |
all |
30 |
12.82 |
257 |
++GGACG-----------------wTCCC+ |
+GGGAW-----------------CGTCC++ |
|
|
all_m1208_AAV28_RS29730_m3 |
AAV28_RS29730_m3 |
cluster_104 |
all |
18 |
12.48 |
350 |
CTCTC-------GAGG++ |
++CCTC-------GAGAG |
|
|
all_m329_AAV28_RS09520_m4 |
AAV28_RS09520_m4 |
cluster_1 |
all |
26 |
11.09 |
159 |
++++++ATAT----TAAT++++++++ |
++++++++ATTA----ATAT++++++ |
|
|
all_m134_AAV28_RS03045_m4 |
AAV28_RS03045_m4 |
cluster_173 |
all |
14 |
18.02 |
350 |
+CAATCTCCGCGCA |
TGCGCGGAGATTG+ |
|
|
all_m938_AAV28_RS22405_m3 |
AAV28_RS22405_m3 |
cluster_67 |
all |
12 |
11.09 |
350 |
+GAAA--AAAA+ |
+TTTT--TTTC+ |
|
|
all_m237_AAV28_RS07400_m2 |
AAV28_RS07400_m2 |
cluster_8 |
all |
21 |
19.41 |
350 |
+++CCCCCCCCGCGCCC++++ |
++++GGGCGCGGGGGGGG+++ |
|
|
all_m902_AAV28_RS21710_m2 |
AAV28_RS21710_m2 |
cluster_85 |
all |
21 |
15.25 |
151 |
+GTGTGT---------CGCAG |
CTGCG---------ACACAC+ |
|
|
all_m17_AAV28_RS01355_m2 |
AAV28_RS01355_m2 |
cluster_79 |
all |
28 |
13.91 |
557 |
CTTGR----------------YGCCAT+ |
+ATGGCr----------------yCAAG |
|
|
all_m898_AAV28_RS21665_m3 |
AAV28_RS21665_m3 |
cluster_12 |
all |
14 |
10.44 |
465 |
++++ATAwATCA++ |
++TGATWTAT++++ |
|
|
all_m1041_AAV28_RS25035_m1 |
AAV28_RS25035_m1 |
cluster_40 |
all |
20 |
13.99 |
529 |
CTGCM-------MGGCAG++ |
++CTGCCk-------KGCAG |
|
|
all_m1054_AAV28_RS25150_m4 |
AAV28_RS25150_m4 |
cluster_61 |
all |
11 |
11.79 |
214 |
+ATTSATTAA+ |
+TTAATsAAT+ |
|
|
all_m1364_AAV28_RS33760_m4 |
AAV28_RS33760_m4 |
cluster_37 |
all |
27 |
11.09 |
47 |
+AAAC------------------TTCC |
GGAA------------------GTTT+ |
|
|
all_m1105_AAV28_RS26270_m5 |
AAV28_RS26270_m5 |
cluster_82 |
all |
22 |
18.02 |
219 |
CCGCCCC---------GAGGAG |
CTCCTC---------GGGGCGG |
|
|
all_m750_AAV28_RS17810_m5 |
AAV28_RS17810_m5 |
cluster_10 |
all |
21 |
11.09 |
78 |
+++TATAC------TTA++++ |
++++TAA------GTATA+++ |
|
|
all_m498_AAV28_RS13495_m3 |
AAV28_RS13495_m3 |
cluster_130 |
all |
18 |
11.86 |
228 |
++++ACATR-GTAT++++ |
++++ATAC-YATGT++++ |
|
|
all_m641_AAV28_RS16200_m1 |
AAV28_RS16200_m1 |
cluster_102 |
all |
23 |
24.95 |
255 |
+++++GAAGTGAAATTCCACTTC |
GAAGTGGAATTTCACTTC+++++ |
|
|
all_m1012_AAV28_RS24325_m2 |
AAV28_RS24325_m2 |
cluster_1 |
all |
26 |
11.12 |
1023 |
++++++++CATw---TATAT++++++ |
++++++ATATA---WATG++++++++ |
|
|
all_m84_AAV28_RS02435_m4 |
AAV28_RS02435_m4 |
cluster_241 |
all |
22 |
27.73 |
350 |
++ATTCTATTATATGATAGAAT |
ATTCTATCATATAATAGAAT++ |
|
|
all_m1381_AAV28_RS34190_m1 |
AAV28_RS34190_m1 |
cluster_78 |
all |
20 |
13.89 |
105 |
+CGCAR--------YTCTGC |
GCAGAr--------yTGCG+ |
|
|
all_m754_AAV28_RS17915_m4 |
AAV28_RS17915_m4 |
cluster_114 |
all |
10 |
12.48 |
88 |
+GCAACTACG |
CGTAGTTGC+ |
|
|
all_m1487_AAV28_RS38235_m2 |
AAV28_RS38235_m2 |
cluster_260 |
all |
14 |
14.64 |
150 |
TCTAGC---WTTGC |
GCAAW---GCTAGA |
|
|
all_m646_AAV28_RS16270_m1 |
AAV28_RS16270_m1 |
cluster_171 |
all |
13 |
16.64 |
189 |
+TTTTTGAACAGA |
TCTGTTCAAAAA+ |
|
|
all_m450_AAV28_RS12315_m5 |
AAV28_RS12315_m5 |
cluster_270 |
all |
18 |
8.32 |
82 |
CCA-----------GTC+ |
+GAC-----------TGG |
|
|
all_m48_AAV28_RS02075_m3 |
AAV28_RS02075_m3 |
cluster_19 |
all |
17 |
15.25 |
150 |
++++++CGCGCCGTGGC |
GCCACGGCGCG++++++ |
|
|
all_m1103_AAV28_RS26270_m3 |
AAV28_RS26270_m3 |
cluster_82 |
all |
22 |
16.64 |
219 |
CCGCCCC----------TGGAG |
CTCCA----------GGGGCGG |
|
|
all_m395_AAV28_RS11595_m5 |
AAV28_RS11595_m5 |
cluster_10 |
all |
21 |
12.48 |
104 |
+++TTACC------GTAA+++ |
+++TTAC------GGTAA+++ |
|
|
all_m1547_AAV28_RS41560_m2 |
AAV28_RS41560_m2 |
cluster_76 |
all |
12 |
16.64 |
161 |
CACATAAGCACA |
TGTGCTTATGTG |
|
|
all_m834_AAV28_RS20065_m4 |
AAV28_RS20065_m4 |
cluster_8 |
all |
21 |
18.36 |
140 |
++++AAGGGRGGGGGAGG+++ |
+++CCTCCCCCyCCCTT++++ |
|
|
all_m1024_AAV28_RS24520_m4 |
AAV28_RS24520_m4 |
cluster_198 |
all |
24 |
11.80 |
88 |
+AAAA-----------rGTTC+++ |
+++GAACY-----------TTTT+ |
|
|
all_m1245_AAV28_RS30630_m5 |
AAV28_RS30630_m5 |
cluster_159 |
all |
22 |
9.70 |
46 |
+TCA-------------TGAC+ |
+GTCA-------------TGA+ |
|
|
all_m391_AAV28_RS11595_m1 |
AAV28_RS11595_m1 |
cluster_13 |
all |
15 |
19.57 |
289 |
TGACCTCsGAGGTCA |
TGACCTCSGAGGTCA |
|
|
all_m79_AAV28_RS02325_m4 |
AAV28_RS02325_m4 |
cluster_114 |
all |
10 |
13.86 |
295 |
CGTCGTCGTC |
GACGACGACG |
|
|
all_m893_AAV28_RS21550_m3 |
AAV28_RS21550_m3 |
cluster_118 |
all |
28 |
13.86 |
98 |
TTGGC------------------GCCAA |
TTGGC------------------GCCAA |
|
|
all_m1145_AAV28_RS28385_m5 |
AAV28_RS28385_m5 |
cluster_176 |
all |
28 |
16.64 |
70 |
GGATAT----------------ATATCC |
GGATAT----------------ATATCC |
|
|
all_m982_AAV28_RS23240_m2 |
AAV28_RS23240_m2 |
cluster_61 |
all |
11 |
11.78 |
400 |
TTAA-WAATT+ |
+AATTw-TTAA |
|
|
all_m471_AAV28_RS12970_m1 |
AAV28_RS12970_m1 |
cluster_211 |
all |
9 |
12.48 |
350 |
CGCGCAAAT |
ATTTGCGCG |
|
|
all_m1517_AAV28_RS39745_m2 |
AAV28_RS39745_m2 |
cluster_48 |
all |
19 |
19.45 |
289 |
CTGTGAW----WTTCACAG |
CTGTGAAw----wTCACAG |
|
|
all_m970_AAV28_RS23100_m5 |
AAV28_RS23100_m5 |
cluster_12 |
all |
14 |
13.86 |
99 |
++TGAAAT-TCAG+ |
+CTGA-ATTTCA++ |
|
|
all_m1212_AAV28_RS29810_m2 |
AAV28_RS29810_m2 |
cluster_249 |
all |
26 |
20.79 |
350 |
+CATATAAATAAATAT++++++++++ |
++++++++++ATATTTATTTATATG+ |
|
|
all_m576_AAV28_RS14840_m1 |
AAV28_RS14840_m1 |
cluster_295 |
all |
18 |
14.56 |
247 |
CCGGCG-------rGGAG |
CTCCY-------CGCCGG |
|
|
all_m555_AAV28_RS14265_m5 |
AAV28_RS14265_m5 |
cluster_1 |
all |
26 |
26.34 |
1367 |
+++TATTATAThAAATATATTAT+++ |
+++ATAATATATTTDATATAATA+++ |
|
|
all_m712_AAV28_RS17195_m2 |
AAV28_RS17195_m2 |
cluster_150 |
all |
21 |
12.87 |
460 |
+++AGAAM------KTTTTT+ |
+AAAAAm------kTTCT+++ |
|
|
all_m393_AAV28_RS11595_m3 |
AAV28_RS11595_m3 |
cluster_13 |
all |
15 |
20.79 |
193 |
TTACCTCGGAGGTCA |
TGACCTCCGAGGTAA |
|
|
all_m61_AAV28_RS02210_m1 |
AAV28_RS02210_m1 |
cluster_227 |
all |
27 |
31.88 |
306 |
GGCCGGGCGCGCCCGGCGCGGCG++++ |
++++CGCCGCGCCGGGCGCGCCCGGCC |
|
|
all_m217_AAV28_RS07210_m2 |
AAV28_RS07210_m2 |
cluster_170 |
all |
11 |
13.86 |
279 |
CGACAAACGC+ |
+GCGTTTGTCG |
|
|
all_m1141_AAV28_RS28385_m1 |
AAV28_RS28385_m1 |
cluster_159 |
all |
22 |
13.86 |
77 |
CGTCA------------TTTAC |
GTAAA------------TGACG |
|
|
all_m1497_AAV28_RS38785_m2 |
AAV28_RS38785_m2 |
cluster_122 |
all |
16 |
15.99 |
138 |
GGAAY---AGTTCCA+ |
+TGGAACT---rTTCC |
|
|
all_m119_AAV28_RS02835_m4 |
AAV28_RS02835_m4 |
cluster_330 |
all |
8 |
11.09 |
314 |
TGCATGCA |
TGCATGCA |
|
|
all_m1349_AAV28_RS33335_m4 |
AAV28_RS33335_m4 |
cluster_33 |
all |
24 |
18.67 |
511 |
++++GTATATT---HAATATAT++ |
++ATATATTd---aATATAC++++ |
|
|
all_m23_AAV28_RS01495_m3 |
AAV28_RS01495_m3 |
cluster_130 |
all |
18 |
17.33 |
334 |
++++ATAwGCATATAAT+ |
+ATTATATGCWTAT++++ |
|
|
all_m53_AAV28_RS02140_m3 |
AAV28_RS02140_m3 |
cluster_8 |
all |
21 |
22.18 |
350 |
CACCCTCCCCCTCCTC+++++ |
+++++GAGGAGGGGGAGGGTG |
|
|
all_m254_AAV28_RS07505_m4 |
AAV28_RS07505_m4 |
cluster_11 |
all |
16 |
11.09 |
161 |
+++GCAA----TTTT+ |
+AAAA----TTGC+++ |
|
|
all_m922_AAV28_RS22315_m2 |
AAV28_RS22315_m2 |
cluster_99 |
all |
14 |
15.25 |
86 |
+TTTGGTAACCA++ |
++TGGTTACCAAA+ |
|
|
all_m434_AAV28_RS11985_m4 |
AAV28_RS11985_m4 |
cluster_249 |
all |
26 |
19.41 |
135 |
AAATAAATATAATT++++++++++++ |
++++++++++++AATTATATTTATTT |
|
|
all_m969_AAV28_RS23100_m4 |
AAV28_RS23100_m4 |
cluster_230 |
all |
24 |
16.64 |
117 |
ATGACG---------CTTGCG+++ |
+++CGCAAG---------CGTCAT |
|
|
all_m459_AAV28_RS12655_m4 |
AAV28_RS12655_m4 |
cluster_314 |
all |
12 |
15.25 |
98 |
+ACGTATGGGAC |
GTCCCATACGT+ |
|
|
all_m1348_AAV28_RS33335_m3 |
AAV28_RS33335_m3 |
cluster_33 |
all |
24 |
14.59 |
632 |
++++ATAAAw------aTATAT++ |
++ATATAT------WTTTAT++++ |
|
|
all_m773_AAV28_RS18275_m3 |
AAV28_RS18275_m3 |
cluster_202 |
all |
20 |
15.25 |
189 |
GAACCG---------CTGGA |
TCCAG---------CGGTTC |
|
|
all_m73_AAV28_RS02270_m3 |
AAV28_RS02270_m3 |
cluster_223 |
all |
9 |
8.32 |
190 |
+GGG-GCG+ |
+CGC-CCC+ |
|
|
all_m141_AAV28_RS03140_m1 |
AAV28_RS03140_m1 |
cluster_44 |
all |
18 |
24.95 |
239 |
CAGTGCAATTTTGCACTG |
CAGTGCAAAATTGCACTG |
|
|
all_m173_AAV28_RS05390_m3 |
AAV28_RS05390_m3 |
cluster_101 |
all |
26 |
13.86 |
350 |
+CTGCC--------------AGGCT+ |
+AGCCT--------------GGCAG+ |
|
|
all_m1_AAV28_RS00905_m1 |
AAV28_RS00905_m1 |
cluster_7 |
all |
15 |
13.86 |
280 |
++CGCGATCGCG+++ |
+++CGCGATCGCG++ |
|
|
all_m700_AAV28_RS16665_m5 |
AAV28_RS16665_m5 |
cluster_34 |
all |
23 |
27.73 |
350 |
GACTGATCGATCGATCAGTC+++ |
+++GACTGATCGATCGATCAGTC |
|
|
all_m1294_AAV28_RS31840_m4 |
AAV28_RS31840_m4 |
cluster_120 |
all |
15 |
14.16 |
394 |
++AAAATd--CATAA |
TTATG--HATTTT++ |
|
|
all_m799_AAV28_RS18740_m4 |
AAV28_RS18740_m4 |
cluster_162 |
all |
21 |
9.70 |
350 |
+AGGC----------GCC+++ |
+++GGC----------GCCT+ |
|
|
all_m723_AAV28_RS17490_m3 |
AAV28_RS17490_m3 |
cluster_2 |
all |
19 |
18.32 |
130 |
++++GAATCTCGADATTC+ |
+GAAThTCGAGATTC++++ |
|
|
all_m1215_AAV28_RS29810_m5 |
AAV28_RS29810_m5 |
cluster_120 |
all |
15 |
8.32 |
350 |
+++TAA----AAT++ |
++ATT----TTA+++ |
|
|
all_m783_AAV28_RS18380_m3 |
AAV28_RS18380_m3 |
cluster_149 |
all |
27 |
11.09 |
216 |
+TTCA-----------------TCGG+ |
+CCGA-----------------TGAA+ |
|
|
all_m1550_AAV28_RS41560_m5 |
AAV28_RS41560_m5 |
cluster_76 |
all |
12 |
16.64 |
115 |
CACATAACCACA |
TGTGGTTATGTG |
|
|
all_m91_AAV28_RS02555_m1 |
AAV28_RS02555_m1 |
cluster_146 |
all |
16 |
13.49 |
457 |
CAGGh-----wTCCTC |
GAGGAW-----DCCTG |
|
|
all_m913_AAV28_RS21965_m3 |
AAV28_RS21965_m3 |
cluster_10 |
all |
21 |
16.64 |
1026 |
+GGTTAAs------TTAACC+ |
+GGTTAA------STTAACC+ |
|
|
all_m137_AAV28_RS03080_m2 |
AAV28_RS03080_m2 |
cluster_230 |
all |
24 |
13.50 |
167 |
TTGAK-------------SCGCTC |
GAGCGs-------------mTCAA |
|
|
all_m437_AAV28_RS12120_m2 |
AAV28_RS12120_m2 |
cluster_71 |
all |
19 |
21.83 |
525 |
GCGGCCGr-kCCGCCCGC+ |
+GCGGGCGGM-YCGGCCGC |
|
|
all_m925_AAV28_RS22315_m5 |
AAV28_RS22315_m5 |
cluster_158 |
all |
12 |
12.48 |
117 |
+TTTGGTATA++ |
++TATACCAAA+ |
|
|
all_m124_AAV28_RS02840_m4 |
AAV28_RS02840_m4 |
cluster_208 |
all |
11 |
11.09 |
131 |
+CTCACAAC++ |
++GTTGTGAG+ |
|
|
all_m652_AAV28_RS16320_m2 |
AAV28_RS16320_m2 |
cluster_81 |
all |
23 |
16.99 |
629 |
TATATTw---------wATAATA |
TATTATW---------WAATATA |
|
|
all_m1187_AAV28_RS29085_m2 |
AAV28_RS29085_m2 |
cluster_11 |
all |
16 |
13.86 |
275 |
++++AAATCGATTT++ |
++AAATCGATTT++++ |
|
|
all_m1386_AAV28_RS34355_m1 |
AAV28_RS34355_m1 |
cluster_41 |
all |
15 |
11.93 |
293 |
GTCA-----GTTGA+ |
+TCAAC-----TGAC |
|
|
all_m1392_AAV28_RS34825_m2 |
AAV28_RS34825_m2 |
cluster_348 |
all |
10 |
11.09 |
86 |
AAGG--TATC |
GATA--CCTT |
|
|
all_m1309_AAV28_RS32085_m4 |
AAV28_RS32085_m4 |
cluster_244 |
all |
10 |
9.70 |
88 |
+TGGGGTT++ |
++AACCCCA+ |
|
|
all_m189_AAV28_RS06245_m4 |
AAV28_RS06245_m4 |
cluster_285 |
all |
26 |
13.86 |
70 |
ACCAC----------------GAAGC |
GCTTC----------------GTGGT |
|
|
all_m1069_AAV28_RS25485_m4 |
AAV28_RS25485_m4 |
cluster_212 |
all |
21 |
13.86 |
68 |
TTCGC-----------TGACG |
CGTCA-----------GCGAA |
|
|
all_m180_AAV28_RS05935_m5 |
AAV28_RS05935_m5 |
cluster_161 |
all |
20 |
11.09 |
207 |
CGCC----------GAGA++ |
++TCTC----------GGCG |
|
|
all_m845_AAV28_RS20595_m5 |
AAV28_RS20595_m5 |
cluster_223 |
all |
9 |
10.55 |
383 |
TCGCTCCG+ |
+CGGAGCGA |
|
|
all_m948_AAV28_RS22715_m3 |
AAV28_RS22715_m3 |
cluster_216 |
all |
24 |
13.48 |
231 |
+++++GGAGS--------BCCGCG |
CGCGGv--------sCTCC+++++ |
|
|
all_m803_AAV28_RS18940_m3 |
AAV28_RS18940_m3 |
cluster_3 |
all |
16 |
11.09 |
350 |
++++CCCGGAAT++++ |
++++ATTCCGGG++++ |
|
|
all_m1436_AAV28_RS36110_m1 |
AAV28_RS36110_m1 |
cluster_111 |
all |
20 |
23.58 |
523 |
ATCGAAy--sGAATTCCGAT |
ATCGGAATTCS--RTTCGAT |
|
|
all_m1209_AAV28_RS29730_m4 |
AAV28_RS29730_m4 |
cluster_178 |
all |
21 |
8.45 |
714 |
+++CTC--------aGAA+++ |
+++TTCT--------GAG+++ |
|
|
all_m983_AAV28_RS23240_m3 |
AAV28_RS23240_m3 |
cluster_61 |
all |
11 |
12.78 |
601 |
TTAAAHTATT+ |
+AATAdTTTAA |
|
|
all_m402_AAV28_RS11715_m2 |
AAV28_RS11715_m2 |
cluster_85 |
all |
21 |
13.93 |
304 |
++TGTGt-------CACACA+ |
+TGTGTG-------ACACA++ |
|
|
all_m746_AAV28_RS17810_m1 |
AAV28_RS17810_m1 |
cluster_10 |
all |
21 |
14.59 |
134 |
++++TTAACC---RTTTT+++ |
+++AAAAy---GGTTAA++++ |
|
|
all_m1276_AAV28_RS31495_m1 |
AAV28_RS31495_m1 |
cluster_393 |
all |
25 |
34.66 |
350 |
AATTATGATGATCATAATCATGATT |
AATCATGATTATGATCATCATAATT |
|
|
all_m398_AAV28_RS11695_m3 |
AAV28_RS11695_m3 |
cluster_22 |
all |
18 |
19.20 |
597 |
GATCACGa---yGTGATC |
GATCACR---TCGTGATC |
|
|
all_m903_AAV28_RS21710_m3 |
AAV28_RS21710_m3 |
cluster_167 |
all |
24 |
10.01 |
222 |
++TTA-------VGCGC+++++++ |
+++++++GCGCb-------TAA++ |
|
|
all_m990_AAV28_RS23295_m5 |
AAV28_RS23295_m5 |
cluster_7 |
all |
15 |
9.13 |
130 |
+++TCGW---CGC++ |
++GCG---WCGA+++ |
|
|
all_m167_AAV28_RS05160_m2 |
AAV28_RS05160_m2 |
cluster_73 |
all |
16 |
22.18 |
173 |
GTTGTTCGGAGTAGCC |
GGCTACTCCGAACAAC |
|
|
all_m839_AAV28_RS20445_m4 |
AAV28_RS20445_m4 |
cluster_166 |
all |
12 |
12.49 |
138 |
+GCTTS-SAAGC |
GCTTs-sAAGC+ |
|
|
all_m411_AAV28_RS11895_m1 |
AAV28_RS11895_m1 |
cluster_9 |
all |
32 |
29.11 |
700 |
++++++++ATTAAATATAAWWTATATTTTA++ |
++TAAAATATAwwTTATATTTAAT++++++++ |
|
|
all_m532_AAV28_RS14045_m2 |
AAV28_RS14045_m2 |
cluster_18 |
all |
14 |
18.05 |
233 |
ATCTCksAAGGATT |
AATCCTTSMGAGAT |
|
|
all_m598_AAV28_RS15625_m3 |
AAV28_RS15625_m3 |
cluster_123 |
all |
11 |
14.17 |
440 |
CCGGGVAAGGG |
CCCTTbCCCGG |
|
|
all_m1195_AAV28_RS29365_m5 |
AAV28_RS29365_m5 |
cluster_297 |
all |
14 |
19.41 |
166 |
TCGAGATTCCGGAG |
CTCCGGAATCTCGA |
|
|
all_m1415_AAV28_RS35710_m5 |
AAV28_RS35710_m5 |
cluster_286 |
all |
26 |
8.32 |
67 |
AAG--------------------ATT |
AAT--------------------CTT |
|
|
all_m1540_AAV28_RS40485_m5 |
AAV28_RS40485_m5 |
cluster_15 |
all |
14 |
13.86 |
123 |
CCGTA----TACGG |
CCGTA----TACGG |
|
|
all_m883_AAV28_RS21365_m3 |
AAV28_RS21365_m3 |
cluster_240 |
all |
16 |
11.79 |
86 |
ACAm------CGATT+ |
+AATCG------KTGT |
|
|
all_m583_AAV28_RS14920_m3 |
AAV28_RS14920_m3 |
cluster_62 |
all |
19 |
14.97 |
678 |
+CCGTS------MCGGCTC |
GAGCCGk------sACGG+ |
|
|
all_m885_AAV28_RS21365_m5 |
AAV28_RS21365_m5 |
cluster_240 |
all |
16 |
15.25 |
54 |
AAATCG-----AATTT |
AAATT-----CGATTT |
|
|
all_m1164_AAV28_RS28725_m4 |
AAV28_RS28725_m4 |
cluster_11 |
all |
16 |
12.79 |
816 |
++AAAAA--bTTAA++ |
++TTAAV--TTTTT++ |
|
|
all_m472_AAV28_RS12970_m2 |
AAV28_RS12970_m2 |
cluster_267 |
all |
11 |
12.48 |
264 |
CGGCA--GCAA |
TTGC--TGCCG |
|
|
all_m1019_AAV28_RS24450_m4 |
AAV28_RS24450_m4 |
cluster_59 |
all |
16 |
16.64 |
350 |
+CTTCCTTAACGC+++ |
+++GCGTTAAGGAAG+ |
|
|
all_m1081_AAV28_RS25830_m1 |
AAV28_RS25830_m1 |
cluster_75 |
all |
12 |
14.64 |
281 |
GGGTWATGGGT+ |
+ACCCATWACCC |
|
|
all_m177_AAV28_RS05935_m2 |
AAV28_RS05935_m2 |
cluster_332 |
all |
11 |
12.48 |
180 |
++CTTGAGCAT |
ATGCTCAAG++ |
|
|
all_m160_AAV28_RS03835_m5 |
AAV28_RS03835_m5 |
cluster_298 |
all |
26 |
11.41 |
516 |
++CAAG-------------bTTAA++ |
++TTAAV-------------CTTG++ |
|
|
all_m1099_AAV28_RS26100_m4 |
AAV28_RS26100_m4 |
cluster_182 |
all |
11 |
13.17 |
149 |
+TAGTTwCCAC |
GTGGWAACTA+ |
|
|
all_m584_AAV28_RS14920_m4 |
AAV28_RS14920_m4 |
cluster_62 |
all |
19 |
11.80 |
590 |
+CCGk--------CCGCT+ |
+AGCGG--------MCGG+ |
|
|
all_m609_AAV28_RS15805_m4 |
AAV28_RS15805_m4 |
cluster_85 |
all |
21 |
10.54 |
355 |
++TGTG---------ACAC++ |
++GTGT---------CACA++ |
|
|
all_m1158_AAV28_RS28665_m3 |
AAV28_RS28665_m3 |
cluster_1 |
all |
26 |
24.96 |
261 |
+++CATTATATAAWWTATATTT++++ |
++++AAATATAwwTTATATAATG+++ |
|
|
all_m1316_AAV28_RS32430_m1 |
AAV28_RS32430_m1 |
cluster_145 |
all |
11 |
15.25 |
212 |
ATGTCCCGGAC |
GTCCGGGACAT |
|
|
all_m605_AAV28_RS15740_m5 |
AAV28_RS15740_m5 |
cluster_272 |
all |
31 |
33.98 |
394 |
ATATATATTTATATAAATAAwATAT++++++ |
++++++ATATWTTATTTATATAAATATATAT |
|
|
all_m381_AAV28_RS11120_m1 |
AAV28_RS11120_m1 |
cluster_1 |
all |
26 |
15.94 |
484 |
++GATAAAT-----wTATT+++++++ |
+++++++AATAW-----ATTTATC++ |
|
|
all_m1473_AAV28_RS36930_m3 |
AAV28_RS36930_m3 |
cluster_88 |
all |
11 |
13.86 |
239 |
+ATATGTAACT |
AGTTACATAT+ |
|
|
all_m222_AAV28_RS07275_m2 |
AAV28_RS07275_m2 |
cluster_310 |
all |
15 |
20.79 |
144 |
AGTTCCACCACGTCG |
CGACGTGGTGGAACT |
|
|
all_m1096_AAV28_RS26100_m1 |
AAV28_RS26100_m1 |
cluster_182 |
all |
11 |
14.58 |
174 |
GTGGWTACTAG |
CTAGTAwCCAC |
|
|
all_m1222_AAV28_RS30335_m2 |
AAV28_RS30335_m2 |
cluster_59 |
all |
16 |
19.41 |
350 |
+TTTCGTTAACCATA+ |
+TATGGTTAACGAAA+ |
|
|
all_m265_AAV28_RS07770_m5 |
AAV28_RS07770_m5 |
cluster_188 |
all |
10 |
13.86 |
93 |
GAGTTCTGTC |
GACAGAACTC |
|
|
all_m481_AAV28_RS13115_m1 |
AAV28_RS13115_m1 |
cluster_83 |
all |
11 |
12.52 |
173 |
GTATw-mAGAA |
TTCTK-WATAC |
|
|
all_m1032_AAV28_RS24605_m2 |
AAV28_RS24605_m2 |
cluster_191 |
all |
20 |
15.25 |
53 |
CATGA---------ATGAGC |
GCTCAT---------TCATG |
|
|
all_m264_AAV28_RS07770_m4 |
AAV28_RS07770_m4 |
cluster_177 |
all |
24 |
11.09 |
143 |
+++GCGA------------TGCG+ |
+CGCA------------TCGC+++ |
|
|
all_m992_AAV28_RS23380_m2 |
AAV28_RS23380_m2 |
cluster_254 |
all |
27 |
11.09 |
91 |
+ATTG------------------CCAG |
CTGG------------------CAAT+ |
|
|
all_m108_AAV28_RS02685_m3 |
AAV28_RS02685_m3 |
cluster_251 |
all |
18 |
9.70 |
161 |
++++TCA-------TGCA |
TGCA-------TGA++++ |
|
|
all_m223_AAV28_RS07275_m3 |
AAV28_RS07275_m3 |
cluster_68 |
all |
27 |
9.70 |
167 |
GAC-------------------TCGT+ |
+ACGA-------------------GTC |
|
|
all_m248_AAV28_RS07470_m3 |
AAV28_RS07470_m3 |
cluster_77 |
all |
12 |
15.60 |
508 |
GCCTCCGYTTAA |
TTAArCGGAGGC |
|
|
all_m503_AAV28_RS13565_m3 |
AAV28_RS13565_m3 |
cluster_4 |
all |
10 |
9.70 |
97 |
+++GTCAAGC |
GCTTGAC+++ |
|
|
all_m844_AAV28_RS20595_m4 |
AAV28_RS20595_m4 |
cluster_306 |
all |
18 |
8.32 |
113 |
+ATG-----------CGC |
GCG-----------CAT+ |
|
|
all_m741_AAV28_RS17805_m1 |
AAV28_RS17805_m1 |
cluster_226 |
all |
27 |
12.48 |
22 |
AAAT-----------------AAACA+ |
+TGTTT-----------------ATTT |
|
|
all_m787_AAV28_RS18390_m2 |
AAV28_RS18390_m2 |
cluster_65 |
all |
15 |
12.48 |
81 |
ACGT----TACAT++ |
++ATGTA----ACGT |
|
|
all_m239_AAV28_RS07400_m4 |
AAV28_RS07400_m4 |
cluster_164 |
all |
15 |
13.86 |
350 |
+++CGCCCGGGCG++ |
++CGCCCGGGCG+++ |
|
|
all_m1258_AAV28_RS31130_m3 |
AAV28_RS31130_m3 |
cluster_215 |
all |
17 |
23.57 |
223 |
AAAAAAGCCTCTTTTTT |
AAAAAAGAGGCTTTTTT |
|
|
all_m1410_AAV28_RS35690_m5 |
AAV28_RS35690_m5 |
cluster_9 |
all |
32 |
36.04 |
350 |
+++++ATAAATAAATATAAAATATAATTTTC+ |
+GAAAATTATATTTTATATTTATTTAT+++++ |
|
|
all_m149_AAV28_RS03560_m4 |
AAV28_RS03560_m4 |
cluster_210 |
all |
11 |
11.09 |
147 |
TTATGGGG+++ |
+++CCCCATAA |
|
|
all_m1271_AAV28_RS31420_m1 |
AAV28_RS31420_m1 |
cluster_51 |
all |
15 |
13.90 |
354 |
TAATTk---mAATTA |
TAATTK---MAATTA |
|
|
all_m1546_AAV28_RS41560_m1 |
AAV28_RS41560_m1 |
cluster_76 |
all |
12 |
13.86 |
161 |
CACATAAGTA++ |
++TACTTATGTG |
|
|
all_m1000_AAV28_RS23535_m5 |
AAV28_RS23535_m5 |
cluster_205 |
all |
23 |
13.86 |
115 |
+GCGAT-----------CATCC+ |
+GGATG-----------ATCGC+ |
|
|
all_m749_AAV28_RS17810_m4 |
AAV28_RS17810_m4 |
cluster_286 |
all |
26 |
8.32 |
81 |
ACG--------------------AGT |
ACT--------------------CGT |
|
|
all_m1384_AAV28_RS34190_m4 |
AAV28_RS34190_m4 |
cluster_78 |
all |
20 |
20.82 |
168 |
CGCAGACTG----sTCTGCG |
CGCAGAS----CAGTCTGCG |
|
|
all_m702_AAV28_RS16910_m2 |
AAV28_RS16910_m2 |
cluster_357 |
all |
20 |
15.96 |
254 |
+TTTGTATr-----CAAA++ |
++TTTG-----YATACAAA+ |
|
|
all_m49_AAV28_RS02075_m4 |
AAV28_RS02075_m4 |
cluster_344 |
all |
10 |
11.39 |
160 |
+CAAAdGCCG |
CGGCHTTTG+ |
|
|
all_m285_AAV28_RS08105_m5 |
AAV28_RS08105_m5 |
cluster_165 |
all |
12 |
14.16 |
136 |
TTAAH-GCGCGT |
ACGCGC-dTTAA |
|
|
all_m798_AAV28_RS18740_m3 |
AAV28_RS18740_m3 |
cluster_162 |
all |
21 |
11.09 |
350 |
+GGGC----------GCCA++ |
++TGGC----------GCCC+ |
|
|
all_m947_AAV28_RS22715_m2 |
AAV28_RS22715_m2 |
cluster_304 |
all |
14 |
12.78 |
293 |
GCGGB---GGTTG+ |
+CAACC---vCCGC |
|
|
all_m269_AAV28_RS07815_m4 |
AAV28_RS07815_m4 |
cluster_279 |
all |
27 |
11.09 |
61 |
GCTC-------------------TGCT |
AGCA-------------------GAGC |
|
|
all_m743_AAV28_RS17805_m3 |
AAV28_RS17805_m3 |
cluster_125 |
all |
14 |
9.70 |
16 |
+GTT-----AAAA+ |
+TTTT-----AAC+ |
|
|
all_m199_AAV28_RS06565_m4 |
AAV28_RS06565_m4 |
cluster_381 |
all |
9 |
11.13 |
296 |
AACTaGAGG |
CCTCTAGTT |
|
|
all_m1519_AAV28_RS39745_m4 |
AAV28_RS39745_m4 |
cluster_48 |
all |
19 |
22.87 |
306 |
CTGTGAAAT--wTTCACAG |
CTGTGAAW--ATTTCACAG |
|
|
all_m1561_AAV28_RS45430_m1 |
AAV28_RS45430_m1 |
cluster_11 |
all |
16 |
19.41 |
350 |
ACAAAAATCAATTT++ |
++AAATTGATTTTTGT |
|
|
all_m819_AAV28_RS19540_m4 |
AAV28_RS19540_m4 |
cluster_267 |
all |
11 |
11.82 |
123 |
++GTGCAWTGC |
GCAwTGCAC++ |
|
|
all_m937_AAV28_RS22405_m2 |
AAV28_RS22405_m2 |
cluster_128 |
all |
20 |
22.18 |
350 |
+TTAAAAAAAAAATAAC+++ |
+++GTTATTTTTTTTTTAA+ |
|
|
all_m71_AAV28_RS02270_m1 |
AAV28_RS02270_m1 |
cluster_8 |
all |
21 |
11.85 |
397 |
++++++CCCCT-yCCC+++++ |
+++++GGGR-AGGGG++++++ |
|
|
all_m299_AAV28_RS08640_m4 |
AAV28_RS08640_m4 |
cluster_313 |
all |
17 |
15.25 |
37 |
+TCAGC-----GATGAA |
TTCATC-----GCTGA+ |
|
|
all_m1027_AAV28_RS24585_m2 |
AAV28_RS24585_m2 |
cluster_72 |
all |
12 |
11.09 |
83 |
+AATCG--CAT+ |
+ATG--CGATT+ |
|
|
all_m206_AAV28_RS06935_m1 |
AAV28_RS06935_m1 |
cluster_25 |
all |
12 |
15.25 |
171 |
AACGA-TGCTTA |
TAAGCA-TCGTT |
|
|
all_m378_AAV28_RS10485_m3 |
AAV28_RS10485_m3 |
cluster_346 |
all |
16 |
11.09 |
118 |
AGCA--------TCAG |
CTGA--------TGCT |
|
|
all_m1367_AAV28_RS33795_m2 |
AAV28_RS33795_m2 |
cluster_291 |
all |
12 |
13.86 |
202 |
AATTAACGGG++ |
++CCCGTTAATT |
|
|
all_m1221_AAV28_RS30335_m1 |
AAV28_RS30335_m1 |
cluster_59 |
all |
16 |
19.41 |
350 |
+TATGGTTAACCATA+ |
+TATGGTTAACCATA+ |
|
|
all_m612_AAV28_RS15810_m2 |
AAV28_RS15810_m2 |
cluster_175 |
all |
24 |
15.56 |
262 |
CGCGTC-----------bGACGG+ |
+CCGTCV-----------GACGCG |
|
|
all_m960_AAV28_RS23030_m5 |
AAV28_RS23030_m5 |
cluster_115 |
all |
10 |
11.09 |
350 |
+CCTTAACG+ |
+CGTTAAGG+ |
|
|
all_m1445_AAV28_RS36200_m5 |
AAV28_RS36200_m5 |
cluster_1 |
all |
26 |
24.96 |
700 |
++++ATTATWWATTATATTTAAT+++ |
+++ATTAAATATAATwwATAAT++++ |
|
|
all_m1235_AAV28_RS30560_m5 |
AAV28_RS30560_m5 |
cluster_93 |
all |
11 |
13.86 |
350 |
+AGAGAGCGCC |
GGCGCTCTCT+ |
|
|
all_m1165_AAV28_RS28725_m5 |
AAV28_RS28725_m5 |
cluster_11 |
all |
16 |
12.53 |
1064 |
+++CAAM-GTTTTT++ |
++AAAAAC-kTTG+++ |
|
|
all_m1275_AAV28_RS31420_m5 |
AAV28_RS31420_m5 |
cluster_51 |
all |
15 |
16.66 |
354 |
TAATTk--TCAATTA |
TAATTGA--MAATTA |
|
|
all_m1095_AAV28_RS26085_m5 |
AAV28_RS26085_m5 |
cluster_152 |
all |
19 |
18.73 |
153 |
++TCCATTyTACTTGC+++ |
+++GCAAGTARAATGGA++ |
|
|
all_m1300_AAV28_RS32005_m5 |
AAV28_RS32005_m5 |
cluster_153 |
all |
12 |
15.25 |
208 |
GGACAGGAGAG+ |
+CTCTCCTGTCC |
|
|
all_m997_AAV28_RS23535_m2 |
AAV28_RS23535_m2 |
cluster_155 |
all |
20 |
15.25 |
197 |
CTTCGC------CGCAA+++ |
+++TTGCG------GCGAAG |
|
|
all_m567_AAV28_RS14600_m2 |
AAV28_RS14600_m2 |
cluster_200 |
all |
27 |
12.78 |
271 |
+GTTGC----------------VAAGC |
GCTTb----------------GCAAC+ |
|
|
all_m421_AAV28_RS11965_m1 |
AAV28_RS11965_m1 |
cluster_249 |
all |
26 |
18.36 |
483 |
+++TATATTGMAATATA+++++++++ |
+++++++++TATATTkCAATATA+++ |
|
|
all_m1538_AAV28_RS40485_m3 |
AAV28_RS40485_m3 |
cluster_15 |
all |
14 |
11.61 |
530 |
GCGTA-----GCGG |
CCGc-----TACGC |
|
|
all_m549_AAV28_RS14175_m4 |
AAV28_RS14175_m4 |
cluster_19 |
all |
17 |
13.86 |
51 |
++++++CGCACCATAG+ |
+CTATGGTGCG++++++ |
|
|
all_m1134_AAV28_RS28285_m4 |
AAV28_RS28285_m4 |
cluster_8 |
all |
21 |
15.97 |
222 |
++++++TGGTGWGAGGGT+++ |
+++ACCCTCwCACCA++++++ |
|
|
all_m215_AAV28_RS06940_m5 |
AAV28_RS06940_m5 |
cluster_41 |
all |
15 |
17.33 |
72 |
++CAGCTTKGGTGAC |
GTCACCmAAGCTG++ |
|
|
all_m293_AAV28_RS08350_m3 |
AAV28_RS08350_m3 |
cluster_127 |
all |
11 |
12.48 |
89 |
CGCCC--TATT |
AATA--GGGCG |
|
|
all_m407_AAV28_RS11845_m2 |
AAV28_RS11845_m2 |
cluster_61 |
all |
11 |
9.99 |
1050 |
+AATAdTTA++ |
++TAAHTATT+ |
|
|
all_m64_AAV28_RS02210_m4 |
AAV28_RS02210_m4 |
cluster_227 |
all |
27 |
37.43 |
306 |
GGCCGGGCGCGCCCGCCGCGCGGGGCC |
GGCCCCGCGCGGCGGGCGCGCCCGGCC |
|
|
all_m964_AAV28_RS23085_m4 |
AAV28_RS23085_m4 |
cluster_12 |
all |
14 |
13.86 |
166 |
++AGATATAATT++ |
++AATTATATCT++ |
|
|
all_m208_AAV28_RS06935_m3 |
AAV28_RS06935_m3 |
cluster_25 |
all |
12 |
16.64 |
171 |
AACGATTGCTTA |
TAAGCAATCGTT |
|
|
all_m426_AAV28_RS11970_m1 |
AAV28_RS11970_m1 |
cluster_217 |
all |
21 |
24.95 |
350 |
+++ATATATTTTCGAAATATA |
TATATTTCGAAAATATAT+++ |
|
|
all_m772_AAV28_RS18275_m2 |
AAV28_RS18275_m2 |
cluster_202 |
all |
20 |
11.78 |
167 |
++ACCr---------CCGGA |
TCCGG---------YGGT++ |
|
|
all_m309_AAV28_RS08955_m4 |
AAV28_RS08955_m4 |
cluster_81 |
all |
23 |
9.01 |
339 |
+ATA--------------KATT+ |
+AATm--------------TAT+ |
|
|
all_m879_AAV28_RS21195_m4 |
AAV28_RS21195_m4 |
cluster_181 |
all |
19 |
26.34 |
255 |
TTGCTGCAGCGCAGCAGCA |
TGCTGCTGCGCTGCAGCAA |
|
|
all_m112_AAV28_RS02770_m2 |
AAV28_RS02770_m2 |
cluster_180 |
all |
24 |
17.38 |
161 |
+ATTTCTA----------SCGGAT |
ATCCGs----------TAGAAAT+ |
|
|
all_m1239_AAV28_RS30570_m4 |
AAV28_RS30570_m4 |
cluster_322 |
all |
7 |
9.70 |
132 |
CCATCCG |
CGGATGG |
|
|
all_m978_AAV28_RS23200_m3 |
AAV28_RS23200_m3 |
cluster_295 |
all |
18 |
12.48 |
122 |
+CGGTG-------GCGA+ |
+TCGC-------CACCG+ |
|
|
all_m323_AAV28_RS09370_m3 |
AAV28_RS09370_m3 |
cluster_9 |
all |
32 |
44.36 |
199 |
AAAAAAATAAATAAAATATTTTATTTTTTTTA |
TAAAAAAAATAAAATATTTTATTTATTTTTTT |
|
|
all_m1398_AAV28_RS34875_m3 |
AAV28_RS34875_m3 |
cluster_27 |
all |
19 |
24.96 |
541 |
TTGAAATTTMTTTTTTCAA |
TTGAAAAAAkAAATTTCAA |
|
|
all_m371_AAV28_RS10455_m1 |
AAV28_RS10455_m1 |
cluster_110 |
all |
17 |
12.89 |
218 |
++CGAGT-----aCGCC |
GGCGT-----ACTCG++ |
|
|
all_m502_AAV28_RS13565_m2 |
AAV28_RS13565_m2 |
cluster_395 |
all |
22 |
29.40 |
271 |
TTTATCTTGACdTCAAGATAAA |
TTTATCTTGAHGTCAAGATAAA |
|
|
all_m97_AAV28_RS02615_m2 |
AAV28_RS02615_m2 |
cluster_54 |
all |
14 |
12.00 |
568 |
++AATTT--AAATT |
AATTt--aAATT++ |
|
|
all_m1360_AAV28_RS33735_m5 |
AAV28_RS33735_m5 |
cluster_8 |
all |
21 |
16.64 |
225 |
+++++GGGGAGAGGGTG++++ |
++++CACCCTCTCCCC+++++ |
|
|
all_m1260_AAV28_RS31130_m5 |
AAV28_RS31130_m5 |
cluster_198 |
all |
24 |
9.70 |
139 |
++AAA-------------CATC++ |
++GATG-------------TTT++ |
|
|
all_m943_AAV28_RS22700_m3 |
AAV28_RS22700_m3 |
cluster_351 |
all |
11 |
12.01 |
340 |
AGAAm-kTTCT |
AGAAM-KTTCT |
|
|
all_m529_AAV28_RS13860_m4 |
AAV28_RS13860_m4 |
cluster_210 |
all |
11 |
11.81 |
256 |
CCCCT--rGGG |
CCCY--AGGGG |
|
|
all_m255_AAV28_RS07505_m5 |
AAV28_RS07505_m5 |
cluster_178 |
all |
21 |
11.79 |
306 |
++CTTy--------GAAAA++ |
++TTTTC--------RAAG++ |
|
|
all_m587_AAV28_RS14965_m2 |
AAV28_RS14965_m2 |
cluster_94 |
all |
10 |
13.86 |
241 |
GGGTTGGAGG |
CCTCCAACCC |
|
|
all_m236_AAV28_RS07400_m1 |
AAV28_RS07400_m1 |
cluster_8 |
all |
21 |
12.11 |
760 |
+++++CCCCCb-sCCC+++++ |
+++++GGGS-VGGGGG+++++ |
|
|
all_m1062_AAV28_RS25280_m2 |
AAV28_RS25280_m2 |
cluster_10 |
all |
21 |
17.37 |
807 |
+TGGTTAM------STTAACC |
GGTTAAs------kTAACCA+ |
|
|
all_m240_AAV28_RS07400_m5 |
AAV28_RS07400_m5 |
cluster_29 |
all |
28 |
12.48 |
350 |
CCCCC-----------------GCGC++ |
++GCGC-----------------GGGGG |
|
|
all_m993_AAV28_RS23380_m3 |
AAV28_RS23380_m3 |
cluster_95 |
all |
12 |
13.17 |
81 |
ATTG--WCATTT |
AAATGw--CAAT |
|
|
all_m1029_AAV28_RS24585_m4 |
AAV28_RS24585_m4 |
cluster_69 |
all |
12 |
14.58 |
88 |
TTTTGYATGGG+ |
+CCCATrCAAAA |
|
|
all_m214_AAV28_RS06940_m4 |
AAV28_RS06940_m4 |
cluster_304 |
all |
14 |
10.43 |
68 |
GCTG------yTGA |
TCAR------CAGC |
|
|
all_m695_AAV28_RS16610_m5 |
AAV28_RS16610_m5 |
cluster_293 |
all |
9 |
11.09 |
80 |
CCGATTAT+ |
+ATAATCGG |
|
|
all_m340_AAV28_RS09930_m5 |
AAV28_RS09930_m5 |
cluster_343 |
all |
17 |
23.57 |
179 |
TTTATTTTTCCATTTTC |
GAAAATGGAAAAATAAA |
|
|
all_m1284_AAV28_RS31565_m4 |
AAV28_RS31565_m4 |
cluster_258 |
all |
21 |
29.11 |
117 |
TGTTCCTCTCCCTCCCCCCTC |
GAGGGGGGAGGGAGAGGAACA |
|
|
all_m1150_AAV28_RS28390_m5 |
AAV28_RS28390_m5 |
cluster_150 |
all |
21 |
13.86 |
100 |
++CTAAA--------TTTAT+ |
+ATAAA--------TTTAG++ |
|
|
all_m975_AAV28_RS23160_m5 |
AAV28_RS23160_m5 |
cluster_12 |
all |
14 |
9.70 |
187 |
+++++TATATGA++ |
++TCATATA+++++ |
|
|
all_m657_AAV28_RS16380_m2 |
AAV28_RS16380_m2 |
cluster_275 |
all |
8 |
11.09 |
85 |
CGTCTCCA |
TGGAGACG |
|
|
all_m853_AAV28_RS20670_m3 |
AAV28_RS20670_m3 |
cluster_98 |
all |
12 |
13.86 |
97 |
+TCGTCCAAGC+ |
+GCTTGGACGA+ |
|
|
all_m872_AAV28_RS21115_m2 |
AAV28_RS21115_m2 |
cluster_133 |
all |
20 |
13.86 |
128 |
GTCCTG----------GGAC |
GTCC----------CAGGAC |
|
|
all_m350_AAV28_RS10255_m5 |
AAV28_RS10255_m5 |
cluster_300 |
all |
10 |
9.28 |
303 |
+ACA-CGGA+ |
+TCCG-TGT+ |
|
|
all_m38_AAV28_RS01975_m3 |
AAV28_RS01975_m3 |
cluster_211 |
all |
9 |
9.70 |
350 |
+GCGAAAC+ |
+GTTTCGC+ |
|
|
all_m1548_AAV28_RS41560_m3 |
AAV28_RS41560_m3 |
cluster_76 |
all |
12 |
13.86 |
161 |
CACATAAGTC++ |
++GACTTATGTG |
|
|
all_m610_AAV28_RS15805_m5 |
AAV28_RS15805_m5 |
cluster_85 |
all |
21 |
18.33 |
508 |
+GCGTGh------TCACACGC |
GCGTGTGA------DCACGC+ |
|
|
all_m357_AAV28_RS10315_m2 |
AAV28_RS10315_m2 |
cluster_231 |
all |
26 |
13.87 |
116 |
++++CCAAr----------sGCCCG+ |
+CGGGCS----------YTTGG++++ |
|
|
all_m569_AAV28_RS14600_m4 |
AAV28_RS14600_m4 |
cluster_317 |
all |
15 |
11.09 |
149 |
CAAC----AGGG+++ |
+++CCCT----GTTG |
|
|
all_m1272_AAV28_RS31420_m2 |
AAV28_RS31420_m2 |
cluster_291 |
all |
12 |
15.25 |
159 |
+ATTGACGGAGT |
ACTCCGTCAAT+ |
|
|
all_m474_AAV28_RS12970_m4 |
AAV28_RS12970_m4 |
cluster_125 |
all |
14 |
16.64 |
350 |
+ATTTGCGCAAAT+ |
+ATTTGCGCAAAT+ |
|
|
all_m30_AAV28_RS01725_m5 |
AAV28_RS01725_m5 |
cluster_71 |
all |
19 |
18.72 |
504 |
+CGGCCGs----GGCCGCA |
TGCGGCC----SCGGCCG+ |
|
|
all_m487_AAV28_RS13260_m2 |
AAV28_RS13260_m2 |
cluster_8 |
all |
21 |
18.02 |
173 |
++AGGGGGAGGAGGG++++++ |
++++++CCCTCCTCCCCCT++ |
|
|
all_m1038_AAV28_RS24730_m3 |
AAV28_RS24730_m3 |
cluster_332 |
all |
11 |
11.09 |
234 |
++CTGCACAG+ |
+CTGTGCAG++ |
|
|
all_m1008_AAV28_RS24040_m3 |
AAV28_RS24040_m3 |
cluster_6 |
all |
9 |
11.09 |
156 |
+CAAATTAC |
GTAATTTG+ |
|
|
all_m1110_AAV28_RS26305_m5 |
AAV28_RS26305_m5 |
cluster_246 |
all |
12 |
10.54 |
462 |
+GTTGCCCC+++ |
+++GGGGCAAC+ |
|
|
all_m900_AAV28_RS21665_m5 |
AAV28_RS21665_m5 |
cluster_1 |
all |
26 |
30.50 |
350 |
AGATATAATATATATTATATCT++++ |
++++AGATATAATATATATTATATCT |
|
|
all_m1020_AAV28_RS24450_m5 |
AAV28_RS24450_m5 |
cluster_10 |
all |
21 |
12.48 |
247 |
++++TAAC------TTAAC++ |
++GTTAA------GTTA++++ |
|
|
all_m362_AAV28_RS10400_m2 |
AAV28_RS10400_m2 |
cluster_203 |
all |
16 |
16.65 |
258 |
ATAGCGw---GCTATC |
GATAGC---WCGCTAT |
|
|
all_m854_AAV28_RS20670_m4 |
AAV28_RS20670_m4 |
cluster_39 |
all |
10 |
11.39 |
145 |
GATCbATGC+ |
+GCATVGATC |
|
|
all_m1377_AAV28_RS33965_m2 |
AAV28_RS33965_m2 |
cluster_170 |
all |
11 |
10.05 |
322 |
++ACA-gCGCC |
GGCGC-TGT++ |
|
|
all_m515_AAV28_RS13725_m5 |
AAV28_RS13725_m5 |
cluster_371 |
all |
19 |
11.09 |
104 |
ATTT-----------TCAA |
TTGA-----------AAAT |
|
|
all_m761_AAV28_RS18030_m1 |
AAV28_RS18030_m1 |
cluster_74 |
all |
15 |
14.16 |
384 |
+TATATC---dTAAA |
TTTAH---GATATA+ |
|
|
all_m1153_AAV28_RS28625_m3 |
AAV28_RS28625_m3 |
cluster_12 |
all |
14 |
11.09 |
208 |
++++ATAT-TCAA+ |
+TTGA-ATAT++++ |
|
|
all_m752_AAV28_RS17915_m2 |
AAV28_RS17915_m2 |
cluster_114 |
all |
10 |
12.48 |
92 |
+GCAACGACG |
CGTCGTTGC+ |
|
|
all_m181_AAV28_RS06055_m1 |
AAV28_RS06055_m1 |
cluster_11 |
all |
16 |
12.53 |
626 |
++CAAAAv--bTTTC+ |
+GAAAV--BTTTTG++ |
|
|
all_m855_AAV28_RS20670_m5 |
AAV28_RS20670_m5 |
cluster_205 |
all |
23 |
10.26 |
279 |
++CGAC------------GTCG+ |
+CGAC------------GTCG++ |
|
|
all_m931_AAV28_RS22385_m1 |
AAV28_RS22385_m1 |
cluster_116 |
all |
27 |
10.03 |
363 |
+AATs------------------CGCG |
CGCG------------------SATT+ |
|
|
all_m1442_AAV28_RS36200_m2 |
AAV28_RS36200_m2 |
cluster_1 |
all |
26 |
12.53 |
599 |
++++++AATw---rATATA+++++++ |
+++++++TATATY---WATT++++++ |
|
|
all_m198_AAV28_RS06565_m3 |
AAV28_RS06565_m3 |
cluster_291 |
all |
12 |
10.46 |
271 |
+CCTTSAAT+++ |
+++ATTsAAGG+ |
|
|
all_m572_AAV28_RS14710_m2 |
AAV28_RS14710_m2 |
cluster_35 |
all |
14 |
10.55 |
151 |
++++ACCC--GGGA |
TCCC--GGGT++++ |
|
|
all_m203_AAV28_RS06855_m3 |
AAV28_RS06855_m3 |
cluster_1 |
all |
26 |
12.48 |
350 |
++++++ATTTA---ATAT++++++++ |
++++++++ATAT---TAAAT++++++ |
|
|
all_m1338_AAV28_RS33255_m3 |
AAV28_RS33255_m3 |
cluster_366 |
all |
27 |
12.48 |
98 |
GCAGC------------------TCCG |
CGGA------------------GCTGC |
|
|
all_m1172_AAV28_RS28985_m2 |
AAV28_RS28985_m2 |
cluster_337 |
all |
22 |
12.48 |
241 |
CATCG------ATCG+++++++ |
+++++++CGAT------CGATG |
|
|
all_m671_AAV28_RS16520_m1 |
AAV28_RS16520_m1 |
cluster_283 |
all |
19 |
24.95 |
164 |
+TTATTTATCGATAAATAA |
TTATTTATCGATAAATAA+ |
|
|
all_m1066_AAV28_RS25485_m1 |
AAV28_RS25485_m1 |
cluster_200 |
all |
27 |
14.56 |
122 |
TGGTGC---------------mGAAG+ |
+CTTCK---------------GCACCA |
|
|
all_m1045_AAV28_RS25035_m5 |
AAV28_RS25035_m5 |
cluster_40 |
all |
20 |
22.18 |
350 |
CTGCCTGC----TCGCAGGC |
GCCTGCGA----GCAGGCAG |
|
|
all_m453_AAV28_RS12325_m3 |
AAV28_RS12325_m3 |
cluster_54 |
all |
14 |
15.54 |
284 |
CCAATCC--VAATG |
CATTb--GGATTGG |
|
|
all_m596_AAV28_RS15625_m1 |
AAV28_RS15625_m1 |
cluster_123 |
all |
11 |
15.25 |
350 |
CCGGCAAAGGG |
CCCTTTGCCGG |
|
|
all_m1467_AAV28_RS36580_m2 |
AAV28_RS36580_m2 |
cluster_276 |
all |
11 |
11.81 |
131 |
ATAAr-TCAA+ |
+TTGA-YTTAT |
|
|
all_m676_AAV28_RS16560_m1 |
AAV28_RS16560_m1 |
cluster_249 |
all |
26 |
13.86 |
122 |
++ATATA----TATAT++++++++++ |
++++++++++ATATA----TATAT++ |
|
|
all_m553_AAV28_RS14265_m3 |
AAV28_RS14265_m3 |
cluster_24 |
all |
33 |
40.20 |
350 |
+ATGATATATCATATAATATATTATATATA+++ |
+++TATATATAATATATTATATGATATATCAT+ |
|
|
all_m281_AAV28_RS08105_m1 |
AAV28_RS08105_m1 |
cluster_305 |
all |
27 |
8.70 |
350 |
+ACGs------------------bGCA |
TGCV------------------SCGT+ |
|
|
all_m1507_AAV28_RS39495_m2 |
AAV28_RS39495_m2 |
cluster_250 |
all |
25 |
16.64 |
97 |
TTTGCA-------------CAATTC |
GAATTG-------------TGCAAA |
|
|
all_m929_AAV28_RS22335_m4 |
AAV28_RS22335_m4 |
cluster_58 |
all |
17 |
17.34 |
265 |
GGTCCTs----GTTCGC |
GCGAAC----SAGGACC |
|
|
all_m233_AAV28_RS07385_m3 |
AAV28_RS07385_m3 |
cluster_61 |
all |
11 |
12.52 |
950 |
AATTy-TTAAC |
GTTAA-RAATT |
|
|
all_m850_AAV28_RS20650_m5 |
AAV28_RS20650_m5 |
cluster_8 |
all |
21 |
22.18 |
254 |
+++CCTTCTCCCCCCCCCC++ |
++GGGGGGGGGGAGAAGG+++ |
|
|
all_m81_AAV28_RS02435_m1 |
AAV28_RS02435_m1 |
cluster_1 |
all |
26 |
21.16 |
1002 |
++++ATTATATAwwATATAAT+++++ |
+++++ATTATATWWTATATAAT++++ |
|
|
all_m1471_AAV28_RS36930_m1 |
AAV28_RS36930_m1 |
cluster_24 |
all |
33 |
41.59 |
239 |
++ATATGTAACATTATATATAATATATTATAT+ |
+ATATAATATATTATATATAATGTTACATAT++ |
|
|
all_m895_AAV28_RS21550_m5 |
AAV28_RS21550_m5 |
cluster_189 |
all |
12 |
14.17 |
180 |
AGGAGGvAGAG+ |
+CTCTBCCTCCT |
|
|
all_m82_AAV28_RS02435_m2 |
AAV28_RS02435_m2 |
cluster_241 |
all |
22 |
15.94 |
700 |
++ATTCTAwTATAT++++++++ |
++++++++ATATAWTAGAAT++ |
|
|
all_m1368_AAV28_RS33795_m3 |
AAV28_RS33795_m3 |
cluster_220 |
all |
11 |
12.48 |
152 |
++CCACAAAAA |
TTTTTGTGG++ |
|
|
all_m1270_AAV28_RS31410_m5 |
AAV28_RS31410_m5 |
cluster_288 |
all |
12 |
16.64 |
95 |
CGTGACGTCACG |
CGTGACGTCACG |
|
|
all_m1356_AAV28_RS33735_m1 |
AAV28_RS33735_m1 |
cluster_8 |
all |
21 |
19.41 |
350 |
CACCCTCCCCCTCT+++++++ |
+++++++AGAGGGGGAGGGTG |
|
|
all_m822_AAV28_RS19565_m2 |
AAV28_RS19565_m2 |
cluster_148 |
all |
14 |
12.48 |
98 |
+CGAGC----TCGA |
TCGA----GCTCG+ |
|
|
all_m42_AAV28_RS02065_m2 |
AAV28_RS02065_m2 |
cluster_50 |
all |
17 |
12.48 |
159 |
TATT--------CAATA |
TATTG--------AATA |
|
|
all_m479_AAV28_RS13025_m4 |
AAV28_RS13025_m4 |
cluster_150 |
all |
21 |
14.18 |
202 |
+++CAAAm----CGGTTT+++ |
+++AAACCG----KTTTG+++ |
|
|
all_m1562_AAV28_RS45430_m2 |
AAV28_RS45430_m2 |
cluster_150 |
all |
21 |
13.86 |
700 |
+++TAAAW------WTTTTC+ |
+GAAAAw------wTTTA+++ |
|
|
all_m724_AAV28_RS17490_m4 |
AAV28_RS17490_m4 |
cluster_183 |
all |
11 |
9.70 |
78 |
++GATC--AAT |
ATT--GATC++ |
|
|
all_m1383_AAV28_RS34190_m3 |
AAV28_RS34190_m3 |
cluster_78 |
all |
20 |
16.68 |
168 |
CGCAGAs------sTCTGCG |
CGCAGAS------STCTGCG |
|
|
all_m35_AAV28_RS01755_m5 |
AAV28_RS01755_m5 |
cluster_161 |
all |
20 |
8.32 |
211 |
++CCG--------GGA++++ |
++++TCC--------CGG++ |
|
|
all_m703_AAV28_RS16910_m3 |
AAV28_RS16910_m3 |
cluster_67 |
all |
12 |
9.70 |
110 |
++AAA--AAAA+ |
+TTTT--TTT++ |
|
|
all_m824_AAV28_RS19565_m4 |
AAV28_RS19565_m4 |
cluster_236 |
all |
14 |
12.48 |
68 |
CTTGA----GAGT+ |
+ACTC----TCAAG |
|
|
all_m965_AAV28_RS23085_m5 |
AAV28_RS23085_m5 |
cluster_12 |
all |
14 |
16.64 |
161 |
AATGATATAATT++ |
++AATTATATCATT |
|
|
all_m1289_AAV28_RS31795_m4 |
AAV28_RS31795_m4 |
cluster_176 |
all |
28 |
9.70 |
79 |
TATT-------------------TAT++ |
++ATA-------------------AATA |
|
|
all_m75_AAV28_RS02270_m5 |
AAV28_RS02270_m5 |
cluster_56 |
all |
14 |
9.02 |
618 |
+++GGG--RGGC++ |
++GCCy--CCC+++ |
|
|
all_m1419_AAV28_RS35785_m4 |
AAV28_RS35785_m4 |
cluster_203 |
all |
16 |
12.48 |
118 |
++TAGC---ACGCT++ |
++AGCGT---GCTA++ |
|
|
all_m1133_AAV28_RS28285_m3 |
AAV28_RS28285_m3 |
cluster_139 |
all |
27 |
10.40 |
110 |
ATTT------------------kCGA+ |
+TCGM------------------AAAT |
|
|
all_m1064_AAV28_RS25280_m4 |
AAV28_RS25280_m4 |
cluster_10 |
all |
21 |
12.48 |
230 |
++GGTA--------TTAAC++ |
++GTTAA--------TACC++ |
|
|
all_m1296_AAV28_RS32005_m1 |
AAV28_RS32005_m1 |
cluster_153 |
all |
12 |
16.64 |
208 |
GAACAGGAGAGG |
CCTCTCCTGTTC |
|
|
all_m884_AAV28_RS21365_m4 |
AAV28_RS21365_m4 |
cluster_240 |
all |
16 |
11.09 |
59 |
ACAT-------AATT+ |
+AATT-------ATGT |
|
|
all_m710_AAV28_RS17165_m5 |
AAV28_RS17165_m5 |
cluster_3 |
all |
16 |
18.02 |
242 |
GCGCCCCCCTATG+++ |
+++CATAGGGGGGCGC |
|
|
all_m458_AAV28_RS12655_m3 |
AAV28_RS12655_m3 |
cluster_84 |
all |
19 |
13.86 |
98 |
CCAT------AACGCA+++ |
+++TGCGTT------ATGG |
|
|
all_m187_AAV28_RS06245_m2 |
AAV28_RS06245_m2 |
cluster_319 |
all |
11 |
14.56 |
100 |
AAAAAmCCTCG |
CGAGGKTTTTT |
|
|
all_m1310_AAV28_RS32085_m5 |
AAV28_RS32085_m5 |
cluster_49 |
all |
17 |
9.70 |
69 |
++TAC--------GGGT |
ACCC--------GTA++ |
|
|
all_m579_AAV28_RS14840_m4 |
AAV28_RS14840_m4 |
cluster_8 |
all |
21 |
18.02 |
203 |
+++++CTCCCTCCCCCCG+++ |
+++CGGGGGGAGGGAG+++++ |
|
|
all_m840_AAV28_RS20445_m5 |
AAV28_RS20445_m5 |
cluster_47 |
all |
27 |
14.57 |
121 |
TTTGC----------------SGCAAA |
TTTGCs----------------GCAAA |
|
|
all_m896_AAV28_RS21665_m1 |
AAV28_RS21665_m1 |
cluster_24 |
all |
33 |
27.73 |
350 |
++AGATATAATATATTATATCT+++++++++++ |
+++++++++++AGATATAATATATTATATCT++ |
|
|
all_m1181_AAV28_RS29020_m1 |
AAV28_RS29020_m1 |
cluster_99 |
all |
14 |
13.28 |
149 |
+TTTGGMAACG+++ |
+++CGTTKCCAAA+ |
|
|
all_m397_AAV28_RS11695_m2 |
AAV28_RS11695_m2 |
cluster_220 |
all |
11 |
13.86 |
350 |
GATCACGAAA+ |
+TTTCGTGATC |
|
|
all_m1521_AAV28_RS40230_m1 |
AAV28_RS40230_m1 |
cluster_66 |
all |
11 |
13.86 |
136 |
+TAGCCGTCCT |
AGGACGGCTA+ |
|
|
all_m1246_AAV28_RS30740_m1 |
AAV28_RS30740_m1 |
cluster_75 |
all |
12 |
16.64 |
226 |
ACCCATAACCAA |
TTGGTTATGGGT |
|
|
all_m541_AAV28_RS14160_m1 |
AAV28_RS14160_m1 |
cluster_45 |
all |
19 |
13.86 |
233 |
+AATCA-------TTATT+ |
+AATAA-------TGATT+ |
|
|
all_m151_AAV28_RS03590_m1 |
AAV28_RS03590_m1 |
cluster_103 |
all |
18 |
21.52 |
561 |
+GCGCGCAWTTGCGCGC+ |
+GCGCGCAAwTGCGCGC+ |
|
|
all_m464_AAV28_RS12750_m4 |
AAV28_RS12750_m4 |
cluster_125 |
all |
14 |
11.79 |
271 |
+ATTC--wAAAA++ |
++TTTTW--GAAT+ |
|
|
all_m423_AAV28_RS11965_m3 |
AAV28_RS11965_m3 |
cluster_249 |
all |
26 |
29.81 |
227 |
+++TATATTGAAATATAATT-mAATT |
AATTK-AATTATATTTCAATATA+++ |
|
|
all_m326_AAV28_RS09520_m1 |
AAV28_RS09520_m1 |
cluster_199 |
all |
18 |
13.17 |
364 |
+AGTTy-------GAATT |
AATTC-------RAACT+ |
|
|
all_m912_AAV28_RS21965_m2 |
AAV28_RS21965_m2 |
cluster_115 |
all |
10 |
12.48 |
350 |
CTTTAAGCC+ |
+GGCTTAAAG |
|
|
all_m1060_AAV28_RS25155_m5 |
AAV28_RS25155_m5 |
cluster_81 |
all |
23 |
9.03 |
241 |
+++ATA----------wATA+++ |
+++TATW----------TAT+++ |
|
|
all_m278_AAV28_RS08065_m3 |
AAV28_RS08065_m3 |
cluster_132 |
all |
18 |
10.41 |
65 |
CGAr---------TCCC+ |
+GGGA---------YTCG |
|
|
all_m1557_AAV28_RS43455_m2 |
AAV28_RS43455_m2 |
cluster_239 |
all |
16 |
13.55 |
428 |
+ACGGAr---rCCCA+ |
+TGGGY---YTCCGT+ |
|
|
all_m56_AAV28_RS02195_m1 |
AAV28_RS02195_m1 |
cluster_92 |
all |
10 |
13.86 |
135 |
TCGAACAAAT |
ATTTGTTCGA |
|
|
all_m1437_AAV28_RS36110_m2 |
AAV28_RS36110_m2 |
cluster_111 |
all |
20 |
26.37 |
501 |
ATCGAAYYCGGAATTCCGAA |
TTCGGAATTCCGrrTTCGAT |
|
|
all_m463_AAV28_RS12750_m3 |
AAV28_RS12750_m3 |
cluster_178 |
all |
21 |
17.44 |
386 |
+AGTTCCR------GGAACT+ |
+AGTTCC------YGGAACT+ |
|
|
all_m235_AAV28_RS07385_m5 |
AAV28_RS07385_m5 |
cluster_61 |
all |
11 |
12.77 |
526 |
TTAACHATTT+ |
+AAATdGTTAA |
|
|
all_m874_AAV28_RS21115_m4 |
AAV28_RS21115_m4 |
cluster_2 |
all |
19 |
19.41 |
103 |
++++GAATCCTAGGATTC+ |
+GAATCCTAGGATTC++++ |
|
|
all_m1409_AAV28_RS35690_m4 |
AAV28_RS35690_m4 |
cluster_24 |
all |
33 |
36.74 |
660 |
ATAAATATAATATATTAWTTATTTTAT++++++ |
++++++ATAAAATAAwTAATATATTATATTTAT |
|
|
all_m1039_AAV28_RS24730_m4 |
AAV28_RS24730_m4 |
cluster_315 |
all |
15 |
11.85 |
513 |
AGCM------GTGCC |
GGCAC------KGCT |
|
|
all_m653_AAV28_RS16320_m3 |
AAV28_RS16320_m3 |
cluster_1 |
all |
26 |
12.54 |
337 |
++++++++TATW--WTATAT++++++ |
++++++ATATAw--wATA++++++++ |
|
|
all_m55_AAV28_RS02140_m5 |
AAV28_RS02140_m5 |
cluster_56 |
all |
14 |
12.85 |
825 |
CGAGCCy--CCC++ |
++GGG--RGGCTCG |
|
|
all_m162_AAV28_RS04825_m2 |
AAV28_RS04825_m2 |
cluster_20 |
all |
9 |
11.79 |
187 |
TATCyGAAA |
TTTCRGATA |
|
|
all_m422_AAV28_RS11965_m2 |
AAV28_RS11965_m2 |
cluster_1 |
all |
26 |
18.02 |
138 |
++++++GCAATATA----AAATT+++ |
+++AATTT----TATATTGC++++++ |
|
|
all_m65_AAV28_RS02210_m5 |
AAV28_RS02210_m5 |
cluster_235 |
all |
18 |
9.70 |
149 |
++++CCC-------GGCG |
CGCC-------GGG++++ |
|
|
all_m1259_AAV28_RS31130_m4 |
AAV28_RS31130_m4 |
cluster_198 |
all |
24 |
13.86 |
145 |
+AAAAA------------CATAA+ |
+TTATG------------TTTTT+ |
|
|
all_m771_AAV28_RS18275_m1 |
AAV28_RS18275_m1 |
cluster_311 |
all |
14 |
19.41 |
189 |
TTGAACCGGTTCAA |
TTGAACCGGTTCAA |
|
|
all_m1115_AAV28_RS27295_m5 |
AAV28_RS27295_m5 |
cluster_52 |
all |
16 |
11.79 |
226 |
+++++TGACyGCAG++ |
++CTGCRGTCA+++++ |
|
|
all_m1139_AAV28_RS28315_m4 |
AAV28_RS28315_m4 |
cluster_394 |
all |
28 |
38.15 |
576 |
TAATTTTTTCGAAATTATArAAAAAATT |
AATTTTTTYTATAATTTCGAAAAAATTA |
|
|
all_m1132_AAV28_RS28285_m2 |
AAV28_RS28285_m2 |
cluster_8 |
all |
21 |
15.25 |
139 |
+++++CCCCCTCACCC+++++ |
+++++GGGTGAGGGGG+++++ |
|
|
all_m1254_AAV28_RS31045_m4 |
AAV28_RS31045_m4 |
cluster_3 |
all |
16 |
16.64 |
94 |
+++CCCCGGAATGAC+ |
+GTCATTCCGGGG+++ |
|
|
all_m713_AAV28_RS17195_m3 |
AAV28_RS17195_m3 |
cluster_150 |
all |
21 |
12.48 |
119 |
++TCAAA--------TTTT++ |
++AAAA--------TTTGA++ |
|
|
all_m848_AAV28_RS20650_m3 |
AAV28_RS20650_m3 |
cluster_8 |
all |
21 |
19.41 |
254 |
+++CCCTCTCCCCCCCC++++ |
++++GGGGGGGGAGAGGG+++ |
|
|
all_m1396_AAV28_RS34875_m1 |
AAV28_RS34875_m1 |
cluster_27 |
all |
19 |
15.58 |
490 |
+TTGAAH------GTTTCA |
TGAAAC------dTTCAA+ |
|
|
all_m1050_AAV28_RS25120_m5 |
AAV28_RS25120_m5 |
cluster_12 |
all |
14 |
11.09 |
268 |
++++ATATATCA++ |
++TGATATAT++++ |
|
|
all_m488_AAV28_RS13260_m3 |
AAV28_RS13260_m3 |
cluster_38 |
all |
13 |
17.34 |
253 |
GATGCGAmGCATC |
GATGCKTCGCATC |
|
|
all_m1056_AAV28_RS25155_m1 |
AAV28_RS25155_m1 |
cluster_131 |
all |
21 |
17.42 |
249 |
CCAATA--------YTATTGA |
TCAATAR--------TATTGG |
|
|
all_m945_AAV28_RS22700_m5 |
AAV28_RS22700_m5 |
cluster_296 |
all |
11 |
10.44 |
263 |
+AAAA--yCCG |
CGGR--TTTT+ |
|
|
all_m905_AAV28_RS21710_m5 |
AAV28_RS21710_m5 |
cluster_141 |
all |
14 |
18.73 |
199 |
GACGGGCGGGKGTG |
CACmCCCGCCCGTC |
|
|
all_m302_AAV28_RS08695_m2 |
AAV28_RS08695_m2 |
cluster_30 |
all |
17 |
21.08 |
549 |
+CAAAATTGhAAAAAAT |
ATTTTTTDCAATTTTG+ |
|
|
all_m202_AAV28_RS06855_m2 |
AAV28_RS06855_m2 |
cluster_1 |
all |
26 |
17.63 |
949 |
++++++AATATTW-HTATATT+++++ |
+++++AATATAd-wAATATT++++++ |
|
|
all_m563_AAV28_RS14395_m3 |
AAV28_RS14395_m3 |
cluster_143 |
all |
20 |
16.98 |
109 |
+CACGCs------GCGCGTG |
CACGCGC------SGCGTG+ |
|
|
all_m701_AAV28_RS16910_m1 |
AAV28_RS16910_m1 |
cluster_80 |
all |
16 |
18.35 |
512 |
++TATACAAAhAAACA |
TGTTTDTTTGTATA++ |
|
|
all_m1416_AAV28_RS35785_m1 |
AAV28_RS35785_m1 |
cluster_95 |
all |
12 |
13.86 |
286 |
+ATTGTAGCAA+ |
+TTGCTACAAT+ |
|
|
all_m777_AAV28_RS18325_m2 |
AAV28_RS18325_m2 |
cluster_107 |
all |
17 |
23.57 |
350 |
TGCCGCCGGCGGCGGCA |
TGCCGCCGCCGGCGGCA |
|
|
all_m267_AAV28_RS07815_m2 |
AAV28_RS07815_m2 |
cluster_29 |
all |
28 |
14.93 |
266 |
++GCGCGM--------------SCGTGG |
CCACGs--------------kCGCGC++ |
|
|
all_m272_AAV28_RS08060_m2 |
AAV28_RS08060_m2 |
cluster_243 |
all |
12 |
12.48 |
111 |
TGAT---TACAT |
ATGTA---ATCA |
|
|
all_m396_AAV28_RS11695_m1 |
AAV28_RS11695_m1 |
cluster_22 |
all |
18 |
17.51 |
441 |
GATCACG-----GTGATC |
GATCAC-----CGTGATC |
|
|
all_m200_AAV28_RS06565_m5 |
AAV28_RS06565_m5 |
cluster_2 |
all |
19 |
17.33 |
126 |
++++GAATCCMTAGATT++ |
++AATCTAkGGATTC++++ |
|
|
all_m406_AAV28_RS11845_m1 |
AAV28_RS11845_m1 |
cluster_6 |
all |
9 |
9.70 |
350 |
+CAAAATA+ |
+TATTTTG+ |
|
|
all_m1123_AAV28_RS27825_m3 |
AAV28_RS27825_m3 |
cluster_379 |
all |
12 |
16.64 |
103 |
TCCATAAATGGA |
TCCATTTATGGA |
|
|
all_m1083_AAV28_RS25830_m3 |
AAV28_RS25830_m3 |
cluster_270 |
all |
18 |
12.48 |
134 |
+CATTA--------GTCA |
TGAC--------TAATG+ |
|
|
all_m1037_AAV28_RS24730_m2 |
AAV28_RS24730_m2 |
cluster_156 |
all |
19 |
18.80 |
895 |
CTGGCAAr----dTGCCAG |
CTGGCAH----YTTGCCAG |
|
|
all_m611_AAV28_RS15810_m1 |
AAV28_RS15810_m1 |
cluster_31 |
all |
14 |
13.86 |
263 |
++CGGAGGACGA++ |
++TCGTCCTCCG++ |
|
|
all_m21_AAV28_RS01495_m1 |
AAV28_RS01495_m1 |
cluster_33 |
all |
24 |
17.67 |
443 |
++++TTATAAD-----WTATATA+ |
+TATATAw-----hTTATAA++++ |
|
|
all_m379_AAV28_RS10485_m4 |
AAV28_RS10485_m4 |
cluster_142 |
all |
25 |
15.86 |
261 |
GCGAAAv------------bGCGCG |
CGCGCV------------BTTTCGC |
|
|
all_m377_AAV28_RS10485_m2 |
AAV28_RS10485_m2 |
cluster_164 |
all |
15 |
11.80 |
261 |
+++ACGCSCGGC+++ |
+++GCCGsGCGT+++ |
|
|
all_m1486_AAV28_RS38235_m1 |
AAV28_RS38235_m1 |
cluster_260 |
all |
14 |
13.15 |
141 |
+GAAAh--gCTAAA |
TTTAGC--DTTTC+ |
|
|
all_m1151_AAV28_RS28625_m1 |
AAV28_RS28625_m1 |
cluster_1 |
all |
26 |
17.67 |
630 |
+++++ATATATH--WTATATT+++++ |
+++++AATATAw--dATATAT+++++ |
|
|
all_m1421_AAV28_RS36020_m1 |
AAV28_RS36020_m1 |
cluster_21 |
all |
13 |
13.51 |
628 |
++GGAAHYTTTTT |
AAAAArdTTCC++ |
|
|
all_m592_AAV28_RS15195_m2 |
AAV28_RS15195_m2 |
cluster_115 |
all |
10 |
13.86 |
246 |
GGCTTACAGG |
CCTGTAAGCC |
|
|
all_m159_AAV28_RS03835_m4 |
AAV28_RS03835_m4 |
cluster_99 |
all |
14 |
12.61 |
301 |
TTTGK---CAAGC+ |
+GCTTG---mCAAA |
|
|
all_m1218_AAV28_RS30225_m3 |
AAV28_RS30225_m3 |
cluster_282 |
all |
12 |
15.25 |
138 |
TTTGT-GCAGAT |
ATCTGC-ACAAA |
|
|
all_m33_AAV28_RS01755_m3 |
AAV28_RS01755_m3 |
cluster_3 |
all |
16 |
16.64 |
350 |
+++TCCCGGAATGAC+ |
+GTCATTCCGGGA+++ |
|
|
all_m683_AAV28_RS16575_m3 |
AAV28_RS16575_m3 |
cluster_240 |
all |
16 |
13.86 |
115 |
+AATCG----CGATT+ |
+AATCG----CGATT+ |
|
|
all_m144_AAV28_RS03140_m4 |
AAV28_RS03140_m4 |
cluster_211 |
all |
9 |
9.70 |
239 |
+GTGCAAC+ |
+GTTGCAC+ |
|
|
all_m1493_AAV28_RS38375_m3 |
AAV28_RS38375_m3 |
cluster_105 |
all |
19 |
13.56 |
349 |
+GCGAA--------CAACC |
GGTTG--------TTCGC+ |
|
|
all_m1470_AAV28_RS36580_m5 |
AAV28_RS36580_m5 |
cluster_170 |
all |
11 |
9.17 |
224 |
+GTTTGTT+++ |
+++AACAAAC+ |
|
|
all_m533_AAV28_RS14045_m3 |
AAV28_RS14045_m3 |
cluster_18 |
all |
14 |
11.09 |
233 |
+TCCT---GAGC++ |
++GCTC---AGGA+ |
|
|
all_m482_AAV28_RS13115_m2 |
AAV28_RS13115_m2 |
cluster_390 |
all |
18 |
24.95 |
173 |
TTCTTGTATATACAAGAA |
TTCTTGTATATACAAGAA |
|
|
all_m1559_AAV28_RS43455_m4 |
AAV28_RS43455_m4 |
cluster_239 |
all |
16 |
10.10 |
365 |
++CGGA-----cCCC+ |
+GGGG-----TCCG++ |
|
|
all_m1484_AAV28_RS37890_m4 |
AAV28_RS37890_m4 |
cluster_108 |
all |
14 |
15.26 |
100 |
+TTTCS-MCCTCAT |
ATGAGGk-sGAAA+ |
|
|
all_m1362_AAV28_RS33760_m2 |
AAV28_RS33760_m2 |
cluster_257 |
all |
26 |
9.36 |
94 |
AACs------------------wTCC |
GGAW------------------SGTT |
|
|
all_m1454_AAV28_RS36300_m4 |
AAV28_RS36300_m4 |
cluster_52 |
all |
16 |
20.79 |
304 |
CCTGCTGTCAGCAGG+ |
+CCTGCTGACAGCAGG |
|
|
all_m1180_AAV28_RS29015_m5 |
AAV28_RS29015_m5 |
cluster_178 |
all |
21 |
11.09 |
44 |
++CTTC--------GGAA+++ |
+++TTCC--------GAAG++ |
|
|
all_m492_AAV28_RS13450_m2 |
AAV28_RS13450_m2 |
cluster_269 |
all |
17 |
18.02 |
350 |
TGCGGGAGCGAGA++++ |
++++TCTCGCTCCCGCA |
|
|
all_m253_AAV28_RS07505_m3 |
AAV28_RS07505_m3 |
cluster_206 |
all |
16 |
20.79 |
350 |
TCCCCCAAAGGGGGA+ |
+TCCCCCTTTGGGGGA |
|
|
all_m380_AAV28_RS10485_m5 |
AAV28_RS10485_m5 |
cluster_141 |
all |
14 |
15.25 |
152 |
ACGCGCCCGTC+++ |
+++GACGGGCGCGT |
|
|
all_m1303_AAV28_RS32075_m3 |
AAV28_RS32075_m3 |
cluster_383 |
all |
24 |
13.86 |
38 |
TCAGCG--------------ACTC |
GAGT--------------CGCTGA |
|
|
all_m1411_AAV28_RS35710_m1 |
AAV28_RS35710_m1 |
cluster_218 |
all |
11 |
15.25 |
228 |
CGAAGCCTTCG |
CGAAGGCTTCG |
|
|
all_m684_AAV28_RS16575_m4 |
AAV28_RS16575_m4 |
cluster_213 |
all |
8 |
9.70 |
105 |
GATT-GAT |
ATC-AATC |
|
|
all_m1376_AAV28_RS33965_m1 |
AAV28_RS33965_m1 |
cluster_153 |
all |
12 |
15.55 |
207 |
TGTCGCVTGTTC |
GAACAbGCGACA |
|
|
all_m1108_AAV28_RS26305_m3 |
AAV28_RS26305_m3 |
cluster_289 |
all |
17 |
13.19 |
350 |
GGCM------GGGCAA+ |
+TTGCCC------kGCC |
|
|
all_m708_AAV28_RS17165_m3 |
AAV28_RS17165_m3 |
cluster_3 |
all |
16 |
18.02 |
242 |
GCGCCCCGGAATG+++ |
+++CATTCCGGGGCGC |
|
|
all_m679_AAV28_RS16560_m4 |
AAV28_RS16560_m4 |
cluster_81 |
all |
23 |
8.32 |
103 |
TAT---------------TAT++ |
++ATA---------------ATA |
|
|
all_m1496_AAV28_RS38785_m1 |
AAV28_RS38785_m1 |
cluster_122 |
all |
16 |
22.18 |
119 |
TGGAACGATCGTTCCA |
TGGAACGATCGTTCCA |
|
|
all_m745_AAV28_RS17805_m5 |
AAV28_RS17805_m5 |
cluster_370 |
all |
15 |
11.09 |
14 |
CGGT-------AACA |
TGTT-------ACCG |
|
|
all_m519_AAV28_RS13850_m4 |
AAV28_RS13850_m4 |
cluster_234 |
all |
18 |
14.64 |
123 |
TTTGTC-------RCAAA |
TTTGY-------GACAAA |
|
|
all_m774_AAV28_RS18275_m4 |
AAV28_RS18275_m4 |
cluster_311 |
all |
14 |
15.25 |
189 |
TTGAACCGGCG+++ |
+++CGCCGGTTCAA |
|
|
all_m782_AAV28_RS18380_m2 |
AAV28_RS18380_m2 |
cluster_292 |
all |
15 |
13.86 |
306 |
CTCGC-----CGTCG |
CGACG-----GCGAG |
|
|
all_m987_AAV28_RS23295_m2 |
AAV28_RS23295_m2 |
cluster_212 |
all |
21 |
15.25 |
45 |
+TCGCCG---------CGACG |
CGTCG---------CGGCGA+ |
|
|
all_m310_AAV28_RS08955_m5 |
AAV28_RS08955_m5 |
cluster_12 |
all |
14 |
8.32 |
157 |
++++++ATATCT++ |
++AGATAT++++++ |
|
|
all_m789_AAV28_RS18390_m4 |
AAV28_RS18390_m4 |
cluster_65 |
all |
15 |
13.17 |
81 |
ACGTA---wACAT++ |
++ATGTW---TACGT |
|
|
all_m462_AAV28_RS12750_m2 |
AAV28_RS12750_m2 |
cluster_178 |
all |
21 |
15.96 |
438 |
+AGTTy--------GGAACCT |
AGGTTCC--------RAACT+ |
|
|
all_m1489_AAV28_RS38235_m4 |
AAV28_RS38235_m4 |
cluster_296 |
all |
11 |
9.70 |
57 |
CAAA----CCA |
TGG----TTTG |
|
|
all_m31_AAV28_RS01755_m1 |
AAV28_RS01755_m1 |
cluster_3 |
all |
16 |
19.41 |
350 |
+CGCCCCGGAATGAC+ |
+GTCATTCCGGGGCG+ |
|
|
all_m157_AAV28_RS03835_m2 |
AAV28_RS03835_m2 |
cluster_99 |
all |
14 |
14.57 |
368 |
GTTTGk--mCAAAC |
GTTTGK--MCAAAC |
|
|
all_m412_AAV28_RS11895_m2 |
AAV28_RS11895_m2 |
cluster_1 |
all |
26 |
14.89 |
820 |
++++++AATATTD---WTATT+++++ |
+++++AATAw---hAATATT++++++ |
|
|
all_m45_AAV28_RS02065_m5 |
AAV28_RS02065_m5 |
cluster_50 |
all |
17 |
14.58 |
268 |
TATTr------ACAATA |
TATTGT------YAATA |
|
|
all_m164_AAV28_RS04825_m4 |
AAV28_RS04825_m4 |
cluster_36 |
all |
11 |
12.48 |
155 |
+GGATTATCC+ |
+GGATAATCC+ |
|
|
all_m805_AAV28_RS18940_m5 |
AAV28_RS18940_m5 |
cluster_3 |
all |
16 |
13.86 |
350 |
++AACCCGGAAT++++ |
++++ATTCCGGGTT++ |
|
|
all_m784_AAV28_RS18380_m4 |
AAV28_RS18380_m4 |
cluster_184 |
all |
10 |
13.86 |
202 |
GCGCGACGAG |
CTCGTCGCGC |
|
|
all_m300_AAV28_RS08640_m5 |
AAV28_RS08640_m5 |
cluster_149 |
all |
27 |
11.80 |
62 |
+CGGAk----------------CGAA+ |
+TTCG----------------MTCCG+ |
|
|
all_m740_AAV28_RS17775_m5 |
AAV28_RS17775_m5 |
cluster_39 |
all |
10 |
9.70 |
56 |
GATGGGT+++ |
+++ACCCATC |
|
|
all_m678_AAV28_RS16560_m3 |
AAV28_RS16560_m3 |
cluster_308 |
all |
16 |
15.25 |
111 |
TCTGA-----GTCAGG |
CCTGAC-----TCAGA |
|
|
all_m704_AAV28_RS16910_m4 |
AAV28_RS16910_m4 |
cluster_80 |
all |
16 |
16.64 |
216 |
++TTTATATATAAA++ |
++TTTATATATAAA++ |
|
|
all_m635_AAV28_RS16085_m5 |
AAV28_RS16085_m5 |
cluster_136 |
all |
11 |
9.70 |
277 |
+GTTG-CAA++ |
++TTG-CAAC+ |
|
|
all_m80_AAV28_RS02325_m5 |
AAV28_RS02325_m5 |
cluster_166 |
all |
12 |
13.18 |
160 |
GACTTC--rAGC |
GCTY--GAAGTC |
|
|
all_m1461_AAV28_RS36460_m1 |
AAV28_RS36460_m1 |
cluster_217 |
all |
21 |
19.51 |
672 |
+++++ATATTTCsGAAATAT+ |
+ATATTTCSGAAATAT+++++ |
|
|
all_m334_AAV28_RS09645_m4 |
AAV28_RS09645_m4 |
cluster_244 |
all |
10 |
11.09 |
56 |
+TGGGGTAC+ |
+GTACCCCA+ |
|
|
all_m1422_AAV28_RS36020_m2 |
AAV28_RS36020_m2 |
cluster_37 |
all |
27 |
14.50 |
588 |
GGAACs---------------sGTTCC |
GGAACS---------------SGTTCC |
|
|
all_m1503_AAV28_RS39075_m3 |
AAV28_RS39075_m3 |
cluster_125 |
all |
14 |
18.12 |
438 |
CTTTTCGcGAAAAG |
CTTTTCGCGAAAAG |
|
|
all_m449_AAV28_RS12315_m4 |
AAV28_RS12315_m4 |
cluster_144 |
all |
25 |
27.73 |
254 |
+++++ATGGCATGCCAAATGCCAGA |
TCTGGCATTTGGCATGCCAT+++++ |
|
|
all_m1149_AAV28_RS28390_m4 |
AAV28_RS28390_m4 |
cluster_33 |
all |
24 |
23.58 |
506 |
AAATATATD-----WTATATATAT |
ATATATATAw-----hATATATTT |
|
|
all_m888_AAV28_RS21410_m3 |
AAV28_RS21410_m3 |
cluster_43 |
all |
29 |
11.09 |
71 |
+TTCG------------------TTAC++ |
++GTAA------------------CGAA+ |
|
|
all_m193_AAV28_RS06460_m3 |
AAV28_RS06460_m3 |
cluster_1 |
all |
26 |
9.70 |
192 |
+++++++++ATA---TATA+++++++ |
+++++++TATA---TAT+++++++++ |
|
|
all_m351_AAV28_RS10310_m1 |
AAV28_RS10310_m1 |
cluster_210 |
all |
11 |
12.83 |
681 |
+CCCTTaAGAG |
CTCTTAAGGG+ |
|
|
all_m1011_AAV28_RS24325_m1 |
AAV28_RS24325_m1 |
cluster_1 |
all |
26 |
13.93 |
1023 |
++++++AATATW---WATATT+++++ |
+++++AATATw---wATATT++++++ |
|
|
all_m932_AAV28_RS22385_m2 |
AAV28_RS22385_m2 |
cluster_116 |
all |
27 |
9.86 |
308 |
GCGR------------------ATTG+ |
+CAAT------------------yCGC |
|
|
all_m961_AAV28_RS23085_m1 |
AAV28_RS23085_m1 |
cluster_1 |
all |
26 |
13.86 |
206 |
+++++++TTATA----ATATT+++++ |
+++++AATAT----TATAA+++++++ |
|
|
all_m735_AAV28_RS17680_m5 |
AAV28_RS17680_m5 |
cluster_359 |
all |
9 |
10.43 |
175 |
ACGm-GATG |
CATC-KCGT |
|
|
all_m829_AAV28_RS19675_m4 |
AAV28_RS19675_m4 |
cluster_112 |
all |
25 |
11.09 |
43 |
+ATGC--------------GATC++ |
++GATC--------------GCAT+ |
|
|
all_m1481_AAV28_RS37890_m1 |
AAV28_RS37890_m1 |
cluster_233 |
all |
12 |
13.86 |
148 |
++CTGCTCGCCG |
CGGCGAGCAG++ |
|
|
all_m1444_AAV28_RS36200_m4 |
AAV28_RS36200_m4 |
cluster_1 |
all |
26 |
30.50 |
350 |
++++ATTTTATATTATATATAATTAT |
ATAATTATATATAATATAAAAT++++ |
|
|
all_m866_AAV28_RS20945_m1 |
AAV28_RS20945_m1 |
cluster_80 |
all |
16 |
11.09 |
185 |
++TTTW-WTAAT++++ |
++++ATTAw-wAAA++ |
|
|
all_m1353_AAV28_RS33490_m3 |
AAV28_RS33490_m3 |
cluster_82 |
all |
22 |
13.86 |
135 |
++++CGCA--------GAGGAG |
CTCCTC--------TGCG++++ |
|
|
all_m282_AAV28_RS08105_m2 |
AAV28_RS08105_m2 |
cluster_165 |
all |
12 |
16.64 |
274 |
TTAAATTCGCGT |
ACGCGAATTTAA |
|
|
all_m842_AAV28_RS20595_m2 |
AAV28_RS20595_m2 |
cluster_101 |
all |
26 |
13.52 |
309 |
++CGGCY-----------RGCGGC++ |
++GCCGCy-----------rGCCG++ |
|
|
all_m1480_AAV28_RS37720_m5 |
AAV28_RS37720_m5 |
cluster_1 |
all |
26 |
18.44 |
127 |
++++++++CTATAGTGTATATT++++ |
++++AATATACACTaTAG++++++++ |
|
|
all_m1312_AAV28_RS32185_m2 |
AAV28_RS32185_m2 |
cluster_94 |
all |
10 |
13.86 |
143 |
GCGTTCGATG |
CATCGAACGC |
|
|
all_m176_AAV28_RS05935_m1 |
AAV28_RS05935_m1 |
cluster_161 |
all |
20 |
13.65 |
215 |
TCTCTC---------MGGCA |
TGCCk---------GAGAGA |
|
|
all_m146_AAV28_RS03560_m1 |
AAV28_RS03560_m1 |
cluster_201 |
all |
20 |
13.92 |
730 |
++ACCCCA------KGGGTG |
CACCCm------tGGGGT++ |
|
|
all_m74_AAV28_RS02270_m4 |
AAV28_RS02270_m4 |
cluster_132 |
all |
18 |
9.70 |
181 |
+TGG----------CCTC |
GAGG----------CCA+ |
|
|
all_m1399_AAV28_RS34875_m4 |
AAV28_RS34875_m4 |
cluster_27 |
all |
19 |
25.26 |
506 |
TTGAAAATAdAAATTTCAA |
TTGAAATTTHTATTTTCAA |
|
|
all_m666_AAV28_RS16510_m1 |
AAV28_RS16510_m1 |
cluster_34 |
all |
23 |
15.06 |
497 |
+++CGATCG-gCGATC+++++++ |
+++++++GATCGC-CGATCG+++ |
|
|
all_m1003_AAV28_RS23660_m3 |
AAV28_RS23660_m3 |
cluster_182 |
all |
11 |
8.32 |
65 |
+++TGG-TAC+ |
+GTA-CCA+++ |
|
|
all_m660_AAV28_RS16380_m5 |
AAV28_RS16380_m5 |
cluster_100 |
all |
26 |
8.32 |
45 |
CTG-------------------TCG+ |
+CGA-------------------CAG |
|
|
all_m250_AAV28_RS07470_m5 |
AAV28_RS07470_m5 |
cluster_77 |
all |
12 |
15.25 |
215 |
GCTCCGTTTTT+ |
+AAAAACGGAGC |
|
|
all_m1336_AAV28_RS33255_m1 |
AAV28_RS33255_m1 |
cluster_339 |
all |
9 |
11.09 |
127 |
+CAATCCTT |
AAGGATTG+ |
|
|
all_m1370_AAV28_RS33795_m5 |
AAV28_RS33795_m5 |
cluster_302 |
all |
9 |
11.09 |
125 |
AAAG-GCGG |
CCGC-CTTT |
|
|
all_m26_AAV28_RS01725_m1 |
AAV28_RS01725_m1 |
cluster_71 |
all |
19 |
15.25 |
350 |
+CCGCCG-------CCGCA |
TGCGG-------CGGCGG+ |
|
|
all_m1033_AAV28_RS24605_m3 |
AAV28_RS24605_m3 |
cluster_139 |
all |
27 |
12.48 |
52 |
++ATCG----------------CTAAA |
TTTAG----------------CGAT++ |
|
|
all_m43_AAV28_RS02065_m3 |
AAV28_RS02065_m3 |
cluster_232 |
all |
12 |
15.25 |
143 |
ACAACAATTAT+ |
+ATAATTGTTGT |
|
|
all_m1323_AAV28_RS32435_m3 |
AAV28_RS32435_m3 |
cluster_118 |
all |
28 |
14.59 |
560 |
+CGCCGG---------------sGCCC+ |
+GGGCS---------------CCGGCG+ |
|
|
all_m568_AAV28_RS14600_m3 |
AAV28_RS14600_m3 |
cluster_317 |
all |
15 |
17.67 |
314 |
CAACr-mAAGCGAAG |
CTTCGCTTK-YGTTG |
|
|
all_m296_AAV28_RS08640_m1 |
AAV28_RS08640_m1 |
cluster_82 |
all |
22 |
13.90 |
86 |
+CGGCGM---------SAAGA+ |
+TCTTs---------kCGCCG+ |
|
|
all_m456_AAV28_RS12655_m1 |
AAV28_RS12655_m1 |
cluster_314 |
all |
12 |
12.48 |
144 |
CGTCCAAAA+++ |
+++TTTTGGACG |
|
|
all_m595_AAV28_RS15195_m5 |
AAV28_RS15195_m5 |
cluster_193 |
all |
11 |
15.25 |
208 |
GCCTGACAGGC |
GCCTGTCAGGC |
|
|
all_m1456_AAV28_RS36350_m1 |
AAV28_RS36350_m1 |
cluster_26 |
all |
21 |
12.48 |
156 |
ACCTG------------AGGT |
ACCT------------CAGGT |
|
|
all_m289_AAV28_RS08150_m4 |
AAV28_RS08150_m4 |
cluster_239 |
all |
16 |
13.86 |
156 |
+++CTGGA---GCTCC |
GGAGC---TCCAG+++ |
|
|
all_m444_AAV28_RS12170_m4 |
AAV28_RS12170_m4 |
cluster_284 |
all |
10 |
8.32 |
350 |
++CCC-CGG+ |
+CCG-GGG++ |
|
|
all_m191_AAV28_RS06460_m1 |
AAV28_RS06460_m1 |
cluster_265 |
all |
13 |
16.64 |
350 |
+AAATATACGCGA |
TCGCGTATATTT+ |
|
|
all_m1494_AAV28_RS38375_m4 |
AAV28_RS38375_m4 |
cluster_105 |
all |
19 |
12.48 |
317 |
AACGA---------CAAA+ |
+TTTG---------TCGTT |
|
|
all_m820_AAV28_RS19540_m5 |
AAV28_RS19540_m5 |
cluster_192 |
all |
15 |
11.09 |
73 |
+++AAAAT---GCA+ |
+TGC---ATTTT+++ |
|
|
all_m1067_AAV28_RS25485_m2 |
AAV28_RS25485_m2 |
cluster_373 |
all |
14 |
19.41 |
100 |
GCAATATAGTGCCT |
AGGCACTATATTGC |
|
|
all_m1297_AAV28_RS32005_m2 |
AAV28_RS32005_m2 |
cluster_167 |
all |
24 |
13.86 |
144 |
+CGCGCG-----------AGGA++ |
++TCCT-----------CGCGCG+ |
|
|
all_m1210_AAV28_RS29730_m5 |
AAV28_RS29730_m5 |
cluster_104 |
all |
18 |
11.93 |
460 |
CTCTC-------GAGC++ |
++GCTC-------GAGAG |
|
|
all_m1174_AAV28_RS28985_m4 |
AAV28_RS28985_m4 |
cluster_214 |
all |
30 |
20.41 |
587 |
+++CTCCCb-----------rGGGAGGGAG |
CTCCCTCCCY-----------VGGGAG+++ |
|
|
all_m448_AAV28_RS12315_m3 |
AAV28_RS12315_m3 |
cluster_374 |
all |
15 |
20.79 |
254 |
GCTTGACATGCCAAA |
TTTGGCATGTCAAGC |
|
|
all_m1428_AAV28_RS36070_m3 |
AAV28_RS36070_m3 |
cluster_293 |
all |
9 |
9.70 |
121 |
AAATCCG++ |
++CGGATTT |
|
|
all_m1049_AAV28_RS25120_m4 |
AAV28_RS25120_m4 |
cluster_80 |
all |
16 |
10.00 |
464 |
++TCTAdATA++++++ |
++++++TATHTAGA++ |
|
|
all_m363_AAV28_RS10400_m3 |
AAV28_RS10400_m3 |
cluster_203 |
all |
16 |
13.24 |
238 |
+TGGCS-----CTATC |
GATAG-----SGCCA+ |
|
|
all_m315_AAV28_RS09095_m5 |
AAV28_RS09095_m5 |
cluster_152 |
all |
19 |
26.34 |
221 |
AATGCAAGTAACTTGCATT |
AATGCAAGTTACTTGCATT |
|
|
all_m1281_AAV28_RS31565_m1 |
AAV28_RS31565_m1 |
cluster_8 |
all |
21 |
15.95 |
117 |
+++++CTCCCTCsCCCC++++ |
++++GGGGSGAGGGAG+++++ |
|
|
all_m514_AAV28_RS13725_m4 |
AAV28_RS13725_m4 |
cluster_125 |
all |
14 |
11.22 |
687 |
+CTTy--AAAAA++ |
++TTTTT--RAAG+ |
|
|
all_m1439_AAV28_RS36110_m4 |
AAV28_RS36110_m4 |
cluster_277 |
all |
16 |
9.70 |
350 |
++GAA-----AATC++ |
++GATT-----TTC++ |
|
|
all_m197_AAV28_RS06565_m2 |
AAV28_RS06565_m2 |
cluster_2 |
all |
19 |
18.10 |
390 |
++++GAATCTCkAGATTC+ |
+GAATCTMGAGATTC++++ |
|
|
all_m823_AAV28_RS19565_m3 |
AAV28_RS19565_m3 |
cluster_148 |
all |
14 |
19.41 |
155 |
TCGAGCGCGCTCTA |
TAGAGCGCGCTCGA |
|
|
all_m1090_AAV28_RS25875_m5 |
AAV28_RS25875_m5 |
cluster_61 |
all |
11 |
8.65 |
557 |
+AATHTTT+++ |
+++AAAdATT+ |
|
|
all_m136_AAV28_RS03080_m1 |
AAV28_RS03080_m1 |
cluster_210 |
all |
11 |
11.09 |
173 |
+CCCTCAAC++ |
++GTTGAGGG+ |
|
|
all_m1128_AAV28_RS27990_m3 |
AAV28_RS27990_m3 |
cluster_178 |
all |
21 |
16.75 |
276 |
++CTTTS-----RGGGAACT+ |
+AGTTCCCy-----SAAAG++ |
|
|
all_m551_AAV28_RS14265_m1 |
AAV28_RS14265_m1 |
cluster_1 |
all |
26 |
25.65 |
700 |
+AAAATAATATAwATTATAT++++++ |
++++++ATATAATWTATATTATTTT+ |
|
|
all_m897_AAV28_RS21665_m2 |
AAV28_RS21665_m2 |
cluster_272 |
all |
31 |
37.43 |
350 |
++ATATTATTAAATAAATATATTATATCT++ |
++AGATATAATATATTTATTTAATAATAT++ |
|
|
all_m142_AAV28_RS03140_m2 |
AAV28_RS03140_m2 |
cluster_44 |
all |
18 |
23.57 |
239 |
+CAGTGCAAAATTGCACC |
GGTGCAATTTTGCACTG+ |
|
|
all_m861_AAV28_RS20795_m1 |
AAV28_RS20795_m1 |
cluster_103 |
all |
18 |
12.48 |
168 |
+++GAGC----GCGCG++ |
++CGCGC----GCTC+++ |
|
|
all_m1330_AAV28_RS32510_m5 |
AAV28_RS32510_m5 |
cluster_45 |
all |
19 |
9.70 |
80 |
++ATAT---------AAA+ |
+TTT---------ATAT++ |
|
|
all_m15_AAV28_RS01290_m5 |
AAV28_RS01290_m5 |
cluster_129 |
all |
27 |
14.25 |
477 |
CCAAm----------------GGGGGG |
CCCCCC----------------KTTGG |
|
|
all_m345_AAV28_RS09975_m5 |
AAV28_RS09975_m5 |
cluster_157 |
all |
18 |
12.48 |
230 |
+GCAAG--------TCAC |
GTGA--------CTTGC+ |
|
|
all_m220_AAV28_RS07210_m5 |
AAV28_RS07210_m5 |
cluster_170 |
all |
11 |
12.48 |
238 |
CGTTCGTCG++ |
++CGACGAACG |
|
|
all_m651_AAV28_RS16320_m1 |
AAV28_RS16320_m1 |
cluster_81 |
all |
23 |
13.19 |
461 |
TATAw-----------AATAT++ |
++ATATT-----------WTATA |
|
|
all_m403_AAV28_RS11715_m3 |
AAV28_RS11715_m3 |
cluster_85 |
all |
21 |
15.60 |
250 |
+GTGTGK-------CCCACA+ |
+TGTGGG-------mCACAC+ |
|
|
all_m856_AAV28_RS20735_m1 |
AAV28_RS20735_m1 |
cluster_246 |
all |
12 |
13.90 |
928 |
+GTTGCsGCAAC |
GTTGCSGCAAC+ |
|
|
all_m22_AAV28_RS01495_m2 |
AAV28_RS01495_m2 |
cluster_130 |
all |
18 |
11.82 |
265 |
++++ATAw-CATAT++++ |
++++ATATG-WTAT++++ |
|
|
all_m1413_AAV28_RS35710_m3 |
AAV28_RS35710_m3 |
cluster_218 |
all |
11 |
14.59 |
358 |
CTCAGSCTTCG |
CGAAGsCTGAG |
|
|
all_m534_AAV28_RS14045_m4 |
AAV28_RS14045_m4 |
cluster_18 |
all |
14 |
19.41 |
233 |
ATCTCGGAAGGATT |
AATCCTTCCGAGAT |
|
|
all_m1304_AAV28_RS32075_m4 |
AAV28_RS32075_m4 |
cluster_64 |
all |
11 |
11.94 |
87 |
TCTAACCGT++ |
++ACGGTTAGA |
|
|
all_m520_AAV28_RS13850_m5 |
AAV28_RS13850_m5 |
cluster_110 |
all |
17 |
11.09 |
69 |
TTCG-------CACT++ |
++AGTG-------CGAA |
|
|
all_m984_AAV28_RS23240_m4 |
AAV28_RS23240_m4 |
cluster_326 |
all |
22 |
30.50 |
350 |
ATAAATAAATTAACTAATTTAT |
ATAAATTAGTTAATTTATTTAT |
|
|
all_m663_AAV28_RS16470_m3 |
AAV28_RS16470_m3 |
cluster_274 |
all |
17 |
22.18 |
169 |
+CGCGGTGCGCACCGCG |
CGCGGTGCGCACCGCG+ |
|
|
all_m1098_AAV28_RS26100_m3 |
AAV28_RS26100_m3 |
cluster_256 |
all |
12 |
10.40 |
177 |
+++AGTwTCTA+ |
+TAGAWACT+++ |
|
|
all_m1089_AAV28_RS25875_m4 |
AAV28_RS25875_m4 |
cluster_45 |
all |
19 |
11.09 |
152 |
+AATA----------AAAA |
TTTT----------TATT+ |
|
|
all_m1173_AAV28_RS28985_m3 |
AAV28_RS28985_m3 |
cluster_8 |
all |
21 |
12.48 |
235 |
+++++++CCCTCCCCC+++++ |
+++++GGGGGAGGG+++++++ |
|
|
all_m1569_AAV28_RS45505_m4 |
AAV28_RS45505_m4 |
cluster_140 |
all |
16 |
13.88 |
348 |
+GGGGS---SGCGGG+ |
+CCCGCs---sCCCC+ |
|
|
all_m184_AAV28_RS06055_m4 |
AAV28_RS06055_m4 |
cluster_11 |
all |
16 |
11.12 |
650 |
++AAAAA---bTTG++ |
++CAAV---TTTTT++ |
|
|
all_m615_AAV28_RS15810_m5 |
AAV28_RS15810_m5 |
cluster_213 |
all |
8 |
8.32 |
121 |
+TTC-CAT |
ATG-GAA+ |
|
|
all_m527_AAV28_RS13860_m2 |
AAV28_RS13860_m2 |
cluster_187 |
all |
17 |
18.02 |
159 |
+TTGTCCTT-GGGGG++ |
++CCCCC-AAGGACAA+ |
|
|
all_m627_AAV28_RS15910_m2 |
AAV28_RS15910_m2 |
cluster_52 |
all |
16 |
13.86 |
222 |
+++CATGACAGCA+++ |
+++TGCTGTCATG+++ |
|
|
all_m415_AAV28_RS11895_m5 |
AAV28_RS11895_m5 |
cluster_12 |
all |
14 |
8.32 |
240 |
++++++ATATCA++ |
++TGATAT++++++ |
|
|
all_m369_AAV28_RS10450_m4 |
AAV28_RS10450_m4 |
cluster_194 |
all |
19 |
18.76 |
196 |
+++TCTCTTY--CGCTGTT |
AACAGCG--rAAGAGA+++ |
|
|
all_m659_AAV28_RS16380_m4 |
AAV28_RS16380_m4 |
cluster_55 |
all |
17 |
13.19 |
68 |
GATCCY-------ATCG |
CGAT-------rGGATC |
|
|
all_m1170_AAV28_RS28920_m5 |
AAV28_RS28920_m5 |
cluster_45 |
all |
19 |
8.32 |
244 |
+++TAT--------TAT++ |
++ATA--------ATA+++ |
|
|
all_m1440_AAV28_RS36110_m5 |
AAV28_RS36110_m5 |
cluster_3 |
all |
16 |
11.09 |
350 |
+++++CCGGAATC+++ |
+++GATTCCGG+++++ |
|
|
all_m1427_AAV28_RS36070_m2 |
AAV28_RS36070_m2 |
cluster_271 |
all |
22 |
30.50 |
181 |
CACCCCTCCCCCCCCCCAACCC |
GGGTTGGGGGGGGGGAGGGGTG |
|
|
all_m1100_AAV28_RS26100_m5 |
AAV28_RS26100_m5 |
cluster_150 |
all |
21 |
9.70 |
77 |
+++++AAG-------TTTT++ |
++AAAA-------CTT+++++ |
|
|
all_m1373_AAV28_RS33845_m3 |
AAV28_RS33845_m3 |
cluster_119 |
all |
20 |
22.18 |
115 |
++++AACCAATTGGTTGCAT |
ATGCAACCAATTGGTT++++ |
|
|
all_m477_AAV28_RS13025_m2 |
AAV28_RS13025_m2 |
cluster_361 |
all |
16 |
11.79 |
146 |
CAAr-------GGTCA |
TGACC-------YTTG |
|
|
all_m388_AAV28_RS11580_m3 |
AAV28_RS11580_m3 |
cluster_227 |
all |
27 |
27.73 |
350 |
++++++CGGGGCCGGCCGGGCCGGGG+ |
+CCCCGGCCCGGCCGGCCCCG++++++ |
|
|
all_m130_AAV28_RS02970_m5 |
AAV28_RS02970_m5 |
cluster_22 |
all |
18 |
16.72 |
423 |
CATGACr-----RTGACA |
TGTCAY-----YGTCATG |
|
|
all_m247_AAV28_RS07470_m2 |
AAV28_RS07470_m2 |
cluster_77 |
all |
12 |
16.64 |
203 |
AAAAGCGGAGGC |
GCCTCCGCTTTT |
|
|
all_m1560_AAV28_RS43455_m5 |
AAV28_RS43455_m5 |
cluster_239 |
all |
16 |
13.86 |
228 |
GACGG----AGCCC++ |
++GGGCT----CCGTC |
|
|
all_m1397_AAV28_RS34875_m2 |
AAV28_RS34875_m2 |
cluster_27 |
all |
19 |
23.58 |
357 |
TTGAAAAw-rAAATTTCAA |
TTGAAATTTY-WTTTTCAA |
|
|
all_m506_AAV28_RS13620_m1 |
AAV28_RS13620_m1 |
cluster_186 |
all |
21 |
23.57 |
187 |
++++TCCGATTTAATCGGAAA |
TTTCCGATTAAATCGGA++++ |
|
|
all_m19_AAV28_RS01355_m4 |
AAV28_RS01355_m4 |
cluster_79 |
all |
28 |
10.19 |
545 |
TTTG------------------GCCA++ |
++TGGC------------------cAAA |
|
|
all_m308_AAV28_RS08955_m3 |
AAV28_RS08955_m3 |
cluster_81 |
all |
23 |
9.01 |
339 |
GATM--------------TAT++ |
++ATA--------------kATC |
|
|
all_m1082_AAV28_RS25830_m2 |
AAV28_RS25830_m2 |
cluster_10 |
all |
21 |
12.48 |
147 |
+GATTA--------GTAA+++ |
+++TTAC--------TAATC+ |
|
|
all_m951_AAV28_RS22935_m1 |
AAV28_RS22935_m1 |
cluster_261 |
all |
24 |
14.50 |
361 |
GCCGCb------------mACCTG |
CAGGTK------------VGCGGC |
|
|
all_m1524_AAV28_RS40230_m4 |
AAV28_RS40230_m4 |
cluster_66 |
all |
11 |
13.86 |
136 |
+GGGACGGCTA |
TAGCCGTCCC+ |
|
|
all_m1061_AAV28_RS25280_m1 |
AAV28_RS25280_m1 |
cluster_59 |
all |
16 |
13.86 |
350 |
+++TGGTTAACCA+++ |
+++TGGTTAACCA+++ |
|
|
all_m1217_AAV28_RS30225_m2 |
AAV28_RS30225_m2 |
cluster_134 |
all |
22 |
20.16 |
220 |
TCCCGAAACr------AACAA+ |
+TTGTT------YGTTTCGGGA |
|
|
all_m1250_AAV28_RS30740_m5 |
AAV28_RS30740_m5 |
cluster_163 |
all |
20 |
16.66 |
521 |
CCATAGC-------YTATGG |
CCATAr-------GCTATGG |
|
|
all_m768_AAV28_RS18050_m3 |
AAV28_RS18050_m3 |
cluster_11 |
all |
16 |
10.49 |
368 |
+++AAAM----TTTC+ |
+GAAA----KTTT+++ |
|
|
all_m44_AAV28_RS02065_m4 |
AAV28_RS02065_m4 |
cluster_65 |
all |
15 |
10.40 |
223 |
TGT----RACGA+++ |
+++TCGTy----ACA |
|
|
all_m1365_AAV28_RS33760_m5 |
AAV28_RS33760_m5 |
cluster_250 |
all |
25 |
9.15 |
88 |
++ATT---------------ACAA+ |
+TTGT---------------AAT++ |
|
|
all_m178_AAV28_RS05935_m3 |
AAV28_RS05935_m3 |
cluster_16 |
all |
23 |
12.06 |
243 |
CTTCT-----------GGCT+++ |
+++AGCC-----------AGAAG |
|
|
all_m1120_AAV28_RS27630_m5 |
AAV28_RS27630_m5 |
cluster_349 |
all |
21 |
12.48 |
54 |
CTCTC------------TGTC |
GACA------------GAGAG |
|
|
all_m887_AAV28_RS21410_m2 |
AAV28_RS21410_m2 |
cluster_43 |
all |
29 |
16.64 |
79 |
+ATTTCG----------------GTTTTC |
GAAAAC----------------CGAAAT+ |
|
|
all_m1256_AAV28_RS31130_m1 |
AAV28_RS31130_m1 |
cluster_215 |
all |
17 |
18.06 |
590 |
AAAAArmCCTCTTTA++ |
++TAAAGAGGKYTTTTT |
|
|
all_m589_AAV28_RS14965_m4 |
AAV28_RS14965_m4 |
cluster_97 |
all |
10 |
13.86 |
241 |
GAGTTGGACA |
TGTCCAACTC |
|
|
all_m891_AAV28_RS21550_m1 |
AAV28_RS21550_m1 |
cluster_136 |
all |
11 |
13.87 |
470 |
TTCTGwCAGAA |
TTCTGWCAGAA |
|
|
all_m1130_AAV28_RS27990_m5 |
AAV28_RS27990_m5 |
cluster_187 |
all |
17 |
9.02 |
195 |
++CCC-------mAAA+ |
+TTTK-------GGG++ |
|
|
all_m1077_AAV28_RS25790_m2 |
AAV28_RS25790_m2 |
cluster_249 |
all |
26 |
18.73 |
1253 |
AAATATATW-RAATAT++++++++++ |
++++++++++ATATTy-wATATATTT |
|
|
all_m894_AAV28_RS21550_m4 |
AAV28_RS21550_m4 |
cluster_52 |
all |
16 |
11.09 |
185 |
++++CTG-CAGCA+++ |
+++TGCTG-CAG++++ |
|
|
all_m1065_AAV28_RS25280_m5 |
AAV28_RS25280_m5 |
cluster_10 |
all |
21 |
8.36 |
838 |
++++AAAs------TTA++++ |
++++TAA------STTT++++ |
|
|
all_m857_AAV28_RS20735_m2 |
AAV28_RS20735_m2 |
cluster_389 |
all |
22 |
29.81 |
377 |
CCGCATTGCTGCmGCAATGCGG |
CCGCATTGCKGCAGCAATGCGG |
|
|
all_m324_AAV28_RS09370_m4 |
AAV28_RS09370_m4 |
cluster_299 |
all |
15 |
15.25 |
290 |
++++AATAAAATTTC |
GAAATTTTATT++++ |
|
|
all_m316_AAV28_RS09240_m1 |
AAV28_RS09240_m1 |
cluster_106 |
all |
30 |
12.48 |
141 |
+++GATGC-----------------TCCC+ |
+GGGA-----------------GCATC+++ |
|
|
all_m906_AAV28_RS21875_m1 |
AAV28_RS21875_m1 |
cluster_237 |
all |
11 |
13.07 |
350 |
GGATbbGGCAG |
CTGCCVVATCC |
|
|
all_m148_AAV28_RS03560_m3 |
AAV28_RS03560_m3 |
cluster_201 |
all |
20 |
15.28 |
796 |
++ACCCM-----TATGGGT+ |
+ACCCATA-----kGGGT++ |
|
|
all_m725_AAV28_RS17490_m5 |
AAV28_RS17490_m5 |
cluster_80 |
all |
16 |
11.82 |
123 |
AATTT-rATA++++++ |
++++++TATY-AAATT |
|
|
all_m346_AAV28_RS10255_m1 |
AAV28_RS10255_m1 |
cluster_300 |
all |
10 |
12.79 |
258 |
GACAsCGGCG |
CGCCGSTGTC |
|
|
all_m794_AAV28_RS18460_m4 |
AAV28_RS18460_m4 |
cluster_24 |
all |
33 |
34.66 |
273 |
++TCATATAATATATTATATCTGATAA++++++ |
++++++TTATCAGATATAATATATTATATGA++ |
|
|
all_m473_AAV28_RS12970_m3 |
AAV28_RS12970_m3 |
cluster_52 |
all |
16 |
19.77 |
378 |
+GCATGCTGCWTGCAA |
TTGCAwGCAGCATGC+ |
|
|
all_m1441_AAV28_RS36200_m1 |
AAV28_RS36200_m1 |
cluster_1 |
all |
26 |
23.58 |
635 |
+++TATTATAw-wAATATATTA++++ |
++++TAATATATTW-WTATAATA+++ |
|
|
all_m1249_AAV28_RS30740_m4 |
AAV28_RS30740_m4 |
cluster_75 |
all |
12 |
16.64 |
226 |
ACCCATAGCCAA |
TTGGCTATGGGT |
|
|
all_m781_AAV28_RS18380_m1 |
AAV28_RS18380_m1 |
cluster_29 |
all |
28 |
12.26 |
344 |
++CCTCY--------------CGCGC++ |
++GCGCG--------------rGAGG++ |
|
|
all_m868_AAV28_RS20945_m3 |
AAV28_RS20945_m3 |
cluster_59 |
all |
16 |
20.80 |
282 |
ATTTTWTTAATAAAAT |
ATTTTATTAAwAAAAT |
|
|
all_m480_AAV28_RS13025_m5 |
AAV28_RS13025_m5 |
cluster_157 |
all |
18 |
12.48 |
85 |
+TTTAC--------TTGC |
GCAA--------GTAAA+ |
|
|
all_m625_AAV28_RS15880_m5 |
AAV28_RS15880_m5 |
cluster_12 |
all |
14 |
10.04 |
548 |
++++ATATWTTA++ |
++TAAwATAT++++ |
|
|
all_m1183_AAV28_RS29020_m3 |
AAV28_RS29020_m3 |
cluster_17 |
all |
28 |
20.79 |
116 |
AAACAATT------------AAAAAAA+ |
+TTTTTTT------------AATTGTTT |
|
|
all_m491_AAV28_RS13450_m1 |
AAV28_RS13450_m1 |
cluster_8 |
all |
21 |
13.86 |
350 |
+++++++CCCTCCCGCA++++ |
++++TGCGGGAGGG+++++++ |
|
|
all_m5_AAV28_RS00905_m5 |
AAV28_RS00905_m5 |
cluster_7 |
all |
15 |
15.25 |
280 |
++CGCGATC-AGGT+ |
+ACCT-GATCGCG++ |
|
|
all_m8_AAV28_RS01065_m3 |
AAV28_RS01065_m3 |
cluster_196 |
all |
20 |
11.48 |
648 |
+GGCGC---------RCGG+ |
+CCGy---------GCGCC+ |
|
|
all_m1001_AAV28_RS23660_m1 |
AAV28_RS23660_m1 |
cluster_1 |
all |
26 |
18.02 |
97 |
++++++++TATATACTGTATA+++++ |
+++++TATACAGTATATA++++++++ |
|
|
all_m1190_AAV28_RS29085_m5 |
AAV28_RS29085_m5 |
cluster_191 |
all |
20 |
11.70 |
347 |
+++CATTB-------VAATG |
CATTb-------vAATG+++ |
|
|
all_m126_AAV28_RS02970_m1 |
AAV28_RS02970_m1 |
cluster_22 |
all |
18 |
13.86 |
350 |
+ATGAC-------TGACA |
TGTCA-------GTCAT+ |
|
|
all_m305_AAV28_RS08695_m5 |
AAV28_RS08695_m5 |
cluster_80 |
all |
16 |
9.70 |
176 |
+ATTT--ATA++++++ |
++++++TAT--AAAT+ |
|
|
all_m1527_AAV28_RS40400_m2 |
AAV28_RS40400_m2 |
cluster_307 |
all |
18 |
22.49 |
654 |
CTATAATATAd-TCAATA |
TATTGA-HTATATTATAG |
|
|
all_m1280_AAV28_RS31495_m5 |
AAV28_RS31495_m5 |
cluster_28 |
all |
17 |
13.86 |
263 |
ATGATA-----CATA++ |
++TATG-----TATCAT |
|
|
all_m812_AAV28_RS19440_m2 |
AAV28_RS19440_m2 |
cluster_5 |
all |
14 |
13.86 |
64 |
TAATCA----CGAA |
TTCG----TGATTA |
|
|
all_m1450_AAV28_RS36225_m5 |
AAV28_RS36225_m5 |
cluster_89 |
all |
11 |
12.48 |
117 |
++GATTTTTGC |
GCAAAAATC++ |
|
|
all_m599_AAV28_RS15625_m4 |
AAV28_RS15625_m4 |
cluster_123 |
all |
11 |
11.41 |
768 |
+AGGGvAAAG+ |
+CTTTBCCCT+ |
|
|
all_m892_AAV28_RS21550_m2 |
AAV28_RS21550_m2 |
cluster_118 |
all |
28 |
13.86 |
111 |
TCGCC------------------GCCAA |
TTGGC------------------GGCGA |
|
|
all_m93_AAV28_RS02555_m3 |
AAV28_RS02555_m3 |
cluster_146 |
all |
16 |
11.39 |
457 |
+GGGH------TCCTG |
CAGGA------dCCC+ |
|
|
all_m89_AAV28_RS02450_m4 |
AAV28_RS02450_m4 |
cluster_42 |
all |
30 |
40.20 |
159 |
TTTTTGAGGGGCGCAAAATTTTGGGTGCG+ |
+CGCACCCAAAATTTTGCGCCCCTCAAAAA |
|
|
all_m1475_AAV28_RS36930_m5 |
AAV28_RS36930_m5 |
cluster_12 |
all |
14 |
12.48 |
151 |
++++ATATATCAA+ |
+TTGATATAT++++ |
|
|
all_m1460_AAV28_RS36350_m5 |
AAV28_RS36350_m5 |
cluster_26 |
all |
21 |
19.74 |
279 |
ACCTGW------GTGTCAGGT |
ACCTGACAC------wCAGGT |
|
|
all_m521_AAV28_RS13855_m1 |
AAV28_RS13855_m1 |
cluster_14 |
all |
20 |
19.41 |
114 |
++CCCATT--CCCAAGGA++ |
++TCCTTGGG--AATGGG++ |
|
|
all_m436_AAV28_RS12120_m1 |
AAV28_RS12120_m1 |
cluster_103 |
all |
18 |
13.87 |
413 |
+GCGACs----yCGCG++ |
++CGCGR----SGTCGC+ |
|
|
all_m1501_AAV28_RS39075_m1 |
AAV28_RS39075_m1 |
cluster_125 |
all |
14 |
15.14 |
291 |
+GTTTCg-GAAAAG |
CTTTTC-CGAAAC+ |
|
|
all_m658_AAV28_RS16380_m3 |
AAV28_RS16380_m3 |
cluster_273 |
all |
28 |
15.95 |
98 |
CCCGAk----------------CTCGGG |
CCCGAG----------------MTCGGG |
|
|
all_m10_AAV28_RS01065_m5 |
AAV28_RS01065_m5 |
cluster_196 |
all |
20 |
19.41 |
350 |
+GGCGGAT-----TGACGCC |
GGCGTCA-----ATCCGCC+ |
|
|
all_m1268_AAV28_RS31410_m3 |
AAV28_RS31410_m3 |
cluster_275 |
all |
8 |
11.09 |
84 |
CGTCTGCG |
CGCAGACG |
|
|
all_m311_AAV28_RS09095_m1 |
AAV28_RS09095_m1 |
cluster_256 |
all |
12 |
14.60 |
226 |
GCAAGCwACTA+ |
+TAGTWGCTTGC |
|
|
all_m654_AAV28_RS16320_m4 |
AAV28_RS16320_m4 |
cluster_1 |
all |
26 |
22.20 |
333 |
+++++AAATATAwwTTATATTG++++ |
++++CAATATAAWWTATATTT+++++ |
|
|
all_m602_AAV28_RS15740_m2 |
AAV28_RS15740_m2 |
cluster_9 |
all |
32 |
34.66 |
236 |
+++++++AAATAAATATAAATTATATTTATTT |
AAATAAATATAATTTATATTTATTT+++++++ |
|
|
all_m1018_AAV28_RS24450_m3 |
AAV28_RS24450_m3 |
cluster_59 |
all |
16 |
18.02 |
350 |
+CTTCCTTAACCAT++ |
++ATGGTTAAGGAAG+ |
|
|
all_m1434_AAV28_RS36105_m4 |
AAV28_RS36105_m4 |
cluster_254 |
all |
27 |
9.70 |
59 |
CATT-------------------CGA+ |
+TCG-------------------AATG |
|
|
all_m917_AAV28_RS22250_m2 |
AAV28_RS22250_m2 |
cluster_199 |
all |
18 |
14.57 |
388 |
AATTTT-------RAATT |
AATTy-------AAAATT |
|
|
all_m1490_AAV28_RS38235_m5 |
AAV28_RS38235_m5 |
cluster_318 |
all |
11 |
10.06 |
141 |
AAA---gCTGG |
CCAGC---TTT |
|
|
all_m562_AAV28_RS14395_m2 |
AAV28_RS14395_m2 |
cluster_143 |
all |
20 |
13.86 |
87 |
+CACGC---------GCGAA |
TTCGC---------GCGTG+ |
|
|
all_m301_AAV28_RS08695_m1 |
AAV28_RS08695_m1 |
cluster_30 |
all |
17 |
19.02 |
662 |
+CAAAATTd-mAAAAAT |
ATTTTTK-HAATTTTG+ |
|
|
all_m1138_AAV28_RS28315_m3 |
AAV28_RS28315_m3 |
cluster_342 |
all |
16 |
22.18 |
350 |
GAATCTCGAAAATTAT |
ATAATTTTCGAGATTC |
|
|
all_m1402_AAV28_RS35015_m2 |
AAV28_RS35015_m2 |
cluster_320 |
all |
13 |
12.48 |
160 |
+CGAAGGAAA+++ |
+++TTTCCTTCG+ |
|
|
all_m581_AAV28_RS14920_m1 |
AAV28_RS14920_m1 |
cluster_62 |
all |
19 |
14.25 |
810 |
ACCGk-------GACGCT+ |
+AGCGTC-------MCGGT |
|
|
all_m1044_AAV28_RS25035_m4 |
AAV28_RS25035_m4 |
cluster_40 |
all |
20 |
16.64 |
350 |
+CCTGC------GCCGGCA+ |
+TGCCGGC------GCAGG+ |
|
|
all_m818_AAV28_RS19540_m3 |
AAV28_RS19540_m3 |
cluster_79 |
all |
28 |
13.17 |
112 |
CATGm-----------------GGCAA+ |
+TTGCC-----------------KCATG |
|
|
all_m1570_AAV28_RS45505_m5 |
AAV28_RS45505_m5 |
cluster_177 |
all |
24 |
9.70 |
128 |
++GGCG------------TTG+++ |
+++CAA------------CGCC++ |
|
|
all_m923_AAV28_RS22315_m3 |
AAV28_RS22315_m3 |
cluster_228 |
all |
18 |
9.70 |
74 |
TGGT-----------ACC |
GGT-----------ACCA |
|
|
all_m709_AAV28_RS17165_m4 |
AAV28_RS17165_m4 |
cluster_3 |
all |
16 |
18.02 |
242 |
GCGCCCCGGAATG+++ |
+++CATTCCGGGGCGC |
|
|
all_m1508_AAV28_RS39495_m3 |
AAV28_RS39495_m3 |
cluster_80 |
all |
16 |
12.48 |
85 |
+ATTTG-ATAG+++++ |
+++++CTAT-CAAAT+ |
|
|
all_m352_AAV28_RS10310_m2 |
AAV28_RS10310_m2 |
cluster_210 |
all |
11 |
12.48 |
350 |
CCCCTTAAC++ |
++GTTAAGGGG |
|
|
all_m1107_AAV28_RS26305_m2 |
AAV28_RS26305_m2 |
cluster_246 |
all |
12 |
11.87 |
496 |
+ATTGSCCCA++ |
++TGGGSCAAT+ |
|
|
all_m522_AAV28_RS13855_m2 |
AAV28_RS13855_m2 |
cluster_266 |
all |
10 |
11.09 |
95 |
+CCATTGTC+ |
+GACAATGG+ |
|
|
all_m1121_AAV28_RS27825_m1 |
AAV28_RS27825_m1 |
cluster_1 |
all |
26 |
17.65 |
249 |
+++++AATTw---hATATATGG++++ |
++++CCATATATD---WAATT+++++ |
|
|
all_m1016_AAV28_RS24450_m1 |
AAV28_RS24450_m1 |
cluster_59 |
all |
16 |
12.48 |
350 |
++++CGTTAACCA+++ |
+++TGGTTAACG++++ |
|
|
all_m1252_AAV28_RS31045_m2 |
AAV28_RS31045_m2 |
cluster_69 |
all |
12 |
16.07 |
180 |
GCAATGSAAAAT |
ATTTTSCATTGC |
|
|
all_m179_AAV28_RS05935_m4 |
AAV28_RS05935_m4 |
cluster_287 |
all |
10 |
13.86 |
74 |
GAGGAGATGA |
TCATCTCCTC |
|
|
all_m1429_AAV28_RS36070_m4 |
AAV28_RS36070_m4 |
cluster_187 |
all |
17 |
13.86 |
79 |
+CCCCC------CAAAC |
GTTTG------GGGGG+ |
|
|
all_m921_AAV28_RS22315_m1 |
AAV28_RS22315_m1 |
cluster_99 |
all |
14 |
18.02 |
117 |
+TTTGGTATCAAAA |
TTTTGATACCAAA+ |
|
|
all_m656_AAV28_RS16380_m1 |
AAV28_RS16380_m1 |
cluster_108 |
all |
14 |
13.86 |
85 |
+++TCGTCTCCCA+ |
+TGGGAGACGA+++ |
|
|
all_m1452_AAV28_RS36300_m2 |
AAV28_RS36300_m2 |
cluster_52 |
all |
16 |
20.79 |
304 |
CCTGCTGGCAGCAGG+ |
+CCTGCTGCCAGCAGG |
|
|
all_m1525_AAV28_RS40230_m5 |
AAV28_RS40230_m5 |
cluster_325 |
all |
14 |
15.25 |
63 |
ATAGTCGCAAA+++ |
+++TTTGCGACTAT |
|
|
all_m886_AAV28_RS21410_m1 |
AAV28_RS21410_m1 |
cluster_43 |
all |
29 |
15.25 |
100 |
+GAAACC----------------CGAAT+ |
+ATTCG----------------GGTTTC+ |
|
|
all_m632_AAV28_RS16085_m2 |
AAV28_RS16085_m2 |
cluster_70 |
all |
14 |
15.56 |
330 |
GCAGCGC--bCAAG |
CTTGV--GCGCTGC |
|
|
all_m1202_AAV28_RS29670_m2 |
AAV28_RS29670_m2 |
cluster_183 |
all |
11 |
9.70 |
77 |
CGA----GATC |
GATC----TCG |
|
|
all_m342_AAV28_RS09975_m2 |
AAV28_RS09975_m2 |
cluster_99 |
all |
14 |
11.82 |
153 |
+TTTGK-ATCA+++ |
+++TGAT-mCAAA+ |
|
|
all_m442_AAV28_RS12170_m2 |
AAV28_RS12170_m2 |
cluster_8 |
all |
21 |
12.48 |
350 |
++++++GGAGGGGGT++++++ |
++++++ACCCCCTCC++++++ |
|
|
all_m1047_AAV28_RS25120_m2 |
AAV28_RS25120_m2 |
cluster_1 |
all |
26 |
19.71 |
662 |
++++TATTATHTATATTAT+++++++ |
+++++++ATAATATAdATAATA++++ |
|
|
all_m974_AAV28_RS23160_m4 |
AAV28_RS23160_m4 |
cluster_272 |
all |
31 |
34.66 |
350 |
++++++TGATATTTCAATATATTATATCATT |
AATGATATAATATATTGAAATATCA++++++ |
|
|
all_m1241_AAV28_RS30630_m1 |
AAV28_RS30630_m1 |
cluster_159 |
all |
22 |
13.86 |
68 |
CGTCA------------ATAAC |
GTTAT------------TGACG |
|
|
all_m170_AAV28_RS05160_m5 |
AAV28_RS05160_m5 |
cluster_73 |
all |
16 |
19.41 |
173 |
GGCTACAC-GAACAA+ |
+TTGTTC-GTGTAGCC |
|
|
all_m933_AAV28_RS22385_m3 |
AAV28_RS22385_m3 |
cluster_65 |
all |
15 |
11.82 |
392 |
+ATGCK--MGACG++ |
++CGTCk--mGCAT+ |
|
|
all_m358_AAV28_RS10315_m3 |
AAV28_RS10315_m3 |
cluster_244 |
all |
10 |
11.79 |
101 |
GCACCKCAT+ |
+ATGmGGTGC |
|
|
all_m467_AAV28_RS12765_m2 |
AAV28_RS12765_m2 |
cluster_31 |
all |
14 |
16.64 |
350 |
++GGGAGGACGACG |
CGTCGTCCTCCC++ |
|
|
all_m1499_AAV28_RS38785_m4 |
AAV28_RS38785_m4 |
cluster_1 |
all |
26 |
9.01 |
86 |
++++++ATA-----RATT++++++++ |
++++++++AATy-----TAT++++++ |
|
|
all_m1463_AAV28_RS36460_m3 |
AAV28_RS36460_m3 |
cluster_217 |
all |
21 |
17.38 |
269 |
+++++++ATTTTSGAACTAT+ |
+ATAGTTCsAAAAT+++++++ |
|
|
all_m332_AAV28_RS09645_m2 |
AAV28_RS09645_m2 |
cluster_3 |
all |
16 |
16.64 |
73 |
++++CCCGGAATGACG |
CGTCATTCCGGG++++ |
|
|
all_m417_AAV28_RS11950_m2 |
AAV28_RS11950_m2 |
cluster_113 |
all |
18 |
14.57 |
236 |
TATCs-------TGGAAA |
TTTCCA-------SGATA |
|
|
all_m1009_AAV28_RS24040_m4 |
AAV28_RS24040_m4 |
cluster_89 |
all |
11 |
13.18 |
108 |
CGAWAATTTG+ |
+CAAATTwTCG |
|
|
all_m1430_AAV28_RS36070_m5 |
AAV28_RS36070_m5 |
cluster_19 |
all |
17 |
11.09 |
76 |
++++++CCCCCCAC+++ |
+++GTGGGGGG++++++ |
|
|
all_m37_AAV28_RS01975_m2 |
AAV28_RS01975_m2 |
cluster_60 |
all |
16 |
19.41 |
350 |
GCGACGAAACCATC++ |
++GATGGTTTCGTCGC |
|
|
all_m1352_AAV28_RS33490_m2 |
AAV28_RS33490_m2 |
cluster_8 |
all |
21 |
14.58 |
177 |
++++GCACC-kCTCCC+++++ |
+++++GGGAGM-GGTGC++++ |
|
|
all_m714_AAV28_RS17195_m4 |
AAV28_RS17195_m4 |
cluster_150 |
all |
21 |
11.09 |
63 |
+TTCGA---------TTT+++ |
+++AAA---------TCGAA+ |
|
|
all_m935_AAV28_RS22385_m5 |
AAV28_RS22385_m5 |
cluster_367 |
all |
11 |
11.13 |
392 |
ATCk--AGCAA |
TTGCT--MGAT |
|
|
all_m1086_AAV28_RS25875_m1 |
AAV28_RS25875_m1 |
cluster_12 |
all |
14 |
15.25 |
261 |
+++TATATTTTACA |
TGTAAAATATA+++ |
|
|
all_m825_AAV28_RS19565_m5 |
AAV28_RS19565_m5 |
cluster_4 |
all |
10 |
11.09 |
55 |
+AAGTCAAG+ |
+CTTGACTT+ |
|
|
all_m1405_AAV28_RS35015_m5 |
AAV28_RS35015_m5 |
cluster_86 |
all |
27 |
14.59 |
122 |
GGATTA----------------rATCC |
GGATY----------------TAATCC |
|
|
all_m1378_AAV28_RS33965_m3 |
AAV28_RS33965_m3 |
cluster_266 |
all |
10 |
11.09 |
207 |
GGACA-GCG+ |
+CGC-TGTCC |
|
|
all_m418_AAV28_RS11950_m3 |
AAV28_RS11950_m3 |
cluster_113 |
all |
18 |
15.25 |
204 |
TATCC-------TCGAAA |
TTTCGA-------GGATA |
|
|
all_m405_AAV28_RS11715_m5 |
AAV28_RS11715_m5 |
cluster_158 |
all |
12 |
12.48 |
71 |
GTTTGGTAT+++ |
+++ATACCAAAC |
|
|
all_m1319_AAV28_RS32430_m4 |
AAV28_RS32430_m4 |
cluster_145 |
all |
11 |
10.49 |
192 |
++CCGRGACC+ |
+GGTCYCGG++ |
|
|
all_m1124_AAV28_RS27825_m4 |
AAV28_RS27825_m4 |
cluster_222 |
all |
17 |
9.70 |
102 |
CCAA---------AAT+ |
+ATT---------TTGG |
|
|
all_m1184_AAV28_RS29020_m4 |
AAV28_RS29020_m4 |
cluster_17 |
all |
28 |
19.41 |
116 |
+AACAAAT-------------AAAAAAA |
TTTTTTT-------------ATTTGTT+ |
|
|
all_m721_AAV28_RS17490_m1 |
AAV28_RS17490_m1 |
cluster_120 |
all |
15 |
15.63 |
108 |
+++TAATTTYGATTA |
TAATCrAAATTA+++ |
|
|
all_m594_AAV28_RS15195_m4 |
AAV28_RS15195_m4 |
cluster_87 |
all |
16 |
22.18 |
209 |
CGCTGACAGGCACCTG |
CAGGTGCCTGTCAGCG |
|
|
all_m1262_AAV28_RS31195_m2 |
AAV28_RS31195_m2 |
cluster_174 |
all |
17 |
10.42 |
586 |
+CTCm------GGAA++ |
++TTCC------KGAG+ |
|
|
all_m530_AAV28_RS13860_m5 |
AAV28_RS13860_m5 |
cluster_207 |
all |
18 |
8.61 |
205 |
CCT----------dCAC+ |
+GTGH----------AGG |
|
|
all_m1034_AAV28_RS24605_m4 |
AAV28_RS24605_m4 |
cluster_368 |
all |
10 |
13.86 |
52 |
TCTCATAAAC |
GTTTATGAGA |
|
|
all_m1545_AAV28_RS41180_m5 |
AAV28_RS41180_m5 |
cluster_228 |
all |
18 |
18.02 |
133 |
GGTTCCC----GGAACC+ |
+GGTTCC----GGGAACC |
|
|
all_m1451_AAV28_RS36300_m1 |
AAV28_RS36300_m1 |
cluster_52 |
all |
16 |
11.80 |
538 |
+++GCTGk-rGCAT++ |
++ATGCY-MCAGC+++ |
|
|
all_m1118_AAV28_RS27630_m3 |
AAV28_RS27630_m3 |
cluster_91 |
all |
12 |
13.86 |
128 |
+AATGACATGA+ |
+TCATGTCATT+ |
|
|
all_m1359_AAV28_RS33735_m4 |
AAV28_RS33735_m4 |
cluster_57 |
all |
26 |
18.72 |
438 |
+CCCCCCCCy-----------CCCCG |
CGGGG-----------RGGGGGGGG+ |
|
|
all_m847_AAV28_RS20650_m2 |
AAV28_RS20650_m2 |
cluster_308 |
all |
16 |
13.86 |
245 |
+TTGAC----GTCAA+ |
+TTGAC----GTCAA+ |
|
|
all_m1417_AAV28_RS35785_m2 |
AAV28_RS35785_m2 |
cluster_262 |
all |
11 |
15.25 |
286 |
TACGCTACAAT |
ATTGTAGCGTA |
|
|
all_m489_AAV28_RS13260_m4 |
AAV28_RS13260_m4 |
cluster_38 |
all |
13 |
16.64 |
126 |
CATGCT-CGTATC |
GATACG-AGCATG |
|
|
all_m672_AAV28_RS16520_m2 |
AAV28_RS16520_m2 |
cluster_283 |
all |
19 |
18.02 |
164 |
+TTATTTATCGACA+++++ |
+++++TGTCGATAAATAA+ |
|
|
all_m826_AAV28_RS19675_m1 |
AAV28_RS19675_m1 |
cluster_28 |
all |
17 |
15.95 |
74 |
++GCTAGT---yATAGC |
GCTATR---ACTAGC++ |
|
|
all_m1206_AAV28_RS29730_m1 |
AAV28_RS29730_m1 |
cluster_72 |
all |
12 |
16.64 |
350 |
GAATAGATCATG |
CATGATCTATTC |
|
|
all_m1388_AAV28_RS34355_m3 |
AAV28_RS34355_m3 |
cluster_192 |
all |
15 |
11.09 |
164 |
+++TGAC----TTTT |
AAAA----GTCA+++ |
|
|
all_m1366_AAV28_RS33795_m1 |
AAV28_RS33795_m1 |
cluster_10 |
all |
21 |
16.66 |
422 |
+GGTTAAy------TTAACC+ |
+GGTTAA------RTTAACC+ |
|
|
all_m1295_AAV28_RS31840_m5 |
AAV28_RS31840_m5 |
cluster_1 |
all |
26 |
13.86 |
172 |
++++++AATT---ATTATA+++++++ |
+++++++TATAAT---AATT++++++ |
|
|
all_m631_AAV28_RS16085_m1 |
AAV28_RS16085_m1 |
cluster_136 |
all |
11 |
13.86 |
680 |
TTTTGsCAAAA |
TTTTGSCAAAA |
|
|
all_m647_AAV28_RS16270_m2 |
AAV28_RS16270_m2 |
cluster_157 |
all |
18 |
12.48 |
176 |
TTGA---------TTCCG |
CGGAA---------TCAA |
|
|
all_m765_AAV28_RS18030_m5 |
AAV28_RS18030_m5 |
cluster_74 |
all |
15 |
10.40 |
175 |
+TTTM-----ATAA+ |
+TTAT-----kAAA+ |
|
|
all_m565_AAV28_RS14395_m5 |
AAV28_RS14395_m5 |
cluster_143 |
all |
20 |
12.48 |
54 |
TGACG-----------CGAG |
CTCG-----------CGTCA |
|
|
all_m670_AAV28_RS16510_m5 |
AAV28_RS16510_m5 |
cluster_259 |
all |
18 |
16.64 |
139 |
++TCGACC----TTGCGG |
CCGCAA----GGTCGA++ |
|
|
all_m1169_AAV28_RS28920_m4 |
AAV28_RS28920_m4 |
cluster_1 |
all |
26 |
13.86 |
350 |
++++++ATTAT---ATATA+++++++ |
+++++++TATAT---ATAAT++++++ |
|
|
all_m1423_AAV28_RS36020_m3 |
AAV28_RS36020_m3 |
cluster_21 |
all |
13 |
15.25 |
350 |
++GGAACTTTTTT |
AAAAAAGTTCC++ |
|
|
all_m1225_AAV28_RS30335_m5 |
AAV28_RS30335_m5 |
cluster_59 |
all |
16 |
19.41 |
350 |
+TTTTGTTAACCATA+ |
+TATGGTTAACAAAA+ |
|
|
all_m957_AAV28_RS23030_m2 |
AAV28_RS23030_m2 |
cluster_36 |
all |
11 |
11.09 |
292 |
++GATTAACC+ |
+GGTTAATC++ |
|
|
all_m1556_AAV28_RS43455_m1 |
AAV28_RS43455_m1 |
cluster_71 |
all |
19 |
13.52 |
496 |
++++CCGGh---rGCCGG+ |
+CCGGCY---DCCGG++++ |
|
|
all_m344_AAV28_RS09975_m4 |
AAV28_RS09975_m4 |
cluster_288 |
all |
12 |
13.90 |
148 |
+GCGTCryCACG |
CGTGRYGACGC+ |
|
|
all_m1288_AAV28_RS31795_m3 |
AAV28_RS31795_m3 |
cluster_48 |
all |
19 |
9.70 |
81 |
+TGTG--------TCA+++ |
+++TGA--------CACA+ |
|
|
all_m546_AAV28_RS14175_m1 |
AAV28_RS14175_m1 |
cluster_19 |
all |
17 |
13.18 |
86 |
++++++CGCACyATAG+ |
+CTATRGTGCG++++++ |
|
|
all_m1002_AAV28_RS23660_m2 |
AAV28_RS23660_m2 |
cluster_1 |
all |
26 |
16.64 |
78 |
+++++++TGATACTATATA+++++++ |
+++++++TATATAGTATCA+++++++ |
|
|
all_m762_AAV28_RS18030_m2 |
AAV28_RS18030_m2 |
cluster_74 |
all |
15 |
13.54 |
409 |
TTATM---KGATAA+ |
+TTATCm---kATAA |
|
|
all_m105_AAV28_RS02645_m5 |
AAV28_RS02645_m5 |
cluster_117 |
all |
8 |
10.44 |
344 |
TATAyGCA |
TGCRTATA |
|
|
all_m486_AAV28_RS13260_m1 |
AAV28_RS13260_m1 |
cluster_38 |
all |
13 |
15.27 |
250 |
GATGCk-mGCATC |
GATGCK-MGCATC |
|
|
all_m795_AAV28_RS18460_m5 |
AAV28_RS18460_m5 |
cluster_12 |
all |
14 |
9.01 |
328 |
++TATMAGT+++++ |
+++++ACTkATA++ |
|
|
all_m540_AAV28_RS14135_m5 |
AAV28_RS14135_m5 |
cluster_12 |
all |
14 |
12.48 |
179 |
++++ATATATTAG+ |
+CTAATATAT++++ |
|
|
all_m1156_AAV28_RS28665_m1 |
AAV28_RS28665_m1 |
cluster_358 |
all |
9 |
12.48 |
259 |
AGCATCAAT |
ATTGATGCT |
|
|
all_m404_AAV28_RS11715_m4 |
AAV28_RS11715_m4 |
cluster_231 |
all |
26 |
9.27 |
252 |
+++ACC--------------GCCC++ |
++GGGC--------------GGT+++ |
|
|
all_m1380_AAV28_RS33965_m5 |
AAV28_RS33965_m5 |
cluster_170 |
all |
11 |
8.66 |
322 |
++ACA-gCGT+ |
+ACGC-TGT++ |
|
|
all_m640_AAV28_RS16150_m5 |
AAV28_RS16150_m5 |
cluster_6 |
all |
9 |
9.70 |
119 |
+CCA-TTTG |
CAAA-TGG+ |
|
|
all_m996_AAV28_RS23535_m1 |
AAV28_RS23535_m1 |
cluster_114 |
all |
10 |
11.78 |
336 |
+GCGGmGACG |
CGTCKCCGC+ |
|
|
all_m1302_AAV28_RS32075_m2 |
AAV28_RS32075_m2 |
cluster_64 |
all |
11 |
15.25 |
73 |
AGGGTTAGACA |
TGTCTAACCCT |
|
|
all_m1074_AAV28_RS25580_m4 |
AAV28_RS25580_m4 |
cluster_2 |
all |
19 |
22.18 |
350 |
+++GGAATCTCGAGATTCC |
GGAATCTCGAGATTCC+++ |
|
|
all_m1485_AAV28_RS37890_m5 |
AAV28_RS37890_m5 |
cluster_108 |
all |
14 |
18.77 |
135 |
TTTTCSGCCCTCAT |
ATGAGGGCsGAAAA |
|
|
all_m11_AAV28_RS01290_m1 |
AAV28_RS01290_m1 |
cluster_129 |
all |
27 |
14.95 |
419 |
CAAAAs---------------kGGGGG |
CCCCCM---------------STTTTG |
|
|
all_m636_AAV28_RS16150_m1 |
AAV28_RS16150_m1 |
cluster_160 |
all |
15 |
14.56 |
176 |
GCTGG----wCCAGA |
TCTGGW----CCAGC |
|
|
all_m624_AAV28_RS15880_m4 |
AAV28_RS15880_m4 |
cluster_249 |
all |
26 |
19.41 |
278 |
+++++++TTGAAATATATCAA+++++ |
+++++TTGATATATTTCAA+++++++ |
|
|
all_m674_AAV28_RS16520_m4 |
AAV28_RS16520_m4 |
cluster_39 |
all |
10 |
11.09 |
82 |
TGTCGATT++ |
++AATCGACA |
|
|
all_m288_AAV28_RS08150_m3 |
AAV28_RS08150_m3 |
cluster_274 |
all |
17 |
20.52 |
700 |
+CCCGCTGCGCTSCGGG |
CCCGsaGCGCAGCGGG+ |
|
|
all_m226_AAV28_RS07350_m1 |
AAV28_RS07350_m1 |
cluster_320 |
all |
13 |
18.02 |
208 |
GCGAAGCAAAGGT |
ACCTTTGCTTCGC |
|
|
all_m1075_AAV28_RS25580_m5 |
AAV28_RS25580_m5 |
cluster_49 |
all |
17 |
12.48 |
263 |
AGA----GGGTTC++++ |
++++GAACCC----TCT |
|
|
all_m183_AAV28_RS06055_m3 |
AAV28_RS06055_m3 |
cluster_11 |
all |
16 |
17.69 |
303 |
++AGAAACSGTTTTTG |
CAAAAAcsGTTTCT++ |
|
|
all_m1313_AAV28_RS32185_m3 |
AAV28_RS32185_m3 |
cluster_94 |
all |
10 |
13.86 |
143 |
GGGTTCGAGG |
CCTCGAACCC |
|
|
all_m507_AAV28_RS13620_m2 |
AAV28_RS13620_m2 |
cluster_186 |
all |
21 |
16.94 |
411 |
++++++CGATTDTATCGGA++ |
++TCCGATAhAATCG++++++ |
|
|
all_m508_AAV28_RS13620_m3 |
AAV28_RS13620_m3 |
cluster_186 |
all |
21 |
22.18 |
167 |
+++AATAAATTATATCGGA++ |
++TCCGATATAATTTATT+++ |
|
|
all_m1426_AAV28_RS36070_m1 |
AAV28_RS36070_m1 |
cluster_271 |
all |
22 |
27.41 |
251 |
+AAATCCCCCCChMCCCAACCC |
GGGTTGGGKDGGGGGGGATTT+ |
|
|
all_m1435_AAV28_RS36105_m5 |
AAV28_RS36105_m5 |
cluster_88 |
all |
11 |
12.48 |
59 |
CCGTCACAT++ |
++ATGTGACGG |
|
|
all_m469_AAV28_RS12765_m4 |
AAV28_RS12765_m4 |
cluster_99 |
all |
14 |
17.33 |
177 |
GATTk-TTCCAAAT |
ATTTGGAA-MAATC |
|
|
all_m575_AAV28_RS14710_m5 |
AAV28_RS14710_m5 |
cluster_109 |
all |
16 |
13.86 |
68 |
+CTCCT-----TCCGT |
ACGGA-----AGGAG+ |
|
|
all_m1106_AAV28_RS26305_m1 |
AAV28_RS26305_m1 |
cluster_168 |
all |
11 |
15.25 |
350 |
CATTGCCCGAA |
TTCGGGCAATG |
|
|
all_m939_AAV28_RS22405_m4 |
AAV28_RS22405_m4 |
cluster_128 |
all |
20 |
23.57 |
350 |
GTTCTTTTTTCTTTTAA+++ |
+++TTAAAAGAAAAAAGAAC |
|
|
all_m911_AAV28_RS21965_m1 |
AAV28_RS21965_m1 |
cluster_115 |
all |
10 |
12.48 |
350 |
GGCTTAACC+ |
+GGTTAAGCC |
|
|
all_m1286_AAV28_RS31795_m1 |
AAV28_RS31795_m1 |
cluster_12 |
all |
14 |
11.39 |
267 |
+++TATADATTA++ |
++TAAThTATA+++ |
|
|
all_m1504_AAV28_RS39075_m4 |
AAV28_RS39075_m4 |
cluster_125 |
all |
14 |
12.56 |
333 |
+ATTY-mGAAAA++ |
++TTTTCK-RAAT+ |
|
|
all_m1341_AAV28_RS33285_m1 |
AAV28_RS33285_m1 |
cluster_130 |
all |
18 |
15.94 |
207 |
+++AATAk---TATAATA |
TATTATA---MTATT+++ |
|
|
all_m526_AAV28_RS13860_m1 |
AAV28_RS13860_m1 |
cluster_207 |
all |
18 |
10.69 |
205 |
CCTk---------dCAAT |
ATTGH---------MAGG |
|
|
all_m908_AAV28_RS21875_m3 |
AAV28_RS21875_m3 |
cluster_229 |
all |
13 |
11.49 |
645 |
ACAAg--cTTGT+ |
+ACAAG--CTTGT |
|
|
all_m307_AAV28_RS08955_m2 |
AAV28_RS08955_m2 |
cluster_9 |
all |
32 |
33.27 |
350 |
++++++++AATCAATATAAAATATATTTTATC |
GATAAAATATATTTTATATTGATT++++++++ |
|
|
all_m899_AAV28_RS21665_m4 |
AAV28_RS21665_m4 |
cluster_1 |
all |
26 |
23.59 |
548 |
+++TATTATAw-wAATATATTA++++ |
++++TAATATATTW-WTATAATA+++ |
|
|
all_m1166_AAV28_RS28920_m1 |
AAV28_RS28920_m1 |
cluster_1 |
all |
26 |
24.98 |
700 |
++++TAAATATAwwTTATATTTA+++ |
+++TAAATATAAWWTATATTTA++++ |
|
|
all_m408_AAV28_RS11845_m3 |
AAV28_RS11845_m3 |
cluster_176 |
all |
28 |
8.32 |
350 |
+++++TAT--------------TAT+++ |
+++ATA--------------ATA+++++ |
|
|
all_m1346_AAV28_RS33335_m1 |
AAV28_RS33335_m1 |
cluster_11 |
all |
16 |
13.86 |
265 |
++++AAATATATTT++ |
++AAATATATTT++++ |
|
|
all_m314_AAV28_RS09095_m4 |
AAV28_RS09095_m4 |
cluster_339 |
all |
9 |
11.81 |
215 |
ACTAkCATT |
AATGMTAGT |
|
|
all_m1342_AAV28_RS33285_m2 |
AAV28_RS33285_m2 |
cluster_278 |
all |
18 |
14.59 |
216 |
GTTGTw-------ACAAC |
GTTGT-------WACAAC |
|
|
all_m1040_AAV28_RS24730_m5 |
AAV28_RS24730_m5 |
cluster_289 |
all |
17 |
18.12 |
513 |
GGCAAATy---KGCAAT |
ATTGCM---RATTTGCC |
|
|
all_m438_AAV28_RS12120_m3 |
AAV28_RS12120_m3 |
cluster_239 |
all |
16 |
9.70 |
350 |
GAC------CGCC+++ |
+++GGCG------GTC |
|
|
all_m1510_AAV28_RS39495_m5 |
AAV28_RS39495_m5 |
cluster_12 |
all |
14 |
9.34 |
176 |
+++TATWHATT+++ |
+++AATdwATA+++ |
|
|
all_m13_AAV28_RS01290_m3 |
AAV28_RS01290_m3 |
cluster_201 |
all |
20 |
16.64 |
162 |
CCCTGG------GGGTCC++ |
++GGACCC------CCAGGG |
|
|
all_m1006_AAV28_RS24040_m1 |
AAV28_RS24040_m1 |
cluster_89 |
all |
11 |
13.86 |
162 |
CAAATTATTG+ |
+CAATAATTTG |
|
|
all_m904_AAV28_RS21710_m4 |
AAV28_RS21710_m4 |
cluster_141 |
all |
14 |
15.55 |
296 |
GACGGGBGGGGG++ |
++CCCCCvCCCGTC |
|
|
all_m648_AAV28_RS16270_m3 |
AAV28_RS16270_m3 |
cluster_268 |
all |
13 |
13.17 |
171 |
+TCAAw-TTGAA+ |
+TTCAA-WTTGA+ |
|
|
all_m994_AAV28_RS23380_m4 |
AAV28_RS23380_m4 |
cluster_112 |
all |
25 |
12.48 |
67 |
AATGC---------------ATCA+ |
+TGAT---------------GCATT |
|
|
all_m617_AAV28_RS15830_m2 |
AAV28_RS15830_m2 |
cluster_164 |
all |
15 |
17.44 |
480 |
+CGCCGCSGGGCGG+ |
+CCGCCCSGCGGCG+ |
|
|
all_m1146_AAV28_RS28390_m1 |
AAV28_RS28390_m1 |
cluster_33 |
all |
24 |
18.06 |
525 |
ATATATAt-------hATATAT++ |
++ATATATD-------ATATATAT |
|
|
all_m1051_AAV28_RS25150_m1 |
AAV28_RS25150_m1 |
cluster_350 |
all |
19 |
12.81 |
481 |
++++TGAYTGACTA+++++ |
+++++TAGTCArTCA++++ |
|
|
all_m322_AAV28_RS09370_m2 |
AAV28_RS09370_m2 |
cluster_9 |
all |
32 |
29.43 |
648 |
+++++++AAAAAATAAAATTHATTTTATT+++ |
+++AATAAAATdAATTTTATTTTTT+++++++ |
|
|
all_m270_AAV28_RS07815_m5 |
AAV28_RS07815_m5 |
cluster_8 |
all |
21 |
12.48 |
56 |
++++++CCCCT-CCCC+++++ |
+++++GGGG-AGGGG++++++ |
|
|
all_m409_AAV28_RS11845_m4 |
AAV28_RS11845_m4 |
cluster_1 |
all |
26 |
8.32 |
350 |
++++++++TAT-----ATA+++++++ |
+++++++TAT-----ATA++++++++ |
|
|
all_m1514_AAV28_RS39675_m4 |
AAV28_RS39675_m4 |
cluster_49 |
all |
17 |
15.25 |
112 |
GAACCC----TCTCG++ |
++CGAGA----GGGTTC |
|
|
all_m185_AAV28_RS06055_m5 |
AAV28_RS06055_m5 |
cluster_11 |
all |
16 |
16.66 |
626 |
++GAAAGCABTTTTG+ |
+CAAAAvTGCTTTC++ |
|
|
all_m440_AAV28_RS12120_m5 |
AAV28_RS12120_m5 |
cluster_71 |
all |
19 |
20.40 |
357 |
CCGGCGGR-BCCGCCGC++ |
++GCGGCGGv-yCCGCCGG |
|
|
all_m1355_AAV28_RS33490_m5 |
AAV28_RS33490_m5 |
cluster_335 |
all |
26 |
10.68 |
330 |
+ATCGG-----------------CAC |
GTG-----------------CCGAT+ |
|
|
all_m446_AAV28_RS12315_m1 |
AAV28_RS12315_m1 |
cluster_144 |
all |
25 |
31.88 |
254 |
++TATTTGGCATGCCAAATGCCAGA |
TCTGGCATTTGGCATGCCAAATA++ |
|
|
all_m1518_AAV28_RS39745_m3 |
AAV28_RS39745_m3 |
cluster_291 |
all |
12 |
12.48 |
157 |
AATTCACAG+++ |
+++CTGTGAATT |
|
|
all_m1468_AAV28_RS36580_m3 |
AAV28_RS36580_m3 |
cluster_48 |
all |
19 |
12.49 |
109 |
++ATGAR-----YTCAT++ |
++ATGAr-----yTCAT++ |
|
|
all_m1052_AAV28_RS25150_m2 |
AAV28_RS25150_m2 |
cluster_350 |
all |
19 |
24.26 |
262 |
CTGAC-RGTCAGTCAATCA |
TGATTGACTGACy-GTCAG |
|
|
all_m954_AAV28_RS22935_m4 |
AAV28_RS22935_m4 |
cluster_261 |
all |
24 |
9.70 |
350 |
+GCGC--------------ACC++ |
++GGT--------------GCGC+ |
|
|
all_m1021_AAV28_RS24520_m1 |
AAV28_RS24520_m1 |
cluster_198 |
all |
24 |
12.50 |
108 |
GAAAM-----------KTTTC+++ |
+++GAAAm-----------kTTTC |
|
|
all_m928_AAV28_RS22335_m3 |
AAV28_RS22335_m3 |
cluster_7 |
all |
15 |
19.41 |
124 |
CGCGCGATCACGCG+ |
+CGCGTGATCGCGCG |
|
|
all_m953_AAV28_RS22935_m3 |
AAV28_RS22935_m3 |
cluster_369 |
all |
13 |
12.48 |
153 |
ACGGG----TGAA |
TTCA----CCCGT |
|
|
all_m1506_AAV28_RS39495_m1 |
AAV28_RS39495_m1 |
cluster_332 |
all |
11 |
12.48 |
123 |
TTATGCACA++ |
++TGTGCATAA |
|
|
all_m50_AAV28_RS02075_m5 |
AAV28_RS02075_m5 |
cluster_190 |
all |
27 |
9.70 |
197 |
+ATC-------------------GCCA |
TGGC-------------------GAT+ |
|
|
all_m1157_AAV28_RS28665_m2 |
AAV28_RS28665_m2 |
cluster_1 |
all |
26 |
13.92 |
365 |
+++++++TTATW--WTATAT++++++ |
++++++ATATAw--wATAA+++++++ |
|
|
all_m1551_AAV28_RS42435_m1 |
AAV28_RS42435_m1 |
cluster_156 |
all |
19 |
13.99 |
187 |
+CTTCR-----SGTGCC++ |
++GGCACs-----YGAAG+ |
|
|
all_m875_AAV28_RS21115_m5 |
AAV28_RS21115_m5 |
cluster_219 |
all |
11 |
14.61 |
305 |
GAATACYAGGA |
TCCTrGTATTC |
|
|
all_m1513_AAV28_RS39675_m3 |
AAV28_RS39675_m3 |
cluster_285 |
all |
26 |
11.79 |
70 |
+CCATy---------------GAAA+ |
+TTTC---------------RATGG+ |
|
|
all_m7_AAV28_RS01065_m2 |
AAV28_RS01065_m2 |
cluster_25 |
all |
12 |
12.48 |
183 |
GCAGTCGTC+++ |
+++GACGACTGC |
|
|
all_m1335_AAV28_RS32670_m5 |
AAV28_RS32670_m5 |
cluster_187 |
all |
17 |
14.56 |
164 |
GTGTY------CGGGGG |
CCCCCG------rACAC |
|
|
all_m338_AAV28_RS09930_m3 |
AAV28_RS09930_m3 |
cluster_67 |
all |
12 |
10.42 |
276 |
+TTTT---WTTC |
GAAw---AAAA+ |
|
|
all_m225_AAV28_RS07275_m5 |
AAV28_RS07275_m5 |
cluster_68 |
all |
27 |
15.38 |
229 |
TCGAY---------------rTCGTCG |
CGACGAY---------------RTCGA |
|
|
all_m513_AAV28_RS13725_m3 |
AAV28_RS13725_m3 |
cluster_125 |
all |
14 |
12.60 |
743 |
+GTTy-CAAAAA++ |
++TTTTTG-RAAC+ |
|
|
all_m1311_AAV28_RS32185_m1 |
AAV28_RS32185_m1 |
cluster_94 |
all |
10 |
13.86 |
143 |
GGGTTCGATG |
CATCGAACCC |
|
|
all_m736_AAV28_RS17775_m1 |
AAV28_RS17775_m1 |
cluster_56 |
all |
14 |
11.39 |
165 |
++AGCb---CCCAT |
ATGGG---VGCT++ |
|
|
all_m979_AAV28_RS23200_m4 |
AAV28_RS23200_m4 |
cluster_134 |
all |
22 |
12.48 |
135 |
+CTTGT------------CGCG |
CGCG------------ACAAG+ |
|
|
all_m808_AAV28_RS19140_m3 |
AAV28_RS19140_m3 |
cluster_3 |
all |
16 |
16.07 |
350 |
++++CCCGGWATCCAT |
ATGGATWCCGGG++++ |
|
|
all_m1191_AAV28_RS29365_m1 |
AAV28_RS29365_m1 |
cluster_216 |
all |
24 |
12.48 |
282 |
+CGGCG------------TCCG++ |
++CGGA------------CGCCG+ |
|
|
all_m496_AAV28_RS13495_m1 |
AAV28_RS13495_m1 |
cluster_130 |
all |
18 |
13.89 |
354 |
+++GATAyTCATAT++++ |
++++ATATGARTATC+++ |
|
|
all_m86_AAV28_RS02450_m1 |
AAV28_RS02450_m1 |
cluster_42 |
all |
30 |
24.20 |
264 |
+++++++++AATTTTGCGCv--bCAAAATT |
AATTTTGV--BGCGCAAAATT+++++++++ |
|
|
all_m1438_AAV28_RS36110_m3 |
AAV28_RS36110_m3 |
cluster_61 |
all |
11 |
9.70 |
225 |
TAC--AATT++ |
++AATT--GTA |
|
|
all_m103_AAV28_RS02645_m3 |
AAV28_RS02645_m3 |
cluster_81 |
all |
23 |
13.18 |
303 |
TATAT-----------yATAA++ |
++TTATR-----------ATATA |
|
|
all_m1420_AAV28_RS35785_m5 |
AAV28_RS35785_m5 |
cluster_95 |
all |
12 |
13.86 |
286 |
+AATGTAGCAA+ |
+TTGCTACATT+ |
|
|
all_m1332_AAV28_RS32670_m2 |
AAV28_RS32670_m2 |
cluster_209 |
all |
10 |
12.48 |
306 |
CTCG-TTCGG |
CCGAA-CGAG |
|
|
all_m27_AAV28_RS01725_m2 |
AAV28_RS01725_m2 |
cluster_101 |
all |
26 |
14.57 |
449 |
+++GCCGC----------sGCGGC++ |
++GCCGCS----------GCGGC+++ |
|
|
all_m4_AAV28_RS00905_m4 |
AAV28_RS00905_m4 |
cluster_7 |
all |
15 |
13.86 |
280 |
++CGCGATCGTG+++ |
+++CACGATCGCG++ |
|
|
all_m1541_AAV28_RS41180_m1 |
AAV28_RS41180_m1 |
cluster_171 |
all |
13 |
15.25 |
173 |
GTCTGTTCACT++ |
++AGTGAACAGAC |
|
|
all_m1248_AAV28_RS30740_m3 |
AAV28_RS30740_m3 |
cluster_39 |
all |
10 |
11.87 |
281 |
CTATSGATT+ |
+AATCSATAG |
|
|
all_m435_AAV28_RS11985_m5 |
AAV28_RS11985_m5 |
cluster_125 |
all |
14 |
15.25 |
138 |
AATTC--AAAAAA+ |
+TTTTTT--GAATT |
|
|
all_m1446_AAV28_RS36225_m1 |
AAV28_RS36225_m1 |
cluster_89 |
all |
11 |
15.25 |
185 |
TCGATTATTGC |
GCAATAATCGA |
|
|
all_m716_AAV28_RS17410_m1 |
AAV28_RS17410_m1 |
cluster_378 |
all |
17 |
23.57 |
267 |
CGCGGACGGACGATCCG |
CGGATCGTCCGTCCGCG |
|
|
all_m466_AAV28_RS12765_m1 |
AAV28_RS12765_m1 |
cluster_31 |
all |
14 |
16.64 |
350 |
++GGGAGGACGACA |
TGTCGTCCTCCC++ |
|
|
all_m720_AAV28_RS17410_m5 |
AAV28_RS17410_m5 |
cluster_84 |
all |
19 |
11.09 |
239 |
GCGG-------ATCG++++ |
++++CGAT-------CCGC |
|
|
all_m1273_AAV28_RS31420_m3 |
AAV28_RS31420_m3 |
cluster_221 |
all |
22 |
14.59 |
158 |
CCCCCy-----------CTCAT |
ATGAG-----------RGGGGG |
|
|
all_m368_AAV28_RS10450_m3 |
AAV28_RS10450_m3 |
cluster_194 |
all |
19 |
13.86 |
106 |
+++AACAAC----AAGA++ |
++TCTT----GTTGTT+++ |
|
|
all_m67_AAV28_RS02220_m2 |
AAV28_RS02220_m2 |
cluster_12 |
all |
14 |
11.86 |
221 |
+++TGAAWTATA++ |
++TATAWTTCA+++ |
|
|
all_m628_AAV28_RS15910_m3 |
AAV28_RS15910_m3 |
cluster_265 |
all |
13 |
12.48 |
119 |
CGCG---ATTTG+ |
+CAAAT---CGCG |
|
|
all_m988_AAV28_RS23295_m3 |
AAV28_RS23295_m3 |
cluster_7 |
all |
15 |
19.41 |
120 |
CGCGCGATCACGCG+ |
+CGCGTGATCGCGCG |
|
|
all_m1189_AAV28_RS29085_m4 |
AAV28_RS29085_m4 |
cluster_39 |
all |
10 |
10.08 |
643 |
CATYGATT++ |
++AATCrATG |
|
|
all_m571_AAV28_RS14710_m1 |
AAV28_RS14710_m1 |
cluster_35 |
all |
14 |
16.31 |
197 |
GGGAACCw-mGGGG |
CCCCK-WGGTTCCC |
|
|
all_m1017_AAV28_RS24450_m2 |
AAV28_RS24450_m2 |
cluster_59 |
all |
16 |
13.22 |
530 |
+GTTARCGAAG+++++ |
+++++CTTCGyTAAC+ |
|
|
all_m274_AAV28_RS08060_m4 |
AAV28_RS08060_m4 |
cluster_61 |
all |
11 |
12.48 |
100 |
AATTAGTTA++ |
++TAACTAATT |
|
|
all_m1393_AAV28_RS34825_m3 |
AAV28_RS34825_m3 |
cluster_253 |
all |
11 |
10.15 |
203 |
+CAGg-ATAG+ |
+CTAT-CCTG+ |
|
|
all_m370_AAV28_RS10450_m5 |
AAV28_RS10450_m5 |
cluster_194 |
all |
19 |
22.18 |
127 |
TCTTCTTTT-TGTTGCT++ |
++AGCAACA-AAAAGAAGA |
|
|
all_m1385_AAV28_RS34190_m5 |
AAV28_RS34190_m5 |
cluster_78 |
all |
20 |
11.09 |
105 |
+GCA----------TCTCC+ |
+GGAGA----------TGC+ |
|
|
all_m755_AAV28_RS17915_m5 |
AAV28_RS17915_m5 |
cluster_110 |
all |
17 |
11.09 |
294 |
+CCGC------CACC++ |
++GGTG------GCGG+ |
|
|
all_m90_AAV28_RS02450_m5 |
AAV28_RS02450_m5 |
cluster_42 |
all |
30 |
28.02 |
325 |
+++++++++AATTTTGCGCACCbCAAAATT |
AATTTTGVGGTGCGCAAAATT+++++++++ |
|
|
all_m748_AAV28_RS17810_m3 |
AAV28_RS17810_m3 |
cluster_67 |
all |
12 |
13.86 |
92 |
++AAACTATAAA |
TTTATAGTTT++ |
|
|
all_m52_AAV28_RS02140_m2 |
AAV28_RS02140_m2 |
cluster_258 |
all |
21 |
27.73 |
350 |
AGGGAGAGGGGGGAGGGGGT+ |
+ACCCCCTCCCCCCTCTCCCT |
|
|
all_m51_AAV28_RS02140_m1 |
AAV28_RS02140_m1 |
cluster_8 |
all |
21 |
11.21 |
700 |
++++++CCCCK-yCCC+++++ |
+++++GGGR-MGGGG++++++ |
|
|
all_m1058_AAV28_RS25155_m3 |
AAV28_RS25155_m3 |
cluster_131 |
all |
21 |
20.79 |
229 |
CCAATAG------ACTATTGG |
CCAATAGT------CTATTGG |
|
|
all_m693_AAV28_RS16610_m3 |
AAV28_RS16610_m3 |
cluster_266 |
all |
10 |
13.86 |
134 |
GGACAATCGG |
CCGATTGTCC |
|
|
all_m1233_AAV28_RS30560_m3 |
AAV28_RS30560_m3 |
cluster_31 |
all |
14 |
17.05 |
605 |
+CGGGAGAgCGACA |
TGTCGCTCTCCCG+ |
|
|
all_m776_AAV28_RS18325_m1 |
AAV28_RS18325_m1 |
cluster_284 |
all |
10 |
11.27 |
502 |
+GCCSSCGGA |
TCCGSSGGC+ |
|
|
all_m69_AAV28_RS02220_m4 |
AAV28_RS02220_m4 |
cluster_277 |
all |
16 |
9.70 |
173 |
++GCA-----ATTC++ |
++GAAT-----TGC++ |
|
|
all_m367_AAV28_RS10450_m2 |
AAV28_RS10450_m2 |
cluster_194 |
all |
19 |
17.39 |
159 |
++TTTTCK--GCTGTTT++ |
++AAACAGC--mGAAAA++ |
|
|
all_m335_AAV28_RS09645_m5 |
AAV28_RS09645_m5 |
cluster_135 |
all |
16 |
16.64 |
62 |
+++CCCGGAACACCG+ |
+CGGTGTTCCGGG+++ |
|
|
all_m390_AAV28_RS11580_m5 |
AAV28_RS11580_m5 |
cluster_227 |
all |
27 |
34.66 |
350 |
+GCGGGCCGGGCCGGCCGGGCGGGGG+ |
+CCCCCGCCCGGCCGGCCCGGCCCGC+ |
|
|
all_m959_AAV28_RS23030_m4 |
AAV28_RS23030_m4 |
cluster_10 |
all |
21 |
11.09 |
350 |
+TTAA---------AACC+++ |
+++GGTT---------TTAA+ |
|
|
all_m682_AAV28_RS16575_m2 |
AAV28_RS16575_m2 |
cluster_80 |
all |
16 |
13.86 |
121 |
GATATAAATA++++++ |
++++++TATTTATATC |
|
|
all_m667_AAV28_RS16510_m2 |
AAV28_RS16510_m2 |
cluster_7 |
all |
15 |
11.46 |
497 |
+++++GATCG-gCGG |
CCGC-CGATC+++++ |
|
|
all_m505_AAV28_RS13565_m5 |
AAV28_RS13565_m5 |
cluster_224 |
all |
13 |
14.05 |
456 |
TTTGTCtTGAT++ |
++ATCAAGACAAA |
|
|
all_m707_AAV28_RS17165_m2 |
AAV28_RS17165_m2 |
cluster_3 |
all |
16 |
18.02 |
242 |
GCGCCCCGCTATG+++ |
+++CATAGCGGGGCGC |
|
|
all_m1395_AAV28_RS34825_m5 |
AAV28_RS34825_m5 |
cluster_253 |
all |
11 |
9.70 |
97 |
++AGG--TAGT |
ACTA--CCT++ |
|
|
all_m841_AAV28_RS20595_m1 |
AAV28_RS20595_m1 |
cluster_223 |
all |
9 |
12.48 |
294 |
TCGCTCCCG |
CGGGAGCGA |
|
|
all_m924_AAV28_RS22315_m4 |
AAV28_RS22315_m4 |
cluster_99 |
all |
14 |
15.25 |
86 |
+++TGGTCTCAAAA |
TTTTGAGACCA+++ |
|
|
all_m1474_AAV28_RS36930_m4 |
AAV28_RS36930_m4 |
cluster_24 |
all |
33 |
42.98 |
239 |
+AATATGTAATATTATATATAATATATTACAT+ |
+ATGTAATATATTATATATAATATTACATATT+ |
|
|
all_m382_AAV28_RS11120_m2 |
AAV28_RS11120_m2 |
cluster_387 |
all |
20 |
27.73 |
304 |
TATTATATTGATTTTATATC |
GATATAAAATCAATATAATA |
|
|
all_m432_AAV28_RS11985_m2 |
AAV28_RS11985_m2 |
cluster_50 |
all |
17 |
20.12 |
269 |
TATTATAT--wATAATA |
TATTATW--ATATAATA |
|
|
all_m433_AAV28_RS11985_m3 |
AAV28_RS11985_m3 |
cluster_125 |
all |
14 |
13.86 |
138 |
AATTT---AAAAA+ |
+TTTTT---AAATT |
|
|
all_m711_AAV28_RS17195_m1 |
AAV28_RS17195_m1 |
cluster_150 |
all |
21 |
19.47 |
440 |
+TTCAAAm-----GGTTTGAA |
TTCAAACC-----KTTTGAA+ |
|
|
all_m516_AAV28_RS13850_m1 |
AAV28_RS13850_m1 |
cluster_293 |
all |
9 |
12.48 |
208 |
AAATTCGGC |
GCCGAATTT |
|
|
all_m1236_AAV28_RS30570_m1 |
AAV28_RS30570_m1 |
cluster_380 |
all |
16 |
17.33 |
353 |
ATGCTCs---AGGATC |
GATCCT---SGAGCAT |
|
|
all_m758_AAV28_RS17935_m3 |
AAV28_RS17935_m3 |
cluster_248 |
all |
29 |
9.01 |
141 |
+++ATG-------------------kGAC |
GTCM-------------------CAT+++ |
|
|
all_m1230_AAV28_RS30470_m5 |
AAV28_RS30470_m5 |
cluster_92 |
all |
10 |
13.86 |
350 |
TCGATCAAAC |
GTTTGATCGA |
|
|
all_m1563_AAV28_RS45430_m3 |
AAV28_RS45430_m3 |
cluster_128 |
all |
20 |
23.57 |
1400 |
+GAATTTG-NTTTTTTTTTT |
AAAAAAAAAAn-CAAATTC+ |
|
|
all_m645_AAV28_RS16200_m5 |
AAV28_RS16200_m5 |
cluster_102 |
all |
23 |
22.26 |
395 |
+++++GAAAw-wAATTCCACTTC |
GAAGTGGAATTW-WTTTC+++++ |
|
|
all_m125_AAV28_RS02840_m5 |
AAV28_RS02840_m5 |
cluster_208 |
all |
11 |
9.70 |
64 |
++TAACAAC++ |
++GTTGTTA++ |
|
|
all_m1109_AAV28_RS26305_m4 |
AAV28_RS26305_m4 |
cluster_168 |
all |
11 |
13.86 |
350 |
+CTTGCCCGAA |
TTCGGGCAAG+ |
|
|
all_m283_AAV28_RS08105_m3 |
AAV28_RS08105_m3 |
cluster_252 |
all |
15 |
11.82 |
196 |
CAATs-----yAGTA |
TACTR-----SATTG |
|
|
all_m846_AAV28_RS20650_m1 |
AAV28_RS20650_m1 |
cluster_8 |
all |
21 |
22.18 |
350 |
++CCCTCCTCCCCCCCCC+++ |
+++GGGGGGGGGAGGAGGG++ |
|
|
all_m1412_AAV28_RS35710_m2 |
AAV28_RS35710_m2 |
cluster_16 |
all |
23 |
19.77 |
273 |
AGCCTTC--------YGAAGGCT |
AGCCTTCR--------GAAGGCT |
|
|
all_m742_AAV28_RS17805_m2 |
AAV28_RS17805_m2 |
cluster_226 |
all |
27 |
11.09 |
20 |
+AATA------------------ACAG |
CTGT------------------TATT+ |
|
|
all_m1529_AAV28_RS40400_m4 |
AAV28_RS40400_m4 |
cluster_12 |
all |
14 |
9.01 |
461 |
++++++ATAwTAC+ |
+GTAWTAT++++++ |
|
|
all_m20_AAV28_RS01355_m5 |
AAV28_RS01355_m5 |
cluster_79 |
all |
28 |
13.20 |
557 |
CATGr-----------------GCCAA+ |
+TTGGC-----------------YCATG |
|
|
all_m852_AAV28_RS20670_m2 |
AAV28_RS20670_m2 |
cluster_98 |
all |
12 |
13.86 |
137 |
+TCGTCCGAGC+ |
+GCTCGGACGA+ |
|
|
all_m1433_AAV28_RS36105_m3 |
AAV28_RS36105_m3 |
cluster_291 |
all |
12 |
11.09 |
62 |
+AATGACGG+++ |
+++CCGTCATT+ |
|
|
all_m331_AAV28_RS09645_m1 |
AAV28_RS09645_m1 |
cluster_253 |
all |
11 |
15.25 |
83 |
CCCGGAATAGC |
GCTATTCCGGG |
|
|
all_m547_AAV28_RS14175_m2 |
AAV28_RS14175_m2 |
cluster_19 |
all |
17 |
11.38 |
119 |
+++++GCGCvCCAC+++ |
+++GTGGBGCGC+++++ |
|
|
all_m1031_AAV28_RS24605_m1 |
AAV28_RS24605_m1 |
cluster_213 |
all |
8 |
8.61 |
101 |
GATdAGA+ |
+TCTHATC |
|
|
all_m1265_AAV28_RS31195_m5 |
AAV28_RS31195_m5 |
cluster_19 |
all |
17 |
12.48 |
163 |
++++++CGCGCCATC++ |
++GATGGCGCG++++++ |
|
|
all_m733_AAV28_RS17680_m3 |
AAV28_RS17680_m3 |
cluster_140 |
all |
16 |
15.25 |
115 |
+++GGCAAACGCGG++ |
++CCGCGTTTGCC+++ |
|
|
all_m548_AAV28_RS14175_m3 |
AAV28_RS14175_m3 |
cluster_302 |
all |
9 |
12.48 |
49 |
ATAGTGCCG |
CGGCACTAT |
|
|
all_m1117_AAV28_RS27630_m2 |
AAV28_RS27630_m2 |
cluster_88 |
all |
11 |
9.02 |
224 |
++GTGWCAT++ |
++ATGwCAC++ |
|
|
all_m767_AAV28_RS18050_m2 |
AAV28_RS18050_m2 |
cluster_11 |
all |
16 |
11.16 |
852 |
++AAAAA---tTTG++ |
++CAAA---TTTTT++ |
|
|
all_m1371_AAV28_RS33845_m1 |
AAV28_RS33845_m1 |
cluster_119 |
all |
20 |
22.88 |
154 |
+++CAACmAAATGGTTGCAT |
ATGCAACCATTTKGTTG+++ |
|
|
all_m1369_AAV28_RS33795_m4 |
AAV28_RS33795_m4 |
cluster_358 |
all |
9 |
8.32 |
141 |
+GAATCA++ |
++TGATTC+ |
|
|
all_m394_AAV28_RS11595_m4 |
AAV28_RS11595_m4 |
cluster_341 |
all |
21 |
12.48 |
104 |
+++ACCT---------TCGAA |
TTCGA---------AGGT+++ |
|
|
all_m1492_AAV28_RS38375_m2 |
AAV28_RS38375_m2 |
cluster_105 |
all |
19 |
12.89 |
349 |
+GCGAW--------CAATC |
GATTG--------wTCGC+ |
|
|
all_m528_AAV28_RS13860_m3 |
AAV28_RS13860_m3 |
cluster_234 |
all |
18 |
13.47 |
206 |
CCTGTs-------dCAAA |
TTTGH-------SACAGG |
|
|
all_m958_AAV28_RS23030_m3 |
AAV28_RS23030_m3 |
cluster_10 |
all |
21 |
13.17 |
643 |
+GTTAAB-------KAAGG++ |
++CCTTm-------vTTAAC+ |
|
|
all_m788_AAV28_RS18390_m3 |
AAV28_RS18390_m3 |
cluster_112 |
all |
25 |
15.95 |
81 |
+TTCAT------------SAAGCAT |
ATGCTTs------------ATGAA+ |
|
|
all_m493_AAV28_RS13450_m3 |
AAV28_RS13450_m3 |
cluster_269 |
all |
17 |
23.57 |
350 |
TGCGGGAGAGAGAAAGA |
TCTTTCTCTCTCCCGCA |
|
|
all_m661_AAV28_RS16470_m1 |
AAV28_RS16470_m1 |
cluster_103 |
all |
18 |
14.56 |
191 |
GCGCR------GGTGCG+ |
+CGCACC------yGCGC |
|
|
all_m966_AAV28_RS23100_m1 |
AAV28_RS23100_m1 |
cluster_192 |
all |
15 |
15.97 |
321 |
CAGAAAwTTCTG+++ |
+++CAGAAWTTTCTG |
|
|
all_m497_AAV28_RS13495_m2 |
AAV28_RS13495_m2 |
cluster_336 |
all |
9 |
10.43 |
171 |
+AAACyCAG |
CTGRGTTT+ |
|
|
all_m280_AAV28_RS08065_m5 |
AAV28_RS08065_m5 |
cluster_301 |
all |
11 |
11.79 |
56 |
ATAAG--SCGC |
GCGs--CTTAT |
|
|
all_m1462_AAV28_RS36460_m2 |
AAV28_RS36460_m2 |
cluster_178 |
all |
21 |
18.33 |
521 |
++GTTCC---DTTCGGAAC++ |
++GTTCCGAAh---GGAAC++ |
|
|
all_m811_AAV28_RS19440_m1 |
AAV28_RS19440_m1 |
cluster_5 |
all |
14 |
11.09 |
64 |
TAAT------CGAA |
TTCG------ATTA |
|
|
all_m213_AAV28_RS06940_m3 |
AAV28_RS06940_m3 |
cluster_301 |
all |
11 |
8.32 |
53 |
++CAGCTT+++ |
+++AAGCTG++ |
|
|
all_m328_AAV28_RS09520_m3 |
AAV28_RS09520_m3 |
cluster_120 |
all |
15 |
15.25 |
166 |
+++AAATT-AAATTT |
AAATTT-AATTT+++ |
|
|
all_m1204_AAV28_RS29670_m4 |
AAV28_RS29670_m4 |
cluster_32 |
all |
21 |
19.47 |
105 |
CGCGTCAy------rTCAAAA |
TTTTGAY------RTGACGCG |
|
|
all_m476_AAV28_RS13025_m1 |
AAV28_RS13025_m1 |
cluster_209 |
all |
10 |
12.48 |
215 |
ATCGTTTCG+ |
+CGAAACGAT |
|
|
all_m688_AAV28_RS16595_m3 |
AAV28_RS16595_m3 |
cluster_23 |
all |
17 |
15.25 |
73 |
CCCCC------TTTCCC |
GGGAAA------GGGGG |
|
|
all_m813_AAV28_RS19440_m3 |
AAV28_RS19440_m3 |
cluster_5 |
all |
14 |
19.41 |
64 |
TAATCATACCCGAA |
TTCGGGTATGATTA |
|
|
all_m232_AAV28_RS07385_m2 |
AAV28_RS07385_m2 |
cluster_59 |
all |
16 |
22.18 |
350 |
ATTTGGTTAACCAAAT |
ATTTGGTTAACCAAAT |
|
|
all_m1142_AAV28_RS28385_m2 |
AAV28_RS28385_m2 |
cluster_45 |
all |
19 |
11.78 |
91 |
++TTAA------SGGAT++ |
++ATCCs------TTAA++ |
|
|
all_m14_AAV28_RS01290_m4 |
AAV28_RS01290_m4 |
cluster_35 |
all |
14 |
13.86 |
138 |
+++TACCCCAGGG+ |
+CCCTGGGGTA+++ |
|
|
all_m801_AAV28_RS18940_m1 |
AAV28_RS18940_m1 |
cluster_8 |
all |
21 |
16.98 |
699 |
+++++CCCCCk-CCCCAAG++ |
++CTTGGGG-MGGGGG+++++ |
|
|
all_m1555_AAV28_RS42435_m5 |
AAV28_RS42435_m5 |
cluster_225 |
all |
19 |
13.86 |
187 |
++GTCAC-------GAAGG |
CCTTC-------GTGAC++ |
|
|
all_m298_AAV28_RS08640_m3 |
AAV28_RS08640_m3 |
cluster_235 |
all |
18 |
12.48 |
39 |
+++GCACA-----CGGC+ |
+GCCG-----TGTGC+++ |
|
|
all_m1026_AAV28_RS24585_m1 |
AAV28_RS24585_m1 |
cluster_238 |
all |
17 |
11.80 |
125 |
GAAC--------wACAT |
ATGTW--------GTTC |
|
|
all_m132_AAV28_RS03045_m2 |
AAV28_RS03045_m2 |
cluster_100 |
all |
26 |
8.96 |
267 |
CTGs------------------bCGC |
GCGV------------------SCAG |
|
|
all_m294_AAV28_RS08350_m4 |
AAV28_RS08350_m4 |
cluster_46 |
all |
13 |
14.60 |
114 |
+CCCCC-MAATTC |
GAATTk-GGGGG+ |
|
|
all_m383_AAV28_RS11120_m3 |
AAV28_RS11120_m3 |
cluster_12 |
all |
14 |
9.70 |
271 |
++++ATA-ATTA++ |
++TAAT-TAT++++ |
|
|
all_m1324_AAV28_RS32435_m4 |
AAV28_RS32435_m4 |
cluster_118 |
all |
28 |
10.56 |
451 |
+TGCC-----------------CGCC++ |
++GGCG-----------------GGCA+ |
|
|
all_m538_AAV28_RS14135_m3 |
AAV28_RS14135_m3 |
cluster_71 |
all |
19 |
11.09 |
350 |
++++CCGG------CCGA+ |
+TCGG------CCGG++++ |
|
|
all_m425_AAV28_RS11965_m5 |
AAV28_RS11965_m5 |
cluster_74 |
all |
15 |
12.48 |
138 |
+ATTA-----ATAAT |
ATTAT-----TAAT+ |
|
|
all_m1112_AAV28_RS27295_m2 |
AAV28_RS27295_m2 |
cluster_233 |
all |
12 |
15.25 |
350 |
CGCCGCAAGCG+ |
+CGCTTGCGGCG |
|
|
all_m1251_AAV28_RS31045_m1 |
AAV28_RS31045_m1 |
cluster_69 |
all |
12 |
13.91 |
398 |
GCAAd-CAAAAT |
ATTTTG-HTTGC |
|
|